Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_015296.1 Length=157061 Score E Sequences producing significant alignments: (Bits) Value seq2257 107 2e-18 >seq2257 Length=8409 Score = 107 bits (118), Expect = 2e-18 Identities = 283/426 (66%), Gaps = 12/426 (3%) Strand=Plus/Minus Query 54192 CAGACGTTCGAACATGACGCGGTTGATCTGAATACCATAGTCGATACGGCGTTCACGGTT 54251 ||| || | | ||| | |||||||||||||| ||| ||||| | | || |||||| Sbjct 5904 CAGGCGCTGGTACAGCAAGCGGTTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTT 5845 Query 54252 CTCTTCAAGACCACGGTTGTTCTTCAGGACCACAACATCATCAAATTGATAATGCCAGAT 54311 ||||| | |||||||||||||||||| |||| | || | || ||||| || Sbjct 5844 TTCTTCCACACCACGGTTGTTCTTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACAT 5785 Query 54312 AGGGATATAGCAA-GTTGCTGATCCGCCACGAATACCGCCTTGAGAGCAAGACTTTAATG 54370 ||| || | ||| ||||| | || ||||| | |||||||| ||||| ||||| | Sbjct 5784 -GGGGTAGAACAAGGTTGCCGCACCACCACGCACGCCGCCTTGCGAGCAGGACTTCA--- 5729 Query 54371 CCCCAGTCAGATATTTTATGAAAGGAAC--CAGG---CCTGTGTGCACCATTTCACCTTT 54425 || ||| | | | | |||| |||| |||| || ||||| |||||| Sbjct 5728 CCGCAGCCTGGAACATCTTGAA--GAACGGCAGGCAACCCGTGTGTTGTGCTTCACCACC 5671 Query 54426 TCGGATAGGGCTACCGATGCCACGAATTGCTCCAACATCAAATCCGATCCCAGCGCGTTT 54485 || || ||| || | | | ||||| ||| ||| | ||||| || || || | Sbjct 5670 ACGAATTTCGCTGCCTACGGCGCGAATGCGGCCACCATTGATACCGATACCGGCACGCTG 5611 Query 54486 GGATACATAATCAACAATACTTTTGGCTGTAGCATTGATTGAGTCCAAAGTGTCACCGGT 54545 || || ||| |||||| ||| || |||||||| ||||| |||| | Sbjct 5610 TGACACGTAACGAACAATGGCGCTGGTCGTGGCATTGATGCTGTCCAGGCTGTCGTCACA 5551 Query 54546 TTTGATAAGAACACAAGAACTGAATTGGCGGGTTGGGGTACGAACGCCGGACATGATGGG 54605 || ||| || || ||||| ||||| ||||| || || || || ||||| | ||||||||| Sbjct 5550 TTCGATCAGCACGCAAGAGCTGAACTGGCGAGTGGGTGTGCGCACGCCAGCCATGATGGG 5491 Query 54606 TGTTGG 54611 || || Sbjct 5490 CGTGGG 5485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 502420030891600