Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_014467.1 Length=176788 Score E Sequences producing significant alignments: (Bits) Value seq2257 199 4e-46 >seq2257 Length=8409 Score = 199 bits (220), Expect = 4e-46 Identities = 305/433 (70%), Gaps = 4/433 (1%) Strand=Plus/Plus Query 41140 TCATTACCTACGCCTATTATGGCGGGTGTGCGTACTCCTACGCGTCAGTTCTCCAGTTGT 41199 || || || ||||| || ||||| || ||||| || || || || |||||| | ||| Sbjct 5479 TCCTTGCCCACGCCCATCATGGCTGGCGTGCGCACACCCACTCGCCAGTTCAGCTCTTGC 5538 Query 41200 GTTGTAATCGAATCTGGTGATTCTCTGGGTTCTCTGAACGCTGTTACGTCCGCGATCGTG 41259 || | ||||||| || || |||| | || || || ||| || || Sbjct 5539 GTGCTGATCGAATGTGACGACAGCCTGGACAGCATCAATGCCACGACCAGCGCCATTGTT 5598 Query 41260 AAATATATCTCTCAACGTGCGGGTATCGGTGTCAACGCCGGACACATTCGCGCTATGGGT 41319 || | || || ||||| ||||||||| |||| | || | ||||||||| | || Sbjct 5599 CGTTACGTGTCACAGCGTGCCGGTATCGGTATCAATGGTGGCCGCATTCGCGCCGTAGGC 5658 Query 41320 TCAAAAATCCGTGGTGGTGAAGCAGTCCATACAGGCGTTATC--CCGTTCTGGAAACACA 41377 |||| ||||||||||||||| | | ||| | ||| | ||||||| || Sbjct 5659 AGCGAAATTCGTGGTGGTGAAGCA--CAACACACGGGTTGCCTGCCGTTCTTCAAGATGT 5716 Query 41378 TTCAGACGGCGGTTAAATCTTGTTCCCAGGGTGGCGTTCGTGGTGGTGCAGCAACCCTGT 41437 | ||| | ||||| || || || || || || ||||| ||||||||||| |||||| ||| Sbjct 5717 TCCAGGCTGCGGTGAAGTCCTGCTCGCAAGGCGGCGTGCGTGGTGGTGCGGCAACCTTGT 5776 Query 41438 ATTATCCGATCTGGCATCTTGAAGTTGAAAACCTGCTGGTTCTGAAAAATAACCGTGGCG 41497 || || || ||||| || ||||| |||| |||||||||||||| || |||||||| | Sbjct 5777 TCTACCCCATGTGGCACCTGGAAGTGGAAACACTGCTGGTTCTGAAGAACAACCGTGGTG 5836 Query 41498 TTGAAGAAAACCGTATTCGTCACCTGGACTATGGCGTACAGCTTAACGATTTGATGTATA 41557 | ||||||||||||||||||||| ||||||| || || ||| | ||| ||| |||| Sbjct 5837 TGGAAGAAAACCGTATTCGTCACTTGGACTACGGTGTTCAGATCAACCGCTTGCTGTACC 5896 Query 41558 AGCGTTTAATCAA 41570 |||| | ||||| Sbjct 5897 AGCGCCTGATCAA 5909 Score = 93.3 bits (102), Expect = 5e-14 Identities = 120/164 (73%), Gaps = 4/164 (2%) Strand=Plus/Plus Query 43912 CTGTACCTGTGTATGCACGCTGTCAACGCTCTGGAAGCGATCCGCTTCTACGTGTCGTTT 43971 ||||||||||| ||| ||||| ||| || || |||||||| ||||| ||| Sbjct 7738 CTGTACCTGTGCATGATGAGCGTCAATATTCTTGAGGCCATCCGCTTTTACGTCAGCTTT 7797 Query 43972 ACCTTCACGTTCAACTTTGCCGA--ACAAGGTAAGATGGAAGGTAACGCGAAGATCATGC 44029 ||| | | ||| ||||||||| |||| | ||||||||| || || |||||||| | Sbjct 7798 GCCTGCTCCTTCGCCTTTGCCGAGCGCAAGCT--GATGGAAGGCAATGCCAAGATCATTC 7855 Query 44030 GTCTGATTGCCCGTGATGAAGCACTTCATCAGAAAGGTACTCAA 44073 | ||||||| ||||||||||| || |||| || || || ||| Sbjct 7856 GCTTGATTGCGCGTGATGAAGCGCTGCATCTGACTGGCACGCAA 7899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565540504900800