Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq4628 127 3e-24
>seq4628
Length=2726
Score = 127 bits (140), Expect = 3e-24
Identities = 354/530 (67%), Gaps = 16/530 (3%)
Strand=Plus/Plus
Query 12545 CTCATTGAGGAGGTTCGCCAAGTCGGCACCAGAGAAGCCCGTCGTTTGCTTTGCGATGGC 12604
||| |||| ||||| |||| ||||||||| |||||||| | ||| ||||| |
Sbjct 1357 CTCGTTGACCAGGTTGGCCAGGTCGGCACCGGAGAAGCCGGGCGTACCACGGGCGATCAC 1416
Query 12605 GTGTAGCTTCACATCGTCAGCCAACTTCTTGTCTCGGGCGTGGACACCC--AAAATCTTC 12662
| | ||||| | ||| | | | | |||| | || || |||| | ||||| |
Sbjct 1417 GGCAGGGTTCACGTTGTCGCCGATCGGC--GTCTTGCGCATGTGCACCTTGAGAATCTGC 1474
Query 12663 TCGCGTCCGCGCACACTGGGTAGGGACACGGTGATCTTACGATCAAAGCGACCTGGGCGG 12722
||||| || || | ||| ||| |||| | | || || || || ||||| ||
Sbjct 1475 TCGCGACCACGGATGTCGGGCAGGCCCACGACCACTTGGCGGTCGAAACGGCCTGGACGC 1534
Query 12723 AGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTC 12782
|| | || |||||| | || ||||| || || ||||| || | |||||| |||
Sbjct 1535 AGCAACGCAGGGTCAAGCACGTCCGGACGGTTGGTAGCGGCGATCACGATGATGCC-GTC 1593
Query 12783 --TCGTTATCGAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCAT 12840
|| || |||||||| |||||||| || | || |||| ||| || || || || |
Sbjct 1594 GTTCATT-TCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTCTGCTCGCGCTCGT 1652
Query 12841 CATTCGCGGGCATACCA--CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCGTCAAT 12898
||| | | ||| || || | || || |||||||||||| |||||||| ||
Sbjct 1653 CATGACCA--CCGCCCATGCCGGCGCCACGGTGGCGACCGACGGCGTCGATTTCGTCGAT 1710
Query 12899 GAAAACGATACACGGTTGATT-TTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGG 12957
||| | ||| ||||| | ||| || | || | || || || || || | |||
Sbjct 1711 GAAGATGATGCACGGCGCGTGCTTCTTGGCCTGCT-CGAACATGTCACGTACACGGCTGG 1769
Query 12958 CACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACG 13016
||||||||||||| ||||| || || || | || ||||| || | || ||| || ||
Sbjct 1770 CACCGACACCCACGAACATTTCAACGAAGTCGGAACCGGAA-ATGGTGAAGAACGGCACC 1828
Query 13017 TTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGG 13066
|||| |||||||||||||| ||| || |||||||| || || || ||
Sbjct 1829 TTGGCCTCACCCGCGATGGCCTTGGCCAGCAGGGTCTTACCGGTACCGGG 1878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613449607011600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |