Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_014636.1
Length=225268
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 168 1e-36
>seq2257
Length=8409
Score = 168 bits (186), Expect = 1e-36
Identities = 282/403 (70%), Gaps = 6/403 (1%)
Strand=Plus/Minus
Query 129067 TTGATTTGGATACCGTAGTCAAGATGTCGGATTCGGTTTTCTTCAACGCCCTTGTTATTC 129126
||||| || | ||||||||| | || || || ||||||||||| || || ||| |||
Sbjct 5882 TTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTC 5823
Query 129127 TTGAGCACAAGGATTTTTTCAACTTCGAGGTGCCACATTGGGTAATATAGAGTTGCGGCA 129186
|| || || || | | |||| ||||| ||||||||||| ||||| | | ||||| |||
Sbjct 5822 TTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAGGTTGCCGCA 5763
Query 129187 CCGCCGCGAACACCACCCTGTGAACAGCTCTTTACCGCAGTCTGGAAGTATTTCCAAAAT 129246
|| || || || || || || || ||| ||| ||||||| |||||| || | ||
Sbjct 5762 CCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAAC 5703
Query 129247 GGGATAATACCGGTATGTCGCACTTCACCGCTACGAATGCGAGATCCCT-CGGCACGAAT 129305
|| | ||| || ||| | ||||||| | |||||| | | ||| |||| |||||
Sbjct 5702 GGCAGGCAACCCGTGTGTTGTGCTTCACCACCACGAAT-TTCGCTGCCTACGGCGCGAAT 5644
Query 129306 CGCACCGCCGTTGATGCCGATACCAGCGCGTTTGCTGATA--TAGTCAACGATAGAACTA 129363
|| || ||||| |||||||| || || | ||| | || ||| || | ||
Sbjct 5643 GCGGCCACCATTGATACCGATACCGGCACGCT--GTGACACGTAACGAACAATGGCGCTG 5586
Query 129364 GCGGTAGCGTTGATGCTATCCAGTTCGTCTCCACATTCGATCTTGACACAAGAGCTAAAC 129423
| || || |||||||| ||||| ||| ||||||||||| || |||||||| |||
Sbjct 5585 GTCGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAAC 5526
Query 129424 TGCCGAGTCGGGGTGCGAACACCTGCGAGAATCGGAGTTGGCA 129466
|| ||||| || ||||| || || || | || || || ||||
Sbjct 5525 TGGCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCA 5483
Score = 91.5 bits (100), Expect = 2e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 127056 TGGGTGCCTTTGAGGTGCAATTGTTCATCACGCGCAATCAGTTTCATGATCTTAGCGTTG 127115
|| ||||| | || |||| ||||||||||||||||| |||||||| || |||
Sbjct 7898 TGCGTGCCAGTCAGATGCAGCGCTTCATCACGCGCAATCAAGCGAATGATCTTGGCATTG 7839
Query 127116 CCTTCCATCAAACCGCGTTCGGCAAACGAGAAGGTGCAGGCGAAGCTTACATAAAAACGA 127175
|||||||||| ||| |||||||| | ||||| |||||| ||||| || ||||| ||
Sbjct 7838 CCTTCCATCAGCTTGCGCTCGGCAAAGGCGAAGGAGCAGGCAAAGCTGACGTAAAAGCGG 7779
Query 127176 ATCGCTTC 127183
|| || ||
Sbjct 7778 ATGGCCTC 7771
Score = 86.0 bits (94), Expect = 9e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 128120 TTTCTACCTCTGGCACTAGCTGATTAAACACACCATCTTTCGATTGCTTGGTGCTCACTA 128179
|||| | || ||||| | |||| || | ||| || || || |||||| | || |
Sbjct 6844 TTTCAAATTCAGGCACCACCTGACGCAAGATACCGTCCTTGGACTGCTTGACGGATACCA 6785
Query 128180 GGCCACGCGGTGGCTCGATACCGTTTGTGCTGTTGGTAATTTGGCTAGAACTTTCACACG 128239
| |||||||| ||||| ||||| || ||| |||| ||| ||||| || |||| | |
Sbjct 6784 GACCACGCGGAGGCTCAATACCATTGGTGGCATTGGCAATCTGGCTGGAGGTTTCCGAAG 6725
Query 128240 GCATAAACGCGCTCAGTGTGTCATTGCGCATACCGTACTTTTTAATCTCGCCACGTAGCC 128299
|||| || ||| |||| || ||||||| ||||| ||| || || |||| ||
Sbjct 6724 GCATCAAGGCGGTCAGGGTCGAGTTGCGCAGACCGTGCTTGACGATATCAGCACGCAGGG 6665
Query 128300 ATTCCCAATCCA 128311
|||||||||||
Sbjct 6664 CTTCCCAATCCA 6653
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 720661941508800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |