Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq2592 197 1e-45
seq5063 134 1e-26
seq2066 125 7e-24
seq4834 109 5e-19
seq1762 89.7 5e-13
seq7156 86.0 6e-12
>seq2592
Length=18905
Score = 197 bits (218), Expect = 1e-45
Identities = 291/410 (71%), Gaps = 4/410 (1%)
Strand=Plus/Plus
Query 132729 GTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCAC 132788
|||||||||| |||| ||||| || ||||| ||| || | || | || |||
Sbjct 14882 GTCGGCCACGTACTCTATGTACTGGGACATTAGGCGGCAGTTCATGCCGATCATGTCCAC 14941
Query 132789 CGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCT 132848
|| || ||||| || || | |||||||| ||| || ||| || ||| || |
Sbjct 14942 GGGTAGGGCTTCTGTCAGGTACTCCTGCTCGATCTGGACGGCCTCGCGGATGATCTCGTT 15001
Query 132849 AACGCGCGCCGCGCTCGGCCGTTGCAC--CAAATGCTTGAACATCAAGCAAGCAAAGTCG 132906
|| || | ||| ||| |||| | || | |||| |||| | ||| || ||||||
Sbjct 15002 GACCTGCTTCTGGCTGGGC--TTGCTCTCCAGGTACTTGTACATGAGGCAGGCGAAGTCG 15059
Query 132907 CAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGG 132966
| || | ||| ||||||| ||| ||||||||||||||| || | ||||||||| |||
Sbjct 15060 CGGTGGAGGCCTTCGTCCCGGGAGATGAGTTCGTTGCTGTGGGTGAGGCCGGGCATCAGG 15119
Query 132967 CCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACG 133026
||||| || |||||||| || ||||||||||| || || ||||||| ||| || |||
Sbjct 15120 CCGCGCTTCTTGAGCCAGAAGATGGCGGCGAAGGATCCGGAGAAGAAGATGCCTTCCACG 15179
Query 133027 GCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGC 133086
|| ||||| || | || ||| ||||| | ||| | ||| | |||||||||||||
Sbjct 15180 GCGGCGAAGGCGATCACGCGGGTTCCGAAGGAGGCGTTCTTGTCGCCGATCCAGCGCAGT 15239
Query 133087 GCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAA 133136
||||| |||||||| | |||| |||||| | | || |||||||| ||
Sbjct 15240 GCCCAGTCGGCCTTCTTCTTGATGCACGGGAACTCTTGTATGGCGTTGAA 15289
Score = 111 bits (122), Expect = 2e-19
Identities = 132/177 (75%), Gaps = 4/177 (2%)
Strand=Plus/Plus
Query 133184 TCGAATACATTTCCGAGTGTACG--TTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCG 133241
|||| ||||| |||||||| | | |||| || ||||| || |||| ||| ||| | |
Sbjct 15459 TCGAGTACATCTCCGAGTGGATGCCTTCTACA--GCGATCTGGAAGCTGTAGAAGGAGAG 15516
Query 133242 CGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCC 133301
||||||| || || || || || | ||| ||||| || || || ||||||||||| ||
Sbjct 15517 CGCCTCGGGCATCTTGACCTCCTGGGTGAAGCGCTCCACGAGGTTCTCGTTGACGATCCC 15576
Query 133302 GTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTT 133358
||| ||||||||| ||||||||||| || |||||| |||||||| ||||
Sbjct 15577 GTCCGAGGCGGCGAAGAAGGCCAGCACCCGCGAGATGAAGAACTGCTCGTTGGCGTT 15633
>seq5063
Length=4177
Score = 134 bits (148), Expect = 1e-26
Identities = 161/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || |||||| |||| ||||| ||| ||
Sbjct 2813 ATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACGATCACCCTCGAAGTCGAAGCCTCC 2754
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| || ||||||||| | || ||
Sbjct 2753 GACACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGATCA 2695
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||| | || | ||| || || || || || || | |||||||| ||||||||
Sbjct 2694 ACAGCGTTTGATCTTCGCCGGAAAGCAACTCGAGGATGGCCGCACCCTGTCGGACTACAA 2635
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||| |||||| |||| || || ||||||| ||
Sbjct 2634 CATCCAGAAGGAATCGACTCTTCACCTGGTGCTCCG 2599
Score = 125 bits (138), Expect = 7e-24
Identities = 160/218 (73%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
||||||||| || || || || ||||| ||||| || |||||| |||| ||||| ||| |
Sbjct 2438 AATGCAAATCTTTGTGAAGACTCTCACCGGCAAGACGATCACCCTCGAAGTCGAAGCCTC 2379
Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
||||| | | |||| | || | || |||| |||||||| ||||||||| | || |
Sbjct 2378 CGACACGATCGAGAACG-TCAAGGCCAAGATCCAGGACAAAGAAGGAATTCCCCCAGATC 2320
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
||||||| | || | ||| || || || || || || | ||||| || ||||||||
Sbjct 2319 AACAGCGCTTGATCTTCGCCGGAAAGCAACTCGAGGATGGCCGCACTCTTTCCGACTACA 2260
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||| ||||| | || || || |||| || |||
