Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_014036.1 Length=174436 Score E Sequences producing significant alignments: (Bits) Value seq2257 140 4e-28 >seq2257 Length=8409 Score = 140 bits (154), Expect = 4e-28 Identities = 203/287 (71%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 41220 TCACAACGTGCTGGTATTGGGGTTAACGCGGGACATATTCGCGCAATGGGTTCTAAAATC 41279 ||||| ||||| ||||| || | || | || | |||||||| | || |||| Sbjct 5608 TCACAGCGTGCCGGTATCGGTATCAATGGTGGCCGCATTCGCGCCGTAGGCAGCGAAATT 5667 Query 41280 CGTGGTGGTGAAGCTGTTCATACTGGTGTGATTCCTTTCTGGAAACATATCCAAACCGCT 41339 |||||||||||||| || || ||| | || |||| || |||| | || Sbjct 5668 CGTGGTGGTGAAGCACAACACACGGGTTGCCTGCCGTTCTTCAAGATGTTCCAGGCTGCG 5727 Query 41340 GTTAAATCCTGTTCACAGGGTGGCGTTCGTGGTGGTGCTGCAACACTGTATTATCCTTTC 41399 || || ||||| || || || ||||| ||||||||||| ||||| ||| || || | Sbjct 5728 GTGAAGTCCTGCTCGCAAGGCGGCGTGCGTGGTGGTGCGGCAACCTTGTTCTACCCCATG 5787 Query 41400 TGGCATCTGGAAGTTGAAAACCTTCTGGTGTTGAAGAACAACAAAGGCGTAGAAGAAAAC 41459 ||||| |||||||| |||| || ||||| ||||||||||| || || ||||||||| Sbjct 5788 TGGCACCTGGAAGTGGAAACACTGCTGGTTCTGAAGAACAACCGTGGTGTGGAAGAAAAC 5847 Query 41460 CGCGTTCGTCATCTTGATTACGGTGTACAGCTTAACCAGTTGATGTA 41506 || ||||||| | || |||||||| ||| | |||| ||| |||| Sbjct 5848 CGTATTCGTCACTTGGACTACGGTGTTCAGATCAACCGCTTGCTGTA 5894 Score = 89.7 bits (98), Expect = 6e-13 Identities = 164/237 (69%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 42874 TTTTCGAAAGCCTGACGCAAAAACAACTTTCTTTCTTCTGGCGTCCGGAAGAAGTCGATC 42933 |||| |||| |||| |||| || | || ||||||||||||||||| ||||| || Sbjct 7265 TTTTTGAAAAGCTGATTGAAAAGCAGTTGTCCTTCTTCTGGCGTCCGGAGGAAGTGGACA 7324 Query 42934 TGTCTACTGACCGTATGCAGTATGCAAAACTTCCTGAACATGAAAAAATCATTTTCGATT 42993 | | ||||| || | ||| || || ||||| || ||||| ||||||| Sbjct 7325 TTACCCAGGACCGGATCGACTATCAGAACCTGCCTGACCACGAAAAGCACATTTTCATCA 7384 Query 42994 CTAACCTACAGTATCAAACCCTGTTAGATACCATTCAGGGACGTGGGCCTAACCTCGCAT 43053 || || ||||||| ||| || | ||| |||| ||||| || | || ||| | || | Sbjct 7385 GCAATCTGAAGTATCAGACCTTGCTGGATTCCATCCAGGGCCGCAGCCCCAACGTGGCCT 7444 Query 43054 TTTTGCCAATTGCATCCGAT--GTGAGCATGGAAACCTGGATCGAAACGTGGGCGTT 43108 | |||| | | || |||| |||| ||||||||||||| ||||| ||||| || Sbjct 7445 TCCTGCCTTTGGTAT-CGATTCCGGAGC-TGGAAACCTGGATTGAAACCTGGGCTTT 7499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 558014811441600