Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_015296.1
Length=157061
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 107 2e-18
>seq2257
Length=8409
Score = 107 bits (118), Expect = 2e-18
Identities = 283/426 (66%), Gaps = 12/426 (3%)
Strand=Plus/Minus
Query 54192 CAGACGTTCGAACATGACGCGGTTGATCTGAATACCATAGTCGATACGGCGTTCACGGTT 54251
||| || | | ||| | |||||||||||||| ||| ||||| | | || ||||||
Sbjct 5904 CAGGCGCTGGTACAGCAAGCGGTTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTT 5845
Query 54252 CTCTTCAAGACCACGGTTGTTCTTCAGGACCACAACATCATCAAATTGATAATGCCAGAT 54311
||||| | |||||||||||||||||| |||| | || | || ||||| ||
Sbjct 5844 TTCTTCCACACCACGGTTGTTCTTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACAT 5785
Query 54312 AGGGATATAGCAA-GTTGCTGATCCGCCACGAATACCGCCTTGAGAGCAAGACTTTAATG 54370
||| || | ||| ||||| | || ||||| | |||||||| ||||| ||||| |
Sbjct 5784 -GGGGTAGAACAAGGTTGCCGCACCACCACGCACGCCGCCTTGCGAGCAGGACTTCA--- 5729
Query 54371 CCCCAGTCAGATATTTTATGAAAGGAAC--CAGG---CCTGTGTGCACCATTTCACCTTT 54425
|| ||| | | | | |||| |||| |||| || ||||| ||||||
Sbjct 5728 CCGCAGCCTGGAACATCTTGAA--GAACGGCAGGCAACCCGTGTGTTGTGCTTCACCACC 5671
Query 54426 TCGGATAGGGCTACCGATGCCACGAATTGCTCCAACATCAAATCCGATCCCAGCGCGTTT 54485
|| || ||| || | | | ||||| ||| ||| | ||||| || || || |
Sbjct 5670 ACGAATTTCGCTGCCTACGGCGCGAATGCGGCCACCATTGATACCGATACCGGCACGCTG 5611
Query 54486 GGATACATAATCAACAATACTTTTGGCTGTAGCATTGATTGAGTCCAAAGTGTCACCGGT 54545
|| || ||| |||||| ||| || |||||||| ||||| |||| |
Sbjct 5610 TGACACGTAACGAACAATGGCGCTGGTCGTGGCATTGATGCTGTCCAGGCTGTCGTCACA 5551
Query 54546 TTTGATAAGAACACAAGAACTGAATTGGCGGGTTGGGGTACGAACGCCGGACATGATGGG 54605
|| ||| || || ||||| ||||| ||||| || || || || ||||| | |||||||||
Sbjct 5550 TTCGATCAGCACGCAAGAGCTGAACTGGCGAGTGGGTGTGCGCACGCCAGCCATGATGGG 5491
Query 54606 TGTTGG 54611
|| ||
Sbjct 5490 CGTGGG 5485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 502420030891600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |