Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq4628 134 2e-26
>seq4628
Length=2726
Score = 134 bits (148), Expect = 2e-26
Identities = 259/371 (70%), Gaps = 12/371 (3%)
Strand=Plus/Plus
Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562
|| |||||||| ||||| || || | ||| ||||| | || |||||| ||||||
Sbjct 1514 CGGTCGAAACGGCCTGGACGCAGCAACGCAGGGTCAAGCACGTCCGGACGGTTGGTAGCG 1573
Query 11563 GCAATGACTACAATGCCAGTC--TCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620
|| || || | ||||| ||| ||||| ||||| |||||||| || || | |||||
Sbjct 1574 GCGATCACGATGATGCC-GTCGTTCATT-TCGAAGCCGTCCATCTCCACCAGCAACTGGT 1631
Query 11621 TGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCA--CCTGCCGAACGCTTCTTACC 11678
||| ||||| || ||||| || | || | ||| || || ||| | |||
Sbjct 1632 TGAGGGTCTGCTCGCGCTCGTCAT--GACCACCGCCCATGCCGGCGCCACGGTGGCGACC 1689
Query 11679 GACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTG-CCTGTTCGA 11737
||| ||||| || || |||||||| | ||| ||||| || | | || |||| ||||
Sbjct 1690 GACGGCGTCGATTTCGTCGATGAAGATGATGCACGGCGCGT-GCTTCTTGGCCTGCTCGA 1748
Query 11738 AAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAG 11797
| | ||||||||||| | || || ||||| |||||||| |||||||||| | | |
Sbjct 1749 ACATGTCACGTACACGGCTGGCACCGACACCCACGAACATTTCAACGAAGTCGGAACCGG 1808
Query 11798 -AACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTA 11856
|| |||| ||| || || || | |||||| |||||||| || || || ||||||
Sbjct 1809 AAATGGTGAA-GAACGGCACCTTGGCCTCACCCGCGATGGCCTTGGCCAGCAGGGTCTTA 1867
Query 11857 CCCGTACCAGG 11867
|| ||||| ||
Sbjct 1868 CCGGTACCGGG 1878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588920709878000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |