Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_014663.1
Length=169947
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 109 6e-19
>seq2257
Length=8409
Score = 109 bits (120), Expect = 6e-19
Identities = 283/429 (66%), Gaps = 2/429 (0%)
Strand=Plus/Minus
Query 147757 TGAATTCCATAGTCCATGTGACGGATACGGTTTTCTTCAATACCTTTGTTGTTCTTGAGA 147816
|||| || ||||||| |||||| |||||||||||||| | ||| ||||||||| |||
Sbjct 5876 TGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTCTTCAGA 5817
Query 147817 ACCATCA-AGTTCTCACATTCAAGGTGCCAAATCGGCCAGTAGCAAGTTGCCGAACCTTT 147875
|||| || ||| ||| ||| |||||||| || || || | | ||||||| |||
Sbjct 5816 ACCAGCAGTGTTTCCAC-TTCCAGGTGCCACATGGGGTAGAACAAGGTTGCCGCACCACC 5758
Query 147876 ACGAATACCACCCTGTGAACAAGAGTGTACAGCAGCATTTTTAAGTTTCCAGAATGGTGT 147935
||| | || || || || || || | || ||||| | | || |||| ||
Sbjct 5757 ACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAACGGCAG 5698
Query 147936 AACACCGGTGTGCTTAACTTCACCAGGACCAATCTTAGAACCTTCAGCTCGGATTGCTCC 147995
||| ||||| | |||||||| || ||| | ||| | || || || ||
Sbjct 5697 GCAACCCGTGTGTTGTGCTTCACCACCACGAATTTCGCTGCCTACGGCGCGAATGCGGCC 5638
Query 147996 TCCACTGATGCCAATACCTGCTCGTTTAGACACATATTTTACAATAGCTGATGTGGTTTC 148055
||| |||| || ||||| || || | ||||| || ||||| || || || |
Sbjct 5637 ACCATTGATACCGATACCGGCACGCTGTGACACGTAACGAACAATGGCGCTGGTCGTGGC 5578
Query 148056 AGTAATTGATTCTAAATCGTCGCCAGTTTCAATCAATACACACGAACTGAATTGACGTGT 148115
| | || || | |||| || ||| |||| || || || ||||| || || ||
Sbjct 5577 ATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAACTGGCGAGT 5518
Query 148116 TGGAGTCCGGACACCTGCAAGAATAGGAGTTGGCAAACTAATTTTGAATTGCGATGCAGC 148175
|| || || || || || | || || || ||||| ||| |||||||||||| | ||
Sbjct 5517 GGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAATCTTGAATTGCGATACGGC 5458
Query 148176 ATCATAAAA 148184
|| |||||
Sbjct 5457 GTCGTAAAA 5449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543651359937200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |