Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_013693.1
Length=158006
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 140 3e-28
>seq2257
Length=8409
Score = 140 bits (154), Expect = 3e-28
Identities = 344/512 (67%), Gaps = 16/512 (3%)
Strand=Plus/Minus
Query 53559 GAACTTGTCAACGTCGGCGAAGTATGCTTCGTACATTTCGCGGTTGTCTTTCGGGTCGAA 53618
||||| ||| |||||| ||| | |||||||||| || | ||| | ||| |||
Sbjct 5988 GAACTCGTCCTGGTCGGCAAAGAAGGCTTCGTACAGGCCGGGCACGTCGTGCGGCGAGAA 5929
Query 53619 CAGATACAGA-GGCTGC--TTGGCAACCAGGCGCTCAAACATCACGCGGTTGATCTGAAT 53675
||| | | |||||| ||| | |||||||| ||| || ||||||||||||||
Sbjct 5928 CAGCGTGATATGGCTGCCCTTG---ATCAGGCGCTGGTACAGCAAGCGGTTGATCTGAAC 5872
Query 53676 ACCGTAGTCGATACGGCGTTCGCGGTTTTCTTCAGTGCCACGGTTATTCTTCAGTACAAC 53735
||||||||| | | || ||||||||||| |||||||| |||||||| || |
Sbjct 5871 ACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTCTTCAGAACCA- 5813
Query 53736 GACGTCATCGAACTGGTA-ATGCCACAGAGGGATGTACGCTGTCGCCGCACCACCACGAA 53794
| || | ||| | ||||||| ||| | || || |||||||||||||| |
Sbjct 5812 GCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAGGTTGCCGCACCACCACGCA 5753
Query 53795 TGCCGCCCTGGGAGCAAGACTTGAGCGC-CCCAGTGAGATACTTGATGAATGGGATCAGG 53853
|||||| || ||||| ||||| | ||| || | | || ||||| ||| || ||||
Sbjct 5752 CGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACAT-CTTGAAGAACGG---CAGG 5697
Query 53854 ---CCTGTGTGAACCATCTCTCCGCCGCGAATAGGACTGCCAATCCCACGGATAGCCCCG 53910
|| ||||| || || || ||||| ||||| | | || || ||
Sbjct 5696 CAACCCGTGTGTTGTGCTTCACCACCACGAATTTCGCTGCCTACGGCGCGAATGCGGCCA 5637
Query 53911 ACGTCAAAGCCGATACCCGCACGTTTGGACACATAGTCAACGATGGTCTTGGCCGTTGCG 53970
| | | |||||||| ||||| | ||||| || ||| |||| ||| ||| ||
Sbjct 5636 CCATTGATACCGATACCGGCACGCTGTGACACGTAACGAACAATGGCGCTGGTCGTGGCA 5577
Query 53971 TTGATAGAGTCCAGGGTGTCACCAGTTTTGATCAGGACACAGGAACTGAACTGACGGGTA 54030
||||| ||||||| |||| || || |||||| || || || |||||||| || ||
Sbjct 5576 TTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAACTGGCGAGTG 5517
Query 54031 GGAGTACGAACACCTGCCATAATCGGGGTGGG 54062
|| || || || || ||||| || || |||||
Sbjct 5516 GGTGTGCGCACGCCAGCCATGATGGGCGTGGG 5485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505443747013600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |