Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq2066 154 3e-32
seq5063 147 5e-30
seq4834 136 9e-27
seq7156 84.2 5e-11
>seq2066
Length=2850
Score = 154 bits (170), Expect = 3e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||||| || || ||||| |||||||| |||||||||| ||||||||| | ||| ||
Sbjct 1439 CGAAGTCGGAGAACCAGGTGAAGAGTCGATTCCTTTTGGATGTTGTAGTCCGACAATGTG 1498
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || ||||||||||||||||||||||| ||||| || || || ||| |||
Sbjct 1499 CGGCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGTTGATCTGGGGGAATGCCT 1558
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| ||| |||| |||||| | | ||| || || |
Sbjct 1559 TCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCCGAGGCTTCGACTTCGAGG 1618
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| ||||| | || ||||| || || ||
Sbjct 1619 GTGATCGTCTTGCCCGTCAAGGTCTTCACGAAGATCTG 1656
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| |||| ||||| ||||| ||||| || ||||| |||| ||||||||| | | ||
Sbjct 1211 CGGAGTCGAAGGACCAGGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCCGAGAGGGTT 1270
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||| ||||| ||||||||||||||||||||||| || ||||| || || |||||
Sbjct 1271 CGTCCGTCTTCGAGCTGCTTTCCGGCGAAGATGAGGCGTTGCTGATCTGGGGGGATTCCC 1330
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| ||| |||| ||| || | | || || || |
Sbjct 1331 TCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTATCCGAAGCCTCCACTTCGAGG 1390
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| || || || || ||||| || |||||
Sbjct 1391 GTGATCGTCTTGCCGGTCAGGGTCTTCACGAAGATTTG 1428
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | |||||| || |||||||| |||| ||||||||| | || || | |||||
Sbjct 1943 AGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCC 2002
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| || ||||||||||||||||| | |||||| || || || ||||||||| |||
Sbjct 2003 TCGAGTTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGAATTCCTTCCTTGTCC 2062
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| |||||| | | ||| || || | |||||||||
Sbjct 2063 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCCGAGGCTTCGACTTCGAGGGTGATCGTC 2122
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| | || ||||| || || ||
Sbjct 2123 TTGCCCGTCAAGGTCTTCACGAAGATCTG 2151
Score = 127 bits (140), Expect = 5e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||||| || || ||||| || || |||||||| |||| ||||||||| | | ||
Sbjct 850 CGAAGTCGAAGAACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTT 909
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||| ||||| ||||||||||||||||||||||| || ||||| || || |||||
Sbjct 910 CGTCCGTCTTCGAGCTGCTTTCCGGCGAAGATGAGGCGTTGCTGATCTGGGGGGATTCCC 969
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || || ||||| ||| ||| || | |||||| | | ||| || || |
Sbjct 970 TCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGGAGGCTTCGACTTCGAGA 1029
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| || || || || ||||| || || ||
Sbjct 1030 GTGATCGTCTTGCCGGTCAGGGTCTTCACGAAGATCTG 1067
Score = 114 bits (126), Expect = 3e-20
Identities = 146/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485
|||||| || |||||||| |||| ||||||||| | | ||| | ||||| || || ||
Sbjct 7 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCGAGTTG 66
Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545
|||||||||||||||||| ||||| || || || ||| ||||| || ||||||||
Sbjct 67 CTTTCCGGCGAAGATGAGGCGCTGTTGATCTGGGGGAATGCCTTCCTTGTCTTGAATCTT 126
Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605
||| || || | |||||| | | ||| || || | || |||||||| || ||
Sbjct 127 CGCCTTGACATTCTCAATGGTGTCAGAAGCTTCGACTTCGAGAGTTATCGTCTTGCCAGT 186
Query 199606 GAGAGTTTTCACAAAAATTTG 199626
| || ||||| || |||||
Sbjct 187 CAAGGTCTTCACGAAGATTTG 207
Score = 100 bits (110), Expect = 7e-16
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546
|| ||||| |||||||| |||||||| || ||| |||||||| ||||| |||||
Sbjct 343 TTACCGGCAAAGATGAGGCGCTGCTGATCTGGAGGGATTCCTTCCTTGTCCTGGATCTTG 402
Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606
|||||| |||| ||| || | | ||| || |||| ||||||||||| ||||||
Sbjct 403 GCCTTCACATTCTCGATGGTATCGGAAGCTTCGACCTCCAGAGTGATCGTCTTGCCCGTG 462
Query 199607 AGAGTTTTCACAAAAATTTG 199626
||||| ||||| || |||||
Sbjct 463 AGAGTCTTCACGAAGATTTG 482
>seq5063
Length=4177
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || |||||||| || |||||||| |||| ||||||||| | | ||| | |||||
Sbjct 2226 AGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCC 2285
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| || ||||||||||||||||| | ||||| || || || |||||||||| |||
Sbjct 2286 TCGAGTTGCTTTCCGGCGAAGATCAAGCGCTGTTGATCTGGGGGAATTCCTTCTTTGTCC 2345
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| ||||| | | ||| || || | |||||||||
Sbjct 2346 TGGATCTTGGCCTTGACGTTCTCGATCGTGTCGGAGGCTTCGACTTCGAGGGTGATCGTC 2405
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || |||||||| |||||||| |||||
Sbjct 2406 TTGCCGGTGAGAGTCTTCACAAAGATTTG 2434
Score = 141 bits (156), Expect = 2e-28
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| |||| || || ||||| |||||||| ||||| |||| ||||||||| | || ||
Sbjct 2593 CGGAGTCGGAGCACCAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCGACAGGGTG 2652
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || || ||||||||||||||||| | |||||| || || || |||||||
Sbjct 2653 CGGCCATCCTCGAGTTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGAATTCCT 2712
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| ||| |||| |||||| | | ||| || || |
Sbjct 2713 TCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAGGCTTCGACTTCGAGG 2772
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| || || || || ||||| || |||||
Sbjct 2773 GTGATCGTCTTGCCGGTCAGGGTCTTCACGAAGATTTG 2810
Score = 109 bits (120), Expect = 1e-18
Identities = 135/185 (73%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || ||||| ||||| |||||||| |||| ||||||||| | | ||| | || |||
Sbjct 1683 AGAACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGCCCGTCT 1742
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || || ||||| || |||||||| || || ||||| || |||
Sbjct 1743 TCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCGGGTGGGATTCCCTCCTTGTCC 1802
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| |||||| ||| | |||||| | | ||| || || | ||||| |||
Sbjct 1803 TGAATCTTGGCCTTCACATTTTCAATGGTGTCCGAGGCTTCGACTTCAAGAGTGATGGTC 1862
Query 199598 TTACC 199602
|| ||
Sbjct 1863 TTTCC 1867
Score = 105 bits (116), Expect = 2e-17
Identities = 120/161 (75%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| |||| || || | |||||| || |||||||| |||| ||||||||| | | ||
Sbjct 3160 CGGAGTCGGAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTA 3219
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||| ||||| |||||||||||||| |||||||| || |||||||| || ||||||
Sbjct 3220 CGTCCGTCTTCGAGCTGCTTTCCGGCAAAGATGAGGCGTTGCTGGTCTGGGGGGATTCCT 3279
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTC 199569
|| || || ||||| ||| ||| |||| ||||||
Sbjct 3280 TCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTC 3320
Score = 102 bits (112), Expect = 2e-16
Identities = 98/126 (78%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| ||||| |||||||| |||| |||||||| | | ||| | || |||
Sbjct 1913 AGGACGAGGTGAAGAGTGGACTCCTTCTGGATATTGTAGTCCGAGAGAGTGCGCCCGTCT 1972
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||||||||| |||||||| |||||||| || || ||||| || |||
Sbjct 1973 TCGAGCTGCTTTCCGGCAAAGATGAGGCGCTGCTGATCGGGTGGGATTCCCTCCTTGTCC 2032
Query 199538 TGAATC 199543
||||||
Sbjct 2033 TGAATC 2038
Score = 102 bits (112), Expect = 2e-16
Identities = 107/141 (76%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545
||| ||||| ||||| || |||||||| || ||| |||||||| ||||| |||||
Sbjct 3009 CTTACCGGCAAAGATCAGTCGCTGCTGATCTGGAGGGATTCCTTCCTTGTCCTGGATCTT 3068
Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605
| |||||| |||| ||| || | | ||| || |||| ||||||||||| |||||
Sbjct 3069 TGCCTTCACATTCTCGATGGTATCGGAAGCTTCGACCTCCAGAGTGATCGTCTTTCCCGT 3128
Query 199606 GAGAGTTTTCACAAAAATTTG 199626
|||||| ||||| || |||||
Sbjct 3129 GAGAGTCTTCACGAAGATTTG 3149
>seq4834
Length=88581
Score = 136 bits (150), Expect = 9e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || | ||||||||| |||||||| |||| ||||||||| | || ||
Sbjct 22324 CGAAGACGGAGAACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGATAACGTG 22383
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || || ||||||||||||||||||||||| || |||||||||||| || |||
Sbjct 22384 CGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGTTGCTGGTCCGGAGGGATGCCT 22443
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || |||||||| ||||||| |||| || || | | ||| || || |
Sbjct 22444 TCCTTATCTTGAATCTTCGCCTTCACGTTCTCGATAGTATCCGAGGCTTCGACTTCAAGG 22503
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || || || ||||| || || ||
Sbjct 22504 GTGATTGTCTTCCCGGTAAGCGTCTTCACGAAGATCTG 22541
Score = 122 bits (134), Expect = 2e-22
Identities = 100/122 (82%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || | |||||||| |||||||| |||| ||||||||| | ||||||
Sbjct 21711 CGAAGACGGAGTACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAAAGTT 21770
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
|| |||||||| ||||||||||||||||| ||||| ||||||||||| ||| || |||
Sbjct 21771 CTGCCATCTTCAAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCAGGAGGGATGCCT 21830
Query 199529 TC 199530
||
Sbjct 21831 TC 21832
Score = 93.3 bits (102), Expect = 1e-13
Identities = 78/96 (81%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | ||| || || |||||||| |||| ||||||||| | ||||| | || ||
Sbjct 22561 AGGACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGATAAAGTGCGACCGTCC 22620
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGG 199513
|| ||||||||||||||||||||||| || ||||||
Sbjct 22621 TCGAGCTGCTTTCCGGCGAAGATGAGGCGTTGCTGG 22656
Score = 89.7 bits (98), Expect = 1e-12
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994
|| || ||||||||||||||| | |||||||| || |||||| |||| |||||| |||||
Sbjct 21805 CTCATTTTCGCCGGAAAGCAGCTTGAAGATGGCAGAACTTTGTCCGACTACAACATCCAG 21746
Query 200995 AAAGAGTCTACTCTTCA 201011
|| ||||||||||| ||
Sbjct 21745 AAGGAGTCTACTCTCCA 21729
Score = 89.7 bits (98), Expect = 1e-12
Identities = 105/142 (74%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 199485 GCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCT 199544
|||| ||||||||||| || ||||||||||| ||| || ||||| ||||||||||
Sbjct 22922 GCTTACCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGAATCT 22981
Query 199545 TTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCG 199604
| ||| ||| ||||| |||||| | | || || || | ||||| ||||| || |
Sbjct 22982 TAGCCTTGACGTTTTCGATGGTGTCGGACGCCTCAACCTCAAGGGTGATGGTCTTTCCGG 23041
Query 199605 TGAGAGTTTTCACAAAAATTTG 199626
| |||||||| || || || ||
Sbjct 23042 TAAGAGTTTTGACGAAGATCTG 23063
>seq7156
Length=22399
Score = 84.2 bits (92), Expect = 5e-11
Identities = 75/94 (80%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | |||||||||||||| ||||||||||| |||| ||||||||| | || ||
Sbjct 9998 CGAAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTA 9939
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGA 199502
| ||||| || |||||||| || || || ||||
Sbjct 9938 CGGCCATCCTCGAGCTGCTTGCCTGCAAACATGA 9905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178808161953170
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