Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq4834 91.5 6e-13
seq5063 89.7 2e-12
seq2066 84.2 9e-11
seq71 84.2 9e-11
>seq4834
Length=88581
Score = 91.5 bits (100), Expect = 6e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 391137 ATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAA 391196
||||||||||||||||| || |||||||| || || || | |||||| | || || ||
Sbjct 21844 ATTCAAGATAAGGAAGGCATCCCTCCTGACCAGCAGCGCCTCATTTTCGCCGGAAAGCAG 21785
Query 391197 CTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTA 391256
||||||||||| ||||||||| | || || || || | ||||| | || || || ||
Sbjct 21784 CTTGAAGATGGCAGAACTTTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCATTTG 21725
Query 391257 GTA 391259
|||
Sbjct 21724 GTA 21722
>seq5063
Length=4177
Score = 89.7 bits (98), Expect = 2e-12
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || ||||| || || || || || || || || ||| | ||
Sbjct 2813 ATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACGATCACCCTCGAAGTCGAAGCCTCC 2754
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | ||| || | || || || || || |||||||||||||| || ||||||
Sbjct 2753 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGATCAA 2694
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||||| || ||| | || || ||||| || ||||| | || || |||| || ||
Sbjct 2693 CAGCGTTTGATCTTCGCCGGAAAGCAACTCGAGGATGGCCGCACCCTGTCGGACTACAAC 2634
Query 391230 ATTGATAAGGATGCAACACTTCAC 391253
|| | ||||| | || ||||||
Sbjct 2633 ATCCAGAAGGAATCGACTCTTCAC 2610
>seq2066
Length=2850
Score = 84.2 bits (92), Expect = 9e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || |||| || || || || || || || || ||| | ||
Sbjct 2154 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACGATCACCCTCGAAGTCGAAGCCTCG 2095
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | ||| || | || || || || || |||||||||||||| || ||||||
Sbjct 2094 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGATCAA 2035
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||||| || ||| | || || ||||| || ||||| | || || |||| || ||
Sbjct 2034 CAGCGTTTGATCTTCGCCGGAAAGCAACTCGAGGATGGCCGCACCCTGTCGGACTACAAC 1975
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258
|| | ||||| | || || ||||| ||
Sbjct 1974 ATCCAGAAGGAGTCCACCCTCCACTTGGT 1946
>seq71
Length=89762
Score = 84.2 bits (92), Expect = 9e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303
|| |||||| | || | ||||||||| || ||||| |||| || ||| ||| |
Sbjct 9700 CCCGAAGAAGTGTCTGCCATGGTTCTTGGAAAGATGAAGGAAATCGCTGAATCGTATCTC 9759
Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363
|| ||| | | || || | ||||| || ||||| ||||| ||||| || ||
Sbjct 9760 GGAAAGGAAGTCAAGCACGCCGTTGTCACTGTGCCTGCTTACTTCAACGATGCCCAGCGT 9819
Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423
|| || || || ||||| || ||||||||||| || ||| |||| || || || |||
Sbjct 9820 CAGGCCACCAAGGATGCCGGTGTCATTGCTGGTTTGAACGTTGTTCGTATCATCAACGAA 9879
Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACT 451452
||||| || || ||| | || || || ||
Sbjct 9880 CCTACCGCTGCCGCTATTGCCTACGGCCT 9908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975528292671080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |