Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_014661.1
Length=164093
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 178 1e-39
>seq2257
Length=8409
Score = 178 bits (196), Expect = 1e-39
Identities = 302/436 (69%), Gaps = 4/436 (1%)
Strand=Plus/Minus
Query 141456 TTGATTTGAAGGCCATAATCCATGTGACGAATACGGTTTTCTTCAACACCTTTGTTGTTC 141515
||||| |||| || || |||| ||||||||||||||||||||| ||||| |||||||
Sbjct 5882 TTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTC 5823
Query 141516 TTCAACACAATCAAGTTTTCCACTTCAAGGTGCCACATAGGGAAGAACATTGTTGCCGAA 141575
|||| || | || |||||||||| ||||||||||| ||| |||||| ||||||| |
Sbjct 5822 TTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAGGTTGCCGCA 5763
Query 141576 CCTTTACGAATACCACCTTGAGAACAGCAATGAACCGCTGAGTTAAAGTGCTTCCAGAAA 141635
|| ||| | || ||||| || ||| | | ||||| | | || ||| ||||
Sbjct 5762 CCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAAC 5703
Query 141636 GGTACTACGCCAGTGTGTTTGACTTCGCCTGGGCCAATTTTCGAACCTTCAGCTCGAATC 141695
|| | || ||||||| |||| || | ||||| ||| | || |||||
Sbjct 5702 GGCAGGCAACCCGTGTGTTGTGCTTCACCACCACGAATTTCGCTGCCTACGGCGCGAATG 5643
Query 141696 ATGCCTGCGTTAATCCCGATACCTGCTCGCTTAGAAACATACTTAACAATAGCAGAGTTT 141755
||| | || || |||||||| || |||| || || || |||||| || | |
Sbjct 5642 CGGCCACCATTGATACCGATACCGGCACGCTGTGACACGTAACGAACAATGGCGCTGGTC 5583
Query 141756 GCATCATTGATTGAGTCAAGGCTGTCACCAGATTCAATAACTACACATGAACTGAATTGA 141815
| ||||||| ||| |||||||| || |||| || | || || || ||||| ||
Sbjct 5582 GTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAACTGG 5523
Query 141816 CGAGTTGGGGTACGAACACCAGCCATAATTGGAGTAGGCAACGAGATTTTACGAGTT--G 141873
||||| || || || || |||||||| || || || ||||| || || || || || |
Sbjct 5522 CGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAATCTT--GAATTGCG 5465
Query 141874 AAACAGCTTCATAAAA 141889
| || || || |||||
Sbjct 5464 ATACGGCGTCGTAAAA 5449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 524920318478800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |