Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_014636.1 Length=225268 Score E Sequences producing significant alignments: (Bits) Value seq2257 168 1e-36 >seq2257 Length=8409 Score = 168 bits (186), Expect = 1e-36 Identities = 282/403 (70%), Gaps = 6/403 (1%) Strand=Plus/Minus Query 129067 TTGATTTGGATACCGTAGTCAAGATGTCGGATTCGGTTTTCTTCAACGCCCTTGTTATTC 129126 ||||| || | ||||||||| | || || || ||||||||||| || || ||| ||| Sbjct 5882 TTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTC 5823 Query 129127 TTGAGCACAAGGATTTTTTCAACTTCGAGGTGCCACATTGGGTAATATAGAGTTGCGGCA 129186 || || || || | | |||| ||||| ||||||||||| ||||| | | ||||| ||| Sbjct 5822 TTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAGGTTGCCGCA 5763 Query 129187 CCGCCGCGAACACCACCCTGTGAACAGCTCTTTACCGCAGTCTGGAAGTATTTCCAAAAT 129246 || || || || || || || || ||| ||| ||||||| |||||| || | || Sbjct 5762 CCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAAC 5703 Query 129247 GGGATAATACCGGTATGTCGCACTTCACCGCTACGAATGCGAGATCCCT-CGGCACGAAT 129305 || | ||| || ||| | ||||||| | |||||| | | ||| |||| ||||| Sbjct 5702 GGCAGGCAACCCGTGTGTTGTGCTTCACCACCACGAAT-TTCGCTGCCTACGGCGCGAAT 5644 Query 129306 CGCACCGCCGTTGATGCCGATACCAGCGCGTTTGCTGATA--TAGTCAACGATAGAACTA 129363 || || ||||| |||||||| || || | ||| | || ||| || | || Sbjct 5643 GCGGCCACCATTGATACCGATACCGGCACGCT--GTGACACGTAACGAACAATGGCGCTG 5586 Query 129364 GCGGTAGCGTTGATGCTATCCAGTTCGTCTCCACATTCGATCTTGACACAAGAGCTAAAC 129423 | || || |||||||| ||||| ||| ||||||||||| || |||||||| ||| Sbjct 5585 GTCGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAAC 5526 Query 129424 TGCCGAGTCGGGGTGCGAACACCTGCGAGAATCGGAGTTGGCA 129466 || ||||| || ||||| || || || | || || || |||| Sbjct 5525 TGGCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCA 5483 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 127056 TGGGTGCCTTTGAGGTGCAATTGTTCATCACGCGCAATCAGTTTCATGATCTTAGCGTTG 127115 || ||||| | || |||| ||||||||||||||||| |||||||| || ||| Sbjct 7898 TGCGTGCCAGTCAGATGCAGCGCTTCATCACGCGCAATCAAGCGAATGATCTTGGCATTG 7839 Query 127116 CCTTCCATCAAACCGCGTTCGGCAAACGAGAAGGTGCAGGCGAAGCTTACATAAAAACGA 127175 |||||||||| ||| |||||||| | ||||| |||||| ||||| || ||||| || Sbjct 7838 CCTTCCATCAGCTTGCGCTCGGCAAAGGCGAAGGAGCAGGCAAAGCTGACGTAAAAGCGG 7779 Query 127176 ATCGCTTC 127183 || || || Sbjct 7778 ATGGCCTC 7771 Score = 86.0 bits (94), Expect = 9e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 128120 TTTCTACCTCTGGCACTAGCTGATTAAACACACCATCTTTCGATTGCTTGGTGCTCACTA 128179 |||| | || ||||| | |||| || | ||| || || || |||||| | || | Sbjct 6844 TTTCAAATTCAGGCACCACCTGACGCAAGATACCGTCCTTGGACTGCTTGACGGATACCA 6785 Query 128180 GGCCACGCGGTGGCTCGATACCGTTTGTGCTGTTGGTAATTTGGCTAGAACTTTCACACG 128239 | |||||||| ||||| ||||| || ||| |||| ||| ||||| || |||| | | Sbjct 6784 GACCACGCGGAGGCTCAATACCATTGGTGGCATTGGCAATCTGGCTGGAGGTTTCCGAAG 6725 Query 128240 GCATAAACGCGCTCAGTGTGTCATTGCGCATACCGTACTTTTTAATCTCGCCACGTAGCC 128299 |||| || ||| |||| || ||||||| ||||| ||| || || |||| || Sbjct 6724 GCATCAAGGCGGTCAGGGTCGAGTTGCGCAGACCGTGCTTGACGATATCAGCACGCAGGG 6665 Query 128300 ATTCCCAATCCA 128311 ||||||||||| Sbjct 6664 CTTCCCAATCCA 6653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 720661941508800