Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_014595.1
Length=170605
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 134 2e-26
>seq2257
Length=8409
Score = 134 bits (148), Expect = 2e-26
Identities = 298/438 (68%), Gaps = 12/438 (3%)
Strand=Plus/Minus
Query 142939 CTGGACACCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCCCTTGTTGTTCTTCAG 142998
||| ||||| ||||||| || | || ||||||||||| || || ||||||||||||
Sbjct 5877 CTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTCTTCAG 5818
Query 142999 AACGAGTAAATTTTCAACTTCCAAATGCCAAATAGG--ATAATAAGCAGTAGCAGCGCCG 143056
||| || | |||| ||||||| ||||| || || | || ||| || || || ||
Sbjct 5817 AACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAG--GTTGCCGCACCA 5760
Query 143057 CCACGGATTCCACCTTGTGAACATGATTTAACAGCCGTTTGGAAATGTTTCCAGAACGGA 143116
||||| | || ||||| || || || || || || | ||||| || |||||||
Sbjct 5759 CCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAACGGC 5700
Query 143117 ATAACACCAGTATGCTTAACTTCGCCCATACCGATTTTCG-AACCTTCGGCACGAATCAT 143175
| ||| || || | |||| ||| ||| ||||| ||| |||| |||||
Sbjct 5699 AGGCAACCCGTGTGTTGTGCTTC-ACCACCACGAATTTCGCTGCCTACGGCGCGAATGCG 5641
Query 143176 GCCAACGTTGATACCGATACCTGCACGCTTACTGATA--TATTCGATGATTGAATTAGCA 143233
|||| | |||||||||||||| ||||||| ||| | || | || | | |
Sbjct 5640 GCCACCATTGATACCGATACCGGCACGCT--GTGACACGTAACGAACAATGGCGCTGGTC 5583
Query 143234 GTCTTATTAATTGACTTCAGGGAGTCAGCCGCTTCGATAACCACGCAGGAACTGAACTGT 143293
|| ||| || | |||| ||| | |||||| | |||||| || ||||||||
Sbjct 5582 GTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAACTGG 5523
Query 143294 CTGGTAGGTGTTCTGGCGCCGGCCATGATAGGCGTGGGCAACGAAACCTGTCGAGTG-GA 143352
| || ||||| | |||| |||||||| ||||||||||| |||| || | | || ||
Sbjct 5522 CGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAATCT-TGAATTGCGA 5464
Query 143353 TACTGCATCATAAAAACG 143370
||| || || ||||| ||
Sbjct 5463 TACGGCGTCGTAAAAGCG 5446
Score = 86.0 bits (94), Expect = 7e-12
Identities = 183/267 (69%), Gaps = 6/267 (2%)
Strand=Plus/Minus
Query 141257 ATTTCGCATGATGTGCGTATAAGAACGAGAGTGAATTGTCTCGCTGAATGTCCAGGTCTG 141316
||| || ||||||||||| || || || |||||||| |||||| ||| | |||||| |
Sbjct 7545 ATTGCGAATGATGTGCGTGTACGAGCGCGAGTGAATCGTCTCGGAGAAAGCCCAGGTTTC 7486
Query 141317 AATCCATGTATCAAGACTCGGG--TCAGAAACTAATGCGGCTAATGCTGCAGCTGGAGC- 141373
|||||| || || || ||| || || || || || | || || | | ||| ||
Sbjct 7485 AATCCAGGTTTCCAG-CTCCGGAATC-GATACCAAAGGCAGGAAGGCCAC-GTTGGGGCT 7429
Query 141374 ACGACCCTGAATACTATCCAGAAGTGATTGGTATTTCAGGTTGTTGGTAAAAATATTTTG 141433
|| ||||| || |||||| | | || || ||||| ||| || | ||||| | |
Sbjct 7428 GCGGCCCTGGATGGAATCCAGCAAGGTCTGATACTTCAGATTGCTGATGAAAATGTGCTT 7369
Query 141434 TTGATGTTCAGGAAGCTTATTAAATTGGGCTCCATCCATCATCAGGTTTACTTCCTCTGG 141493
|| || ||||| || || | | | | | | ||| | | || |||||||| ||
Sbjct 7368 TTCGTGGTCAGGCAGGTTCTGATAGTCGATCCGGTCCTGGGTAATGTCCACTTCCTCCGG 7309
Query 141494 ACGCCAGAAGAATGATAATTGCTTTTC 141520
|||||||||||| || || ||||||||
Sbjct 7308 ACGCCAGAAGAAGGACAACTGCTTTTC 7282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 545756762274000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |