Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_014036.1
Length=174436
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 140 4e-28
>seq2257
Length=8409
Score = 140 bits (154), Expect = 4e-28
Identities = 203/287 (71%), Gaps = 0/287 (0%)
Strand=Plus/Plus
Query 41220 TCACAACGTGCTGGTATTGGGGTTAACGCGGGACATATTCGCGCAATGGGTTCTAAAATC 41279
||||| ||||| ||||| || | || | || | |||||||| | || ||||
Sbjct 5608 TCACAGCGTGCCGGTATCGGTATCAATGGTGGCCGCATTCGCGCCGTAGGCAGCGAAATT 5667
Query 41280 CGTGGTGGTGAAGCTGTTCATACTGGTGTGATTCCTTTCTGGAAACATATCCAAACCGCT 41339
|||||||||||||| || || ||| | || |||| || |||| | ||
Sbjct 5668 CGTGGTGGTGAAGCACAACACACGGGTTGCCTGCCGTTCTTCAAGATGTTCCAGGCTGCG 5727
Query 41340 GTTAAATCCTGTTCACAGGGTGGCGTTCGTGGTGGTGCTGCAACACTGTATTATCCTTTC 41399
|| || ||||| || || || ||||| ||||||||||| ||||| ||| || || |
Sbjct 5728 GTGAAGTCCTGCTCGCAAGGCGGCGTGCGTGGTGGTGCGGCAACCTTGTTCTACCCCATG 5787
Query 41400 TGGCATCTGGAAGTTGAAAACCTTCTGGTGTTGAAGAACAACAAAGGCGTAGAAGAAAAC 41459
||||| |||||||| |||| || ||||| ||||||||||| || || |||||||||
Sbjct 5788 TGGCACCTGGAAGTGGAAACACTGCTGGTTCTGAAGAACAACCGTGGTGTGGAAGAAAAC 5847
Query 41460 CGCGTTCGTCATCTTGATTACGGTGTACAGCTTAACCAGTTGATGTA 41506
|| ||||||| | || |||||||| ||| | |||| ||| ||||
Sbjct 5848 CGTATTCGTCACTTGGACTACGGTGTTCAGATCAACCGCTTGCTGTA 5894
Score = 89.7 bits (98), Expect = 6e-13
Identities = 164/237 (69%), Gaps = 4/237 (2%)
Strand=Plus/Plus
Query 42874 TTTTCGAAAGCCTGACGCAAAAACAACTTTCTTTCTTCTGGCGTCCGGAAGAAGTCGATC 42933
|||| |||| |||| |||| || | || ||||||||||||||||| ||||| ||
Sbjct 7265 TTTTTGAAAAGCTGATTGAAAAGCAGTTGTCCTTCTTCTGGCGTCCGGAGGAAGTGGACA 7324
Query 42934 TGTCTACTGACCGTATGCAGTATGCAAAACTTCCTGAACATGAAAAAATCATTTTCGATT 42993
| | ||||| || | ||| || || ||||| || ||||| |||||||
Sbjct 7325 TTACCCAGGACCGGATCGACTATCAGAACCTGCCTGACCACGAAAAGCACATTTTCATCA 7384
Query 42994 CTAACCTACAGTATCAAACCCTGTTAGATACCATTCAGGGACGTGGGCCTAACCTCGCAT 43053
|| || ||||||| ||| || | ||| |||| ||||| || | || ||| | || |
Sbjct 7385 GCAATCTGAAGTATCAGACCTTGCTGGATTCCATCCAGGGCCGCAGCCCCAACGTGGCCT 7444
Query 43054 TTTTGCCAATTGCATCCGAT--GTGAGCATGGAAACCTGGATCGAAACGTGGGCGTT 43108
| |||| | | || |||| |||| ||||||||||||| ||||| ||||| ||
Sbjct 7445 TCCTGCCTTTGGTAT-CGATTCCGGAGC-TGGAAACCTGGATTGAAACCTGGGCTTT 7499
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 558014811441600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |