Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq4628 127 3e-24 >seq4628 Length=2726 Score = 127 bits (140), Expect = 3e-24 Identities = 354/530 (67%), Gaps = 16/530 (3%) Strand=Plus/Plus Query 12545 CTCATTGAGGAGGTTCGCCAAGTCGGCACCAGAGAAGCCCGTCGTTTGCTTTGCGATGGC 12604 ||| |||| ||||| |||| ||||||||| |||||||| | ||| ||||| | Sbjct 1357 CTCGTTGACCAGGTTGGCCAGGTCGGCACCGGAGAAGCCGGGCGTACCACGGGCGATCAC 1416 Query 12605 GTGTAGCTTCACATCGTCAGCCAACTTCTTGTCTCGGGCGTGGACACCC--AAAATCTTC 12662 | | ||||| | ||| | | | | |||| | || || |||| | ||||| | Sbjct 1417 GGCAGGGTTCACGTTGTCGCCGATCGGC--GTCTTGCGCATGTGCACCTTGAGAATCTGC 1474 Query 12663 TCGCGTCCGCGCACACTGGGTAGGGACACGGTGATCTTACGATCAAAGCGACCTGGGCGG 12722 ||||| || || | ||| ||| |||| | | || || || || ||||| || Sbjct 1475 TCGCGACCACGGATGTCGGGCAGGCCCACGACCACTTGGCGGTCGAAACGGCCTGGACGC 1534 Query 12723 AGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTC 12782 || | || |||||| | || ||||| || || ||||| || | |||||| ||| Sbjct 1535 AGCAACGCAGGGTCAAGCACGTCCGGACGGTTGGTAGCGGCGATCACGATGATGCC-GTC 1593 Query 12783 --TCGTTATCGAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCAT 12840 || || |||||||| |||||||| || | || |||| ||| || || || || | Sbjct 1594 GTTCATT-TCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTCTGCTCGCGCTCGT 1652 Query 12841 CATTCGCGGGCATACCA--CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCGTCAAT 12898 ||| | | ||| || || | || || |||||||||||| |||||||| || Sbjct 1653 CATGACCA--CCGCCCATGCCGGCGCCACGGTGGCGACCGACGGCGTCGATTTCGTCGAT 1710 Query 12899 GAAAACGATACACGGTTGATT-TTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGG 12957 ||| | ||| ||||| | ||| || | || | || || || || || | ||| Sbjct 1711 GAAGATGATGCACGGCGCGTGCTTCTTGGCCTGCT-CGAACATGTCACGTACACGGCTGG 1769 Query 12958 CACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACG 13016 ||||||||||||| ||||| || || || | || ||||| || | || ||| || || Sbjct 1770 CACCGACACCCACGAACATTTCAACGAAGTCGGAACCGGAA-ATGGTGAAGAACGGCACC 1828 Query 13017 TTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGG 13066 |||| |||||||||||||| ||| || |||||||| || || || || Sbjct 1829 TTGGCCTCACCCGCGATGGCCTTGGCCAGCAGGGTCTTACCGGTACCGGG 1878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613449607011600