Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq7237 91.5 2e-13 seq2592 87.8 2e-12 >seq7237 Length=102105 Score = 91.5 bits (100), Expect = 2e-13 Identities = 167/240 (70%), Gaps = 16/240 (7%) Strand=Plus/Minus Query 112000 TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCA 112059 |||| |||| | ||||||||||||||||| ||| | |||||||| |||||| | Sbjct 85827 TCGCCATCTACATCGAGCCATGGCACGCGGACATCTTCGAGTTCCT------GCGTCTGA 85774 Query 112060 AC-----CAAGGTGAT--GAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATT 112112 | || | ||| ||||||| ||| ||||||||||||| || |||||||| Sbjct 85773 AGAGGAACACCG-GATCGGAGGAGGAGCGCGCTCGCGATCTCTTCTACGGGCTCTGGATC 85715 Query 112113 CCAGATCTCTTCATGAAGAGAGTTGAGGA-GAGTGGCAATTGGTCTCTCTTTTGTCCAGA 112171 || || | |||||| || | || |||| || | | ||||| ||| | ||||| | Sbjct 85714 CCCGACTTGTTCATGGAGCGTGTCAAGGACGACAAG-GAGTGGTCCCTCATGTGTCCGCA 85656 Query 112172 CAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTA 112231 |||| || || ||| ||| ||| || ||||||| ||||| || ||||| ||||| Sbjct 85655 CAAGTGCCCTGGACTCCACGACGCCTACGGAAAGGAGTTCGAAGCACTTTACACGAAGTA 85596 >seq2592 Length=18905 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263 || || || ||||||||||| || |||||| ||| || | |||||||||||||| || Sbjct 15178 GTGGAAGGCATCTTCTTCTCCGGATCCTTCGCCGCCATCTTCTGGCTCAAGAAGCGCGGC 15119 Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACC 102321 || ||||| || ||| | | |||||| || ||||| || ||||| || ||||||| Sbjct 15118 CTGATGCCCGGCCTCACCCACAGCAACGAACTCATCTCCCGGGACGAAGGCCTCCACC 15061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620684127807200