Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_012743.2
Length=62715
Score E
Sequences producing significant alignments: (Bits) Value
seq5432 95.1 5e-15
>seq5432
Length=1936
Score = 95.1 bits (104), Expect = 5e-15
Identities = 207/306 (68%), Gaps = 13/306 (4%)
Strand=Plus/Minus
Query 9120 GTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCGCTACCTCCCG 9179
|| ||||||||||| | ||||||| | |||| ||||| ||| ||| |||| ||
Sbjct 481 GTTAACAAAGTCATTTTGGTCGGCACTTGCGGCCAGGACCCTGAAGTTCGCCACCTGCCC 422
Query 9180 AGCGGCGACGCAATCTCCAATATCCGTCTCGCGACGACCGATCGCTACAAGGACAAGGCG 9239
| |||| |||| | |||| || | || || || | ||| | | | |||||| |
Sbjct 421 AACGGCAACGCGGTGACCAACCTCAGCCTGGCCACCAGCGAGCAGTGGACCGACAAGCAG 362
Query 9240 AGCGGCGAGTTCAAGGAAGTG---ACCGAGTGGCACCGCGTCGCTTTCTTCGGCCGCCTC 9296
| |||| || |||| | | |||||||||||||| || | | |||||| |
Sbjct 361 ACCGGCCAG---AAGGTCGAGCGTACCGAGTGGCACCGTGTTTCGATGTTCGGCAAGGTT 305
Query 9297 GCCGAGATCGTCGACGAGCACCTTCGCAAGGG--CGCATCGGTCTACATCGAGGGGCGCA 9354
|||||||| | || |||| |||| |||||||| |||| ||| |||||||||||
Sbjct 304 GCCGAGATTGCCGGCGAGTACCTGCGCAAGGGTTCGCA--GGTGTACATCGAGGGCAAGC 247
Query 9355 TCAAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGAGATCGTCG 9414
| |||| || |||| ||| | |||| | || ||||| ||||||||| |||
Sbjct 246 TGCAGACCCGCGAGTG---GGAAAAGGACGGCATCAAGCGTTACACCACCGAGATCATCG 190
Query 9415 CCGACA 9420
|||||
Sbjct 189 TCGACA 184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 200544842826360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |