Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_014595.1 Length=170605 Score E Sequences producing significant alignments: (Bits) Value seq2257 134 2e-26 >seq2257 Length=8409 Score = 134 bits (148), Expect = 2e-26 Identities = 298/438 (68%), Gaps = 12/438 (3%) Strand=Plus/Minus Query 142939 CTGGACACCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCCCTTGTTGTTCTTCAG 142998 ||| ||||| ||||||| || | || ||||||||||| || || |||||||||||| Sbjct 5877 CTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTCTTCAG 5818 Query 142999 AACGAGTAAATTTTCAACTTCCAAATGCCAAATAGG--ATAATAAGCAGTAGCAGCGCCG 143056 ||| || | |||| ||||||| ||||| || || | || ||| || || || || Sbjct 5817 AACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAG--GTTGCCGCACCA 5760 Query 143057 CCACGGATTCCACCTTGTGAACATGATTTAACAGCCGTTTGGAAATGTTTCCAGAACGGA 143116 ||||| | || ||||| || || || || || || | ||||| || ||||||| Sbjct 5759 CCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAACGGC 5700 Query 143117 ATAACACCAGTATGCTTAACTTCGCCCATACCGATTTTCG-AACCTTCGGCACGAATCAT 143175 | ||| || || | |||| ||| ||| ||||| ||| |||| ||||| Sbjct 5699 AGGCAACCCGTGTGTTGTGCTTC-ACCACCACGAATTTCGCTGCCTACGGCGCGAATGCG 5641 Query 143176 GCCAACGTTGATACCGATACCTGCACGCTTACTGATA--TATTCGATGATTGAATTAGCA 143233 |||| | |||||||||||||| ||||||| ||| | || | || | | | Sbjct 5640 GCCACCATTGATACCGATACCGGCACGCT--GTGACACGTAACGAACAATGGCGCTGGTC 5583 Query 143234 GTCTTATTAATTGACTTCAGGGAGTCAGCCGCTTCGATAACCACGCAGGAACTGAACTGT 143293 || ||| || | |||| ||| | |||||| | |||||| || |||||||| Sbjct 5582 GTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAACTGG 5523 Query 143294 CTGGTAGGTGTTCTGGCGCCGGCCATGATAGGCGTGGGCAACGAAACCTGTCGAGTG-GA 143352 | || ||||| | |||| |||||||| ||||||||||| |||| || | | || || Sbjct 5522 CGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAATCT-TGAATTGCGA 5464 Query 143353 TACTGCATCATAAAAACG 143370 ||| || || ||||| || Sbjct 5463 TACGGCGTCGTAAAAGCG 5446 Score = 86.0 bits (94), Expect = 7e-12 Identities = 183/267 (69%), Gaps = 6/267 (2%) Strand=Plus/Minus Query 141257 ATTTCGCATGATGTGCGTATAAGAACGAGAGTGAATTGTCTCGCTGAATGTCCAGGTCTG 141316 ||| || ||||||||||| || || || |||||||| |||||| ||| | |||||| | Sbjct 7545 ATTGCGAATGATGTGCGTGTACGAGCGCGAGTGAATCGTCTCGGAGAAAGCCCAGGTTTC 7486 Query 141317 AATCCATGTATCAAGACTCGGG--TCAGAAACTAATGCGGCTAATGCTGCAGCTGGAGC- 141373 |||||| || || || ||| || || || || || | || || | | ||| || Sbjct 7485 AATCCAGGTTTCCAG-CTCCGGAATC-GATACCAAAGGCAGGAAGGCCAC-GTTGGGGCT 7429 Query 141374 ACGACCCTGAATACTATCCAGAAGTGATTGGTATTTCAGGTTGTTGGTAAAAATATTTTG 141433 || ||||| || |||||| | | || || ||||| ||| || | ||||| | | Sbjct 7428 GCGGCCCTGGATGGAATCCAGCAAGGTCTGATACTTCAGATTGCTGATGAAAATGTGCTT 7369 Query 141434 TTGATGTTCAGGAAGCTTATTAAATTGGGCTCCATCCATCATCAGGTTTACTTCCTCTGG 141493 || || ||||| || || | | | | | | ||| | | || |||||||| || Sbjct 7368 TTCGTGGTCAGGCAGGTTCTGATAGTCGATCCGGTCCTGGGTAATGTCCACTTCCTCCGG 7309 Query 141494 ACGCCAGAAGAATGATAATTGCTTTTC 141520 |||||||||||| || || |||||||| Sbjct 7308 ACGCCAGAAGAAGGACAACTGCTTTTC 7282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545756762274000