Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq6307 269 3e-67
seq71 158 2e-33
seq48 143 3e-29
>seq6307
Length=70653
Score = 269 bits (298), Expect = 3e-67
Identities = 823/1279 (64%), Gaps = 63/1279 (5%)
Strand=Plus/Plus
Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAAC 6985
||||| | ||| || ||| || | ||| || |||||||| | ||||| | ||| |
Sbjct 13920 GTCATGACACCGCCGGCAGTCTCAATTCCGAGGGACAGAGGAGCGACGTCGAGGAGGAGA 13979
Query 6986 AGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045
||||| ||||| | |||| || ||||| | | ||||||||| ||||| | || |||
Sbjct 13980 AGGTCCTGAACGGCTTCGCTCTTGTCACCAGAGAGGATGGCGGCCTGGACGGCAGCTCCG 14039
Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105
|| ||||| |||||||||||||| || | || || ||||| || || || | |||
Sbjct 14040 TAGGCGACGGCCTCATCGGGGTTGATGCTCTTGTTAAGTTCCTTGCCAGAGAAGAAGTCC 14099
Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165
|| | | | || | || ||||| || || ||||||||||| | ||||| || |
Sbjct 14100 GAGAGGAGCTTCTGGACCTTGGGGATACGGGTGGATCCACCGACAAGGACGATATCGTGG 14159
Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225
| | || || || ||||| | ||| || | | || || || || ||||| |
Sbjct 14160 ATCTGGGACTTGTCCATCTTGGCGTCACGGATGGCCTTCTCCACGGGGTCCATGGTGCTG 14219
Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285
||||| | || ||||||||||| || || |||||||| ||| || ||||| ||
Sbjct 14220 CGGAAGAGATCAGCGCACAGTTCCTCGAAGCGAGCACGGGTGATGTTGGTGTAGAAGTCG 14279
Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTT---------GTTTGT------------ 7324
|| || ||| | | || || ||||||||| | || ||
Sbjct 14280 ACACCATCGAAGAGGGAGTCGATTTCAATGCTAAAGACAGAAGTAAGTAAATAGCACAGG 14339
Query 7325 -----------------GCCGTCGAAGAT------AACGTTCGCTTTGCGCGCTCACACG 7361
||| ||||| | ||| ||||| ||||| || || |
Sbjct 14340 ATACATCAGCTTACCTAGCCTGAGAAGAGCTGGAGAGCGTACGCTTGGCGCGTTCGCAAG 14399
Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421
| || || | ||| || |||||||| | ||| || | ||| ||||| || || || |
Sbjct 14400 CGGTGCGCAGACGGCGGAGGGCACGGGCGTTGGAGGTGAGATCCTTCTTGTGCTTGCGCT 14459
Query 7422 TAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTG 7481
| ||||| | |||||| | ||||| ||||| || |||||||| | || |
Sbjct 14460 TGAACTCGGCGACGAAGTGGTTGACCAGTCTGTTGTCGAAGTCCTCACCACCAAGATGAG 14519
Query 7482 TATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACAT 7541
| || || || || | |||||||| ||||| || | || ||| | | | |||||||
Sbjct 14520 TGTCTCCGGCAGTAGACTTGACTTCGAAGATTCCGTCCTCGATGGTCAGGATGGAAACAT 14579
Query 7542 CAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CG-TATC--GTCGTCTTTGTTC 7597
| || ||||| || || || || || ||||| ||||| || | || || | ||| |
Sbjct 14580 CGAAGGTACCGCCTCCAAGATCGAAGATGAGCACGTTGCGCTCTCCAGTGGCCTT----C 14635
Query 7598 TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTC 7657
|| || | ||||||||||||||| || || || || || || || || || ||| |||
Sbjct 14636 TTGTCCAAACCGTACGCGATAGCGGCAGCAGTCGGCTCGTTGATGATTCGGAGAACGTTG 14695
Query 7658 AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCC 7717
|| |||||||| | | || || || || || || || || ||||| ||||||||
Sbjct 14696 AGACCAGCAATGGCACCGGCGTCCTTGGTGGCCTGACGCTGGCTGTCGTTGAAGTAGGCG 14755
Query 7718 GGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTC 7777
|| || || | ||| |||||| |||| | |||| || | | || || | || |||
Sbjct 14756 GGCACGGTGATGACAGCGTCCTTGACAATGCTACCCAGGAAGGCCTCGGCAGTTTCCTTC 14815
Query 7778 ATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTA 7837
|| || || || |||||||| || ||||| || | || |||| || || || || ||
Sbjct 14816 ATCTTCGTCAGGACCATCGACGAGATCTCCTCCGGCGTGAACTTCTTGGTCTCGCCCTTG 14875
Query 7838 AAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCT 7897
| || || | | || || | | | ||| || ||||| | | ||| |
Sbjct 14876 TACTCCACCTGGACGCGAGGCTTGCCTCCTTCGTCGGCGACGACCTTGAAGGGCCAGTGC 14935
Query 7898 TTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCA 7957
||||| || || || | || | ||||| | |||||| || ||||| || ||
Sbjct 14936 TTCATGTCCGACTGCACGGCGTCATCGGTGAACTTGCGTCCGATGAGGCGCTTGGCGTCG 14995
Query 7958 AAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGT 8017
|| || ||||| |||||||| || |||||||| || ||||| || || |||||
Sbjct 14996 AACACGGTGTTCACTGGGTTCATCGCCACCTGGTTCTTGGCGGCGTCTCCAATCAGACGC 15055
Query 8018 TCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCG--------ATTCCCTTGGT 8069
|| | || || || ||||||| || || ||||| || || ||||
Sbjct 15056 TC---GGTGTCTGTGAAGCCGACGTAGGAGGGCGTCGTGCGGNNNNNNNNNNACCCTGGT 15112
Query 8070 CGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTC 8129
|||| || || ||||| || | ||| |||| ||||||||||| || || || |
Sbjct 15113 CGTTGGCGATGATTTCCACCTTGCCGTGCATGAAGACACCGACGCACGAGTAGGTCGTGC 15172
Query 8130 CTAAATCAATACCGATTGC 8148
| | || || ||||| ||
Sbjct 15173 CCAGGTCGATTCCGATAGC 15191
>seq71
Length=89762
Score = 158 bits (174), Expect = 2e-33
Identities = 238/338 (70%), Gaps = 3/338 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| ||||| ||||||||||| ||||| || ||| || || || |||| ||
Sbjct 10052 TCGAAGTCTTCGCCACCCAAGTGAGTATCTCCGTTGGTAGCAAGAACCTCGAAGACTCCA 9993
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|| || | | | || || || || |||||||| |||| || || | ||| | |
Sbjct 9992 TTGTCGATCGTGAGGAGAGAGACGTCGAAGGTACCACCTCCCAAATCGAACACGAGGATG 9933
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| || |||| || ||| || || ||||| || ||||| || || || |||||
Sbjct 9932 TTGCGCTCTCCGTCCTT---CTTGTCAAGGCCGTAGGCAATAGCGGCAGCGGTAGGTTCG 9876
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || ||||||| | ||||| |||||||| | ||||| || || || || ||
Sbjct 9875 TTGATGATACGAACAACGTTCAAACCAGCAATGACACCGGCATCCTTGGTGGCCTGACGC 9816
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| | |||||| ||||| || || || || || || |||| | |||||| ||| ||||||
Sbjct 9815 TGGGCATCGTTGAAGTAAGCAGGCACAGTGACAACGGCGTGCTTGACTTCCTTTCCGAGA 9756
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCAT 7794
|||||||| ||||| || ||||| || |||||||||
Sbjct 9755 TACGATTCAGCGATTTCCTTCATCTTTCCAAGAACCAT 9718
Score = 100 bits (110), Expect = 4e-16
Identities = 174/251 (69%), Gaps = 3/251 (1%)
Strand=Plus/Minus
Query 7898 TTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCA 7957
|| |||||||| ||||| | || || || | | || || | |||||| |||||
Sbjct 9570 TTAATATCGTCCTGGACAACCTTCTCGGAGAAATCACGGCCAATCAAACGCTTGGCATCG 9511
Query 7958 AAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGT 8017
|| | ||||||| ||||| ||| ||||||||||| || || || || |||||
Sbjct 9510 AAGATAGTGTTTTCCGGGTTGGTGGTAAGCTGGTTCTTCGCGGCATCTCCAATCAGACGC 9451
Query 8018 TCA--TTATTTTCCG-TAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTC 8074
||| ||| |||| | || || ||||| || ||||| | || || || || |||||
Sbjct 9450 TCACCAGATTCTCCGCTGAAGGCAACGTAGGAAGGGGTGATACGGTTTCCCTGATCGTTG 9391
Query 8075 GCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAA 8134
|| |||||||| ||||| |||| | |||| || ||||| ||||| || || | |
Sbjct 9390 GCGATAATTTCAACGCGTCCGTTCTTGTAGACACCAACGCAACTGTACGTCGTACCAAGA 9331
Query 8135 TCAATACCGAT 8145
|| || |||||
Sbjct 9330 TCGATTCCGAT 9320
>seq48
Length=185442
Score = 143 bits (158), Expect = 3e-29
Identities = 311/456 (68%), Gaps = 12/456 (3%)
Strand=Plus/Minus
Query 7521 CAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCG 7580
||||| |||| | ||||||||||||||| ||||| || |||||| | || || ||||||
Sbjct 29520 CAATGCTTAAGATCGAAACATCAAACGTTCCACCGCCGAGGTCATAGATCAGCACGTTCT 29461
Query 7581 TATCGTCGTCTTTGTTC-TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTA 7639
| ||| | | | | || || || | ||| || || | ||| || || || ||||| ||
Sbjct 29460 TCTCGCCCT-TCAGCTCATTGTCCAAACCATAAGCCAAAGCAGCAGCTGTCGGTTCGTTG 29402
Query 7640 ATAATACGAA-GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTG 7698
|| || || | |||| |||| ||||| || || | || || || || ||||| || ||
Sbjct 29401 ATGATGCGCATGACA-TTCAATCCAGCGATCTTTCCGGCGTCCTTTGTAGCTTGACGCTG 29343
Query 7699 CGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATA 7758
||||| ||||||||||| || || | || |||||| |||| | || | ||
Sbjct 29342 ATTGTCGTTGAAGTAGGCCGGTACAGTGATTACGGCGTCCTTGACCGGGTGGCCCAAGTA 29283
Query 7759 CGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAA 7818
| ||| ||| | || |||||||| || || ||||| || || ||||| | | ||
Sbjct 29282 GGCTTCGGCGGTTTCCTTCATTTTTGTGAGTACCATGGAGCTTATTTCTTCTGGAGTGAA 29223
Query 7819 CTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCG----CAGCACCGG 7874
| ||| |||| || || | || ||||||||||| || || |||| |||| ||
Sbjct 29222 TCGCTTCCTTTCGCCCTTGTATTCGACTTCAATCATCGGCTT-TCCGTTTCCAGCGTCGA 29164
Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934
|| | | | ||| ||| | ||||||||||| || || ||| | ||||
Sbjct 29163 AGACA--CGGA-ACGGCCAGTGTTTCATATCGTTCTGAACGGTCACCTCCTCCATTTTTC 29107
Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTT 7970
||| || || ||||| || || || |||| |||||
Sbjct 29106 GTCCAATGAGGCGCTTAGCGTCGAATACTGAGTTTT 29071
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635073176908400
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