Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2592 197 1e-45 seq5063 134 1e-26 seq2066 125 7e-24 seq4834 109 5e-19 seq1762 89.7 5e-13 seq7156 86.0 6e-12 >seq2592 Length=18905 Score = 197 bits (218), Expect = 1e-45 Identities = 291/410 (71%), Gaps = 4/410 (1%) Strand=Plus/Plus Query 132729 GTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCAC 132788 |||||||||| |||| ||||| || ||||| ||| || | || | || ||| Sbjct 14882 GTCGGCCACGTACTCTATGTACTGGGACATTAGGCGGCAGTTCATGCCGATCATGTCCAC 14941 Query 132789 CGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCT 132848 || || ||||| || || | |||||||| ||| || ||| || ||| || | Sbjct 14942 GGGTAGGGCTTCTGTCAGGTACTCCTGCTCGATCTGGACGGCCTCGCGGATGATCTCGTT 15001 Query 132849 AACGCGCGCCGCGCTCGGCCGTTGCAC--CAAATGCTTGAACATCAAGCAAGCAAAGTCG 132906 || || | ||| ||| |||| | || | |||| |||| | ||| || |||||| Sbjct 15002 GACCTGCTTCTGGCTGGGC--TTGCTCTCCAGGTACTTGTACATGAGGCAGGCGAAGTCG 15059 Query 132907 CAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGG 132966 | || | ||| ||||||| ||| ||||||||||||||| || | ||||||||| ||| Sbjct 15060 CGGTGGAGGCCTTCGTCCCGGGAGATGAGTTCGTTGCTGTGGGTGAGGCCGGGCATCAGG 15119 Query 132967 CCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACG 133026 ||||| || |||||||| || ||||||||||| || || ||||||| ||| || ||| Sbjct 15120 CCGCGCTTCTTGAGCCAGAAGATGGCGGCGAAGGATCCGGAGAAGAAGATGCCTTCCACG 15179 Query 133027 GCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGC 133086 || ||||| || | || ||| ||||| | ||| | ||| | ||||||||||||| Sbjct 15180 GCGGCGAAGGCGATCACGCGGGTTCCGAAGGAGGCGTTCTTGTCGCCGATCCAGCGCAGT 15239 Query 133087 GCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAA 133136 ||||| |||||||| | |||| |||||| | | || |||||||| || Sbjct 15240 GCCCAGTCGGCCTTCTTCTTGATGCACGGGAACTCTTGTATGGCGTTGAA 15289 Score = 111 bits (122), Expect = 2e-19 Identities = 132/177 (75%), Gaps = 4/177 (2%) Strand=Plus/Plus Query 133184 TCGAATACATTTCCGAGTGTACG--TTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCG 133241 |||| ||||| |||||||| | | |||| || ||||| || |||| ||| ||| | | Sbjct 15459 TCGAGTACATCTCCGAGTGGATGCCTTCTACA--GCGATCTGGAAGCTGTAGAAGGAGAG 15516 Query 133242 CGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCC 133301 ||||||| || || || || || | ||| ||||| || || || ||||||||||| || Sbjct 15517 CGCCTCGGGCATCTTGACCTCCTGGGTGAAGCGCTCCACGAGGTTCTCGTTGACGATCCC 15576 Query 133302 GTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTT 133358 ||| ||||||||| ||||||||||| || |||||| |||||||| |||| Sbjct 15577 GTCCGAGGCGGCGAAGAAGGCCAGCACCCGCGAGATGAAGAACTGCTCGTTGGCGTT 15633 >seq5063 Length=4177 Score = 134 bits (148), Expect = 1e-26 Identities = 161/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || |||||| |||| ||||| ||| || Sbjct 2813 ATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACGATCACCCTCGAAGTCGAAGCCTCC 2754 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| || ||||||||| | || || Sbjct 2753 GACACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGATCA 2695 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | ||| || || || || || || | |||||||| |||||||| Sbjct 2694 ACAGCGTTTGATCTTCGCCGGAAAGCAACTCGAGGATGGCCGCACCCTGTCGGACTACAA 2635 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| |||||| |||| || || ||||||| || Sbjct 2634 CATCCAGAAGGAATCGACTCTTCACCTGGTGCTCCG 2599 Score = 125 bits (138), Expect = 7e-24 Identities = 160/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || || || || ||||| ||||| || |||||| |||| ||||| ||| | Sbjct 2438 AATGCAAATCTTTGTGAAGACTCTCACCGGCAAGACGATCACCCTCGAAGTCGAAGCCTC 2379 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 ||||| | | |||| | || | || |||| |||||||| ||||||||| | || | Sbjct 2378 CGACACGATCGAGAACG-TCAAGGCCAAGATCCAGGACAAAGAAGGAATTCCCCCAGATC 2320 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| | || | ||| || || || || || || | ||||| || |||||||| Sbjct 2319 AACAGCGCTTGATCTTCGCCGGAAAGCAACTCGAGGATGGCCGCACTCTTTCCGACTACA 2260 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| ||||| | || || || |||| || ||| Sbjct 2259 ACATCCAGAAGGAGTCTACCCTCCACCTGGTTCTTCGT 2222 Score = 102 bits (112), Expect = 8e-17 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 38271 GGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAA 38330 || || |||||||| | || ||||| ||| | |||| | | ||| | || | || Sbjct 1867 GGAAAGACCATCACTCTTGAAGTCGAAGCCTCGGACACCATTGAAAATGTGAAGGCCAAG 1808 Query 38331 ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAG 38390 || | ||||| |||||||| || |||| || ||||| || || | || ||||| ||| Sbjct 1807 ATTCAGGACAAGGAGGGAATCCCACCCGATCAGCAGCGCCTGATCTTTGCTGGCAAGCAG 1748 Query 38391 CTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTG 38450 || || |||| |||||| ||| ||||||||||||||| ||||| | || || || || Sbjct 1747 CTCGAAGACGGGCGCACTCTCTCCGACTACAACATCCAGAAGGAGTCCACTCTTCACCTG 1688 Query 38451 GTGCTGCGT 38459 || || ||| Sbjct 1687 GTTCTCCGT 1679 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| || ||||| ||| | ||||| || || ||||| | || || || Sbjct 3296 AAGATCCAAGACAAGGAAGGAATCCCCCCAGACCAGCAACGCCTCATCTTTGCCGGAAAG 3237 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 ||||| || |||| || |||||| |||||||||||||| ||||| | || || || Sbjct 3236 CAGCTCGAAGACGGACGTACCCTCTCGGACTACAACATCCAGAAGGAGTCCACCCTCCAC 3177 Query 38448 TTGGTGCTGCG 38458 ||||| || || Sbjct 3176 TTGGTTCTCCG 3166 >seq2066 Length=2850 Score = 125 bits (138), Expect = 7e-24 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | |||||||| || |||||| |||| ||||| ||| | Sbjct 1659 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACGATCACCCTCGAAGTCGAAGCCTCG 1600 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| || || |||||| | || || Sbjct 1599 GACACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCA 1541 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | ||| || || ||||| || || | ||||| | |||||||| Sbjct 1540 ACAGCGCCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACATTGTCGGACTACAA 1481 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||||||| |||| || || |||| || || Sbjct 1480 CATCCAAAAGGAATCGACTCTTCACCTGGTTCTCCG 1445 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| ||||| || || || || ||||| || |||||| |||| || ||||| | Sbjct 1432 AATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACGATCACCCTCGAAGTGGAGGCTTC 1373 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | |||| | || | || |||| ||||| |||||||| ||| | || | Sbjct 1372 GGATACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGATC 1314 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || ||||| | ||| || || ||||| || |||| || |||||| ||||||| Sbjct 1313 AGCAACGCCTCATCTTCGCCGGAAAGCAGCTCGAAGACGGACGAACCCTCTCGGACTACA 1254 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||| |||||| | || || || |||| || || Sbjct 1253 ACATCCAGAAGGAATCTACTCTTCACCTGGTCCTTCG 1217 Score = 122 bits (134), Expect = 9e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| || ||||| |||| ||||| ||| || Sbjct 1070 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACGATCACTCTCGAAGTCGAAGCCTCC 1011 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| |||||||| ||| | || || Sbjct 1010 GACACCATTGAGAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGAATCCCCCCAGATCA 952 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || ||||| | ||| || || ||||| || |||| || |||||| |||||||| Sbjct 951 GCAACGCCTCATCTTCGCCGGAAAGCAGCTCGAAGACGGACGAACCCTCTCGGACTACAA 892 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| | || || || |||| || || Sbjct 891 CATCCAGAAGGAGTCCACCCTTCACCTGGTTCTTCG 856 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | |||||||| || |||||| |||| ||||| ||| | Sbjct 2154 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACGATCACCCTCGAAGTCGAAGCCTCG 2095 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| || ||||||||| | || || Sbjct 2094 GACACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGATCA 2036 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | ||| || || || || || || | |||||||| |||||||| Sbjct 2035 ACAGCGTTTGATCTTCGCCGGAAAGCAACTCGAGGATGGCCGCACCCTGTCGGACTACAA 1976 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| | || || || ||||| || ||| Sbjct 1975 CATCCAGAAGGAGTCCACCCTCCACTTGGTTCTCCGT 1939 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| ||||| || || | || ||||| || || || |||| ||||| || | Sbjct 211 AATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACGATAACTCTCGAAGTCGAAGCTTC 152 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | | | || | || || | ||||| || || |||||| | || || Sbjct 151 TGACACCATTGAGAATGTCAAGGCGAAGATTCAAGACAAGGAAGGCATTCCCCCAGATCA 92 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | ||| || || || || || || | ||||| || |||||||| Sbjct 91 ACAGCGCCTCATCTTCGCCGGAAAGCAACTCGAGGATGGCCGCACTCTTTCGGACTACAA 32 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 |||||| ||||| | || || || ||||| Sbjct 31 CATCCAGAAGGAGTCCACCCTCCACTTGGT 2 >seq4834 Length=88581 Score = 109 bits (120), Expect = 5e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || |||||||| || || ||||||||| |||| ||||| || | Sbjct 21339 ATGCAAATCTTTGTCAAGACGCTCACCGGAAAGACCATCACCCTCGAAGTCGAAGCTTCG 21280 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || || | || || || || || || ||||||| Sbjct 21279 GACACAATCGAGAACG-TGAAGGCGAAGATTCAAGATAAGGAAGGCATCCCTCCCGACCA 21221 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | || || |||||||| || |||| || || || |||||||| Sbjct 21220 ACAGCGCCTCATCTTTGCCGGAAAACAGCTTGAGGACGGCCGTACTCTTTCAGACTACAA 21161 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || ||||| | || || || ||||| || ||| Sbjct 21160 CATTCAGAAGGAGTCTACTCTCCACTTGGTCCTCCGT 21124 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || || || || |||||| | || ||||| ||| | Sbjct 22544 ATGCAGATCTTCGTGAAGACGCTTACCGGGAAGACAATCACCCTTGAAGTCGAAGCCTCG 22485 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | |||| | || | || || | || || || || || || | ||||| Sbjct 22484 GATACTATCGAGAACG-TGAAGGCGAAGATTCAAGATAAGGAAGGCATCCCTCCGGACCA 22426 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || ||||| | ||| || || ||||| || |||| ||||| | ||||||||| Sbjct 22425 GCAACGCCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACGTTATCCGACTACAA 22366 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| | || || || ||||| || ||| | | ||||| Sbjct 22365 CATCCAGAAGGAGTCCACTCTCCACTTGGTTCTCCGTCTTCGTGGCGG 22318 >seq1762 Length=12899 Score = 89.7 bits (98), Expect = 5e-13 Identities = 116/160 (73%), Gaps = 3/160 (2%) Strand=Plus/Plus Query 69071 ACCACGCCGTGCTGCTGGTCGGCTACGGCGTCGAAAACGGCGTGCCCTACTGGGCGTTCA 69130 |||||||||| || || ||||||| ||||| ||| |||||| |||| |||| ||| Sbjct 435 ACCACGCCGTCCTCCTCGTCGGCTTCGGCGCCGAGGCCGGCGTCCCCTTCTGGATCGTCA 494 Query 69131 AAAACACGTGGGGTGACGACTGGGGCGAAAACGGCTATTTCCGCGTCCGCCAAAACATCA 69190 | |||| ||||| | |||||||||||| |||||| |||||| || || | || Sbjct 495 AGAACAGCTGGGGCGCCGACTGGGGCGAGGCCGGCTACTTCCGCATCTTCCGCGGCGGCA 554 Query 69191 ACGCGTGCGGCATGGTCAACGACCTGGCCTCCACCGCCGT 69230 || | |||||||| | | || || ||| || |||||| Sbjct 555 ACACTTGCGGCATCGCCGACAAC---GCCGTCAGCGCCGT 591 >seq7156 Length=22399 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || ||||| |||||||| |||| ||||||||| | Sbjct 9727 ATGCAGATTTTCGTCAAGACCTTGACTGGCAAGACCATCACTCTCGAGGTCGAGGCCTCT 9786 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | ||| | |||| || |||| || || |||||||||||| | ||||| Sbjct 9787 GACACCATCGAAAATGTCAAAGCCAAGATCCAAGATAAGGAGGGAATTCCCCCAGACCAG 9846 Query 38364 CAGCGGCTCATTTACGCGGG 38383 ||||| || || | ||| || Sbjct 9847 CAGCGCCTGATCTTCGCCGG 9866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500125846278400