Sbjct 2259 ACATCCAGAAGGAGTCTACCCTCCACCTGGTTCTTCGT 2222
Score = 102 bits (112), Expect = 8e-17
Identities = 136/189 (72%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 38271 GGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAA 38330
|| || |||||||| | || ||||| ||| | |||| | | ||| | || | ||
Sbjct 1867 GGAAAGACCATCACTCTTGAAGTCGAAGCCTCGGACACCATTGAAAATGTGAAGGCCAAG 1808
Query 38331 ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAG 38390
|| | ||||| |||||||| || |||| || ||||| || || | || ||||| |||
Sbjct 1807 ATTCAGGACAAGGAGGGAATCCCACCCGATCAGCAGCGCCTGATCTTTGCTGGCAAGCAG 1748
Query 38391 CTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTG 38450
|| || |||| |||||| ||| ||||||||||||||| ||||| | || || || ||
Sbjct 1747 CTCGAAGACGGGCGCACTCTCTCCGACTACAACATCCAGAAGGAGTCCACTCTTCACCTG 1688
Query 38451 GTGCTGCGT 38459
|| || |||
Sbjct 1687 GTTCTCCGT 1679
Score = 84.2 bits (92), Expect = 2e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387
|| |||| ||||| || ||||| ||| | ||||| || || ||||| | || || ||
Sbjct 3296 AAGATCCAAGACAAGGAAGGAATCCCCCCAGACCAGCAACGCCTCATCTTTGCCGGAAAG 3237
Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447
||||| || |||| || |||||| |||||||||||||| ||||| | || || ||
Sbjct 3236 CAGCTCGAAGACGGACGTACCCTCTCGGACTACAACATCCAGAAGGAGTCCACCCTCCAC 3177
Query 38448 TTGGTGCTGCG 38458
||||| || ||
Sbjct 3176 TTGGTTCTCCG 3166
>seq2066
Length=2850
Score = 125 bits (138), Expect = 7e-24
Identities = 159/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | |||||||| || |||||| |||| ||||| ||| |
Sbjct 1659 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACGATCACCCTCGAAGTCGAAGCCTCG 1600
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| || || |||||| | || ||
Sbjct 1599 GACACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCA 1541
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||| ||||| | ||| || || ||||| || || | ||||| | ||||||||
Sbjct 1540 ACAGCGCCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACATTGTCGGACTACAA 1481
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||||||||||| |||| || || |||| || ||
Sbjct 1480 CATCCAAAAGGAATCGACTCTTCACCTGGTTCTCCG 1445
Score = 123 bits (136), Expect = 2e-23
Identities = 159/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
||||||||| ||||| || || || || ||||| || |||||| |||| || ||||| |
Sbjct 1432 AATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACGATCACCCTCGAAGTGGAGGCTTC 1373
Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|| | | | | |||| | || | || |||| ||||| |||||||| ||| | || |
Sbjct 1372 GGATACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGATC 1314
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| || || ||||| | ||| || || ||||| || |||| || |||||| |||||||
Sbjct 1313 AGCAACGCCTCATCTTCGCCGGAAAGCAGCTCGAAGACGGACGAACCCTCTCGGACTACA 1254
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||||| |||||| | || || || |||| || ||
Sbjct 1253 ACATCCAGAAGGAATCTACTCTTCACCTGGTCCTTCG 1217
Score = 122 bits (134), Expect = 9e-23
Identities = 158/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| || ||||| |||| ||||| ||| ||
Sbjct 1070 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACGATCACTCTCGAAGTCGAAGCCTCC 1011
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| |||||||| ||| | || ||
Sbjct 1010 GACACCATTGAGAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGAATCCCCCCAGATCA 952
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| || ||||| | ||| || || ||||| || |||| || |||||| ||||||||
Sbjct 951 GCAACGCCTCATCTTCGCCGGAAAGCAGCTCGAAGACGGACGAACCCTCTCGGACTACAA 892
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||| ||||| | || || || |||| || ||
Sbjct 891 CATCCAGAAGGAGTCCACCCTTCACCTGGTTCTTCG 856
Score = 118 bits (130), Expect = 1e-21
Identities = 158/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | |||||||| || |||||| |||| ||||| ||| |
Sbjct 2154 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACGATCACCCTCGAAGTCGAAGCCTCG 2095
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| || ||||||||| | || ||
Sbjct 2094 GACACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGATCA 2036
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||| | || | ||| || || || || || || | |||||||| ||||||||
Sbjct 2035 ACAGCGTTTGATCTTCGCCGGAAAGCAACTCGAGGATGGCCGCACCCTGTCGGACTACAA 1976
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| | || || || ||||| || |||
Sbjct 1975 CATCCAGAAGGAGTCCACCCTCCACTTGGTTCTCCGT 1939
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
||||||||| ||||| || || | || ||||| || || || |||| ||||| || |
Sbjct 211 AATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACGATAACTCTCGAAGTCGAAGCTTC 152
Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | | | || | || || | ||||| || || |||||| | || ||
Sbjct 151 TGACACCATTGAGAATGTCAAGGCGAAGATTCAAGACAAGGAAGGCATTCCCCCAGATCA 92
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||| ||||| | ||| || || || || || || | ||||| || ||||||||
Sbjct 91 ACAGCGCCTCATCTTCGCCGGAAAGCAACTCGAGGATGGCCGCACTCTTTCGGACTACAA 32
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGT 38452
|||||| ||||| | || || || |||||
Sbjct 31 CATCCAGAAGGAGTCCACCCTCCACTTGGT 2
>seq4834
Length=88581
Score = 109 bits (120), Expect = 5e-19
Identities = 156/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || |||||||| || || ||||||||| |||| ||||| || |
Sbjct 21339 ATGCAAATCTTTGTCAAGACGCTCACCGGAAAGACCATCACCCTCGAAGTCGAAGCTTCG 21280
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || || | || || || || || || |||||||
Sbjct 21279 GACACAATCGAGAACG-TGAAGGCGAAGATTCAAGATAAGGAAGGCATCCCTCCCGACCA 21221
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||| ||||| | || || |||||||| || |||| || || || ||||||||
Sbjct 21220 ACAGCGCCTCATCTTTGCCGGAAAACAGCTTGAGGACGGCCGTACTCTTTCAGACTACAA 21161
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||| || ||||| | || || || ||||| || |||
Sbjct 21160 CATTCAGAAGGAGTCTACTCTCCACTTGGTCCTCCGT 21124
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || ||||| || || || || |||||| | || ||||| ||| |
Sbjct 22544 ATGCAGATCTTCGTGAAGACGCTTACCGGGAAGACAATCACCCTTGAAGTCGAAGCCTCG 22485
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | |||| | || | || || | || || || || || || | |||||
Sbjct 22484 GATACTATCGAGAACG-TGAAGGCGAAGATTCAAGATAAGGAAGGCATCCCTCCGGACCA 22426
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| || ||||| | ||| || || ||||| || |||| ||||| | |||||||||
Sbjct 22425 GCAACGCCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACGTTATCCGACTACAA 22366
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| | || || || ||||| || ||| | | |||||
Sbjct 22365 CATCCAGAAGGAGTCCACTCTCCACTTGGTTCTCCGTCTTCGTGGCGG 22318
>seq1762
Length=12899
Score = 89.7 bits (98), Expect = 5e-13
Identities = 116/160 (73%), Gaps = 3/160 (2%)
Strand=Plus/Plus
Query 69071 ACCACGCCGTGCTGCTGGTCGGCTACGGCGTCGAAAACGGCGTGCCCTACTGGGCGTTCA 69130
|||||||||| || || ||||||| ||||| ||| |||||| |||| |||| |||
Sbjct 435 ACCACGCCGTCCTCCTCGTCGGCTTCGGCGCCGAGGCCGGCGTCCCCTTCTGGATCGTCA 494
Query 69131 AAAACACGTGGGGTGACGACTGGGGCGAAAACGGCTATTTCCGCGTCCGCCAAAACATCA 69190
| |||| ||||| | |||||||||||| |||||| |||||| || || | ||
Sbjct 495 AGAACAGCTGGGGCGCCGACTGGGGCGAGGCCGGCTACTTCCGCATCTTCCGCGGCGGCA 554
Query 69191 ACGCGTGCGGCATGGTCAACGACCTGGCCTCCACCGCCGT 69230
|| | |||||||| | | || || ||| || ||||||
Sbjct 555 ACACTTGCGGCATCGCCGACAAC---GCCGTCAGCGCCGT 591
>seq7156
Length=22399
Score = 86.0 bits (94), Expect = 6e-12
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || ||||| |||||||| |||| ||||||||| |
Sbjct 9727 ATGCAGATTTTCGTCAAGACCTTGACTGGCAAGACCATCACTCTCGAGGTCGAGGCCTCT 9786
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | ||| | |||| || |||| || || |||||||||||| | |||||
Sbjct 9787 GACACCATCGAAAATGTCAAAGCCAAGATCCAAGATAAGGAGGGAATTCCCCCAGACCAG 9846
Query 38364 CAGCGGCTCATTTACGCGGG 38383
||||| || || | ||| ||
Sbjct 9847 CAGCGCCTGATCTTCGCCGG 9866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500125846278400
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