Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq7237 91.5 2e-13
seq2592 87.8 2e-12
>seq7237
Length=102105
Score = 91.5 bits (100), Expect = 2e-13
Identities = 167/240 (70%), Gaps = 16/240 (7%)
Strand=Plus/Minus
Query 112000 TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCA 112059
|||| |||| | ||||||||||||||||| ||| | |||||||| |||||| |
Sbjct 85827 TCGCCATCTACATCGAGCCATGGCACGCGGACATCTTCGAGTTCCT------GCGTCTGA 85774
Query 112060 AC-----CAAGGTGAT--GAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATT 112112
| || | ||| ||||||| ||| ||||||||||||| || ||||||||
Sbjct 85773 AGAGGAACACCG-GATCGGAGGAGGAGCGCGCTCGCGATCTCTTCTACGGGCTCTGGATC 85715
Query 112113 CCAGATCTCTTCATGAAGAGAGTTGAGGA-GAGTGGCAATTGGTCTCTCTTTTGTCCAGA 112171
|| || | |||||| || | || |||| || | | ||||| ||| | ||||| |
Sbjct 85714 CCCGACTTGTTCATGGAGCGTGTCAAGGACGACAAG-GAGTGGTCCCTCATGTGTCCGCA 85656
Query 112172 CAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTA 112231
|||| || || ||| ||| ||| || ||||||| ||||| || ||||| |||||
Sbjct 85655 CAAGTGCCCTGGACTCCACGACGCCTACGGAAAGGAGTTCGAAGCACTTTACACGAAGTA 85596
>seq2592
Length=18905
Score = 87.8 bits (96), Expect = 2e-12
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263
|| || || ||||||||||| || |||||| ||| || | |||||||||||||| ||
Sbjct 15178 GTGGAAGGCATCTTCTTCTCCGGATCCTTCGCCGCCATCTTCTGGCTCAAGAAGCGCGGC 15119
Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACC 102321
|| ||||| || ||| | | |||||| || ||||| || ||||| || |||||||
Sbjct 15118 CTGATGCCCGGCCTCACCCACAGCAACGAACTCATCTCCCGGGACGAAGGCCTCCACC 15061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620684127807200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |