Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_014792.1
Length=169285
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 143 3e-29
>seq2257
Length=8409
Score = 143 bits (158), Expect = 3e-29
Identities = 300/438 (68%), Gaps = 12/438 (3%)
Strand=Plus/Minus
Query 141362 CTGAACACCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCCCTTGTTGTTCTTCAG 141421
||||||||| ||||||| || | || ||||||||||| || || ||||||||||||
Sbjct 5877 CTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTCTTCAG 5818
Query 141422 AACGAGTAAATTTTCAACTTCCAAATGCCATAAAGGATA--ATAAGCAGTAGCAGCGCCG 141479
||| || | |||| ||||||| ||||| | || || | ||| || || || ||
Sbjct 5817 AACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAG--GTTGCCGCACCA 5760
Query 141480 CCACGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATGTTTCCAGAACGGA 141539
||||| | || ||||| || ||||| || || || | ||||| || |||||||
Sbjct 5759 CCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAACGGC 5700
Query 141540 ATAACACCAGTATGCTTGACTTCACCCATACCGATTTTCGAA-CCTTCAGCACGAATCAT 141598
| ||| || || | ||||||| || || ||||| ||| | || |||||
Sbjct 5699 AGGCAACCCGTGTGTTGTGCTTCACCACCAC-GAATTTCGCTGCCTACGGCGCGAATGCG 5641
Query 141599 GCCAACGTTGATACCGATACCCGCCCGCTTACTGATA--TATTCGATGATTGAATTGGCG 141656
|||| | |||||||||||||| || |||| ||| | || | || | |||
Sbjct 5640 GCCACCATTGATACCGATACCGGCACGCT--GTGACACGTAACGAACAATGGCGCTGGTC 5583
Query 141657 GTCTTATTGATTGACTTCAGGGAGTCAGCAGCTTCGATAACCACACAGGAACTGAACTGC 141716
|| |||||| | |||| ||| || |||||| | ||| || || ||||||||
Sbjct 5582 GTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAACTGG 5523
Query 141717 CGGGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGGGCAACGAAA-CCTGTCTTGTGGA 141775
|| || ||||| | |||| |||||||| || |||||||| |||| | || ||| ||
Sbjct 5522 CGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAATCTTGAATTG-CGA 5464
Query 141776 TACTGCATCATAAAAACG 141793
||| || || ||||| ||
Sbjct 5463 TACGGCGTCGTAAAAGCG 5446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 541533158802000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |