Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq4834 91.5 6e-13 seq5063 89.7 2e-12 seq2066 84.2 9e-11 seq71 84.2 9e-11 >seq4834 Length=88581 Score = 91.5 bits (100), Expect = 6e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 391137 ATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAA 391196 ||||||||||||||||| || |||||||| || || || | |||||| | || || || Sbjct 21844 ATTCAAGATAAGGAAGGCATCCCTCCTGACCAGCAGCGCCTCATTTTCGCCGGAAAGCAG 21785 Query 391197 CTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTA 391256 ||||||||||| ||||||||| | || || || || | ||||| | || || || || Sbjct 21784 CTTGAAGATGGCAGAACTTTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCATTTG 21725 Query 391257 GTA 391259 ||| Sbjct 21724 GTA 21722 >seq5063 Length=4177 Score = 89.7 bits (98), Expect = 2e-12 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || ||||| || || || || || || || || ||| | || Sbjct 2813 ATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACGATCACCCTCGAAGTCGAAGCCTCC 2754 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | || || || || || |||||||||||||| || |||||| Sbjct 2753 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGATCAA 2694 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||||| || ||| | || || ||||| || ||||| | || || |||| || || Sbjct 2693 CAGCGTTTGATCTTCGCCGGAAAGCAACTCGAGGATGGCCGCACCCTGTCGGACTACAAC 2634 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | ||||| | || |||||| Sbjct 2633 ATCCAGAAGGAATCGACTCTTCAC 2610 >seq2066 Length=2850 Score = 84.2 bits (92), Expect = 9e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||| || || || || || || || || ||| | || Sbjct 2154 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACGATCACCCTCGAAGTCGAAGCCTCG 2095 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | || || || || || |||||||||||||| || |||||| Sbjct 2094 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGATCAA 2035 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||||| || ||| | || || ||||| || ||||| | || || |||| || || Sbjct 2034 CAGCGTTTGATCTTCGCCGGAAAGCAACTCGAGGATGGCCGCACCCTGTCGGACTACAAC 1975 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || || ||||| || Sbjct 1974 ATCCAGAAGGAGTCCACCCTCCACTTGGT 1946 >seq71 Length=89762 Score = 84.2 bits (92), Expect = 9e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 || |||||| | || | ||||||||| || ||||| |||| || ||| ||| | Sbjct 9700 CCCGAAGAAGTGTCTGCCATGGTTCTTGGAAAGATGAAGGAAATCGCTGAATCGTATCTC 9759 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 || ||| | | || || | ||||| || ||||| ||||| ||||| || || Sbjct 9760 GGAAAGGAAGTCAAGCACGCCGTTGTCACTGTGCCTGCTTACTTCAACGATGCCCAGCGT 9819 Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 || || || || ||||| || ||||||||||| || ||| |||| || || || ||| Sbjct 9820 CAGGCCACCAAGGATGCCGGTGTCATTGCTGGTTTGAACGTTGTTCGTATCATCAACGAA 9879 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACT 451452 ||||| || || ||| | || || || || Sbjct 9880 CCTACCGCTGCCGCTATTGCCTACGGCCT 9908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975528292671080