Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq2066 183 7e-41
seq5063 159 8e-34
seq4834 149 1e-30
seq5213 93.3 9e-14
seq471 93.3 9e-14
>seq2066
Length=2850
Score = 183 bits (202), Expect = 7e-41
Identities = 167/211 (79%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| | ||| || |||||||| || || || ||||| || | |||||| | ||||| ||
Sbjct 1 AACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTC 60
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||| ||||| || |||||||| || || ||||| ||||| ||||||||||| ||||||||
Sbjct 61 GAGTTGCTTTCCGGCGAAGATGAGGCGCTGTTGATCTGGGGGAATGCCTTCCTTGTCTTG 120
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
||| || |||||| |||||||||||||| ||| ||| ||||| || || | ||||||
Sbjct 121 AATCTTCGCCTTGACATTCTCAATGGTGTCAGAAGCTTCGACTTCGAGAGTTATCGTCTT 180
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|| ||||| || || ||||| | |||||||
Sbjct 181 GCCAGTCAAGGTCTTCACGAAGATTTGCATT 211
Score = 172 bits (190), Expect = 1e-37
Identities = 169/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||| | ||| ||||||||||| || || ||||| || ||||| || | | || |
Sbjct 1442 AGTCGGAGAACCAGGTGAAGAGTCGATTCCTTTTGGATGTTGTAGTCCGACAATGTGCGG 1501
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
||||| ||||||||||| || |||||||| || || ||||| ||||| |||||||||||
Sbjct 1502 CCATCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGTTGATCTGGGGGAATGCCTTCC 1561
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
||||| || || || |||||||||||| ||||||||||| ||| ||||| |||||
Sbjct 1562 TTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCCGAGGCTTCGACTTCGAGGGTG 1621
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| |||||| || ||||| || || ||||| | |||||
Sbjct 1622 ATCGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 1659
Score = 163 bits (180), Expect = 6e-35
Identities = 167/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||| | ||| |||||||| |||||||| || || || ||||| || | || ||||
Sbjct 853 AGTCGAAGAACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGT 912
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|| |||||||||||||| || |||||||| || ||||| || ||||| || || || ||
Sbjct 913 CCGTCTTCGAGCTGCTTTCCGGCGAAGATGAGGCGTTGCTGATCTGGGGGGATTCCCTCC 972
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|||||||| || || ||||||||||||||||||||| || ||| ||||| || ||
Sbjct 973 TTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGGAGGCTTCGACTTCGAGAGTG 1032
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| |||||| || |||| || || ||||| | |||||
Sbjct 1033 ATCGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1070
Score = 163 bits (180), Expect = 6e-35
Identities = 162/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||||||||| || || || || || ||||| || | || |||| || ||||||
Sbjct 1223 ACCAGGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGTCCGTCTTCG 1282
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || ||||| || ||||| || || || || ||||| ||
Sbjct 1283 AGCTGCTTTCCGGCGAAGATGAGGCGTTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGG 1342
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||||||||| ||||| |||||| |||||||| ||||| | ||||||
Sbjct 1343 ATCTTGGCCTTGACGTTCTCGATGGTATCCGAAGCCTCCACTTCGAGGGTGATCGTCTTG 1402
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|| |||| || || ||||| | |||||||
Sbjct 1403 CCGGTCAGGGTCTTCACGAAGATTTGCATT 1432
Score = 154 bits (170), Expect = 3e-32
Identities = 160/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| | ||| || |||||||| || || || ||||| || | || || | ||||| ||
Sbjct 1945 AACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCCTC 2004
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||| ||||| || |||||||| | || ||||| ||||| ||||| ||||| ||||| ||
Sbjct 2005 GAGTTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGAATTCCTTCCTTGTCCTG 2064
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|| || |||||||||||| ||||||||||| ||| ||||| ||||| | ||||||
Sbjct 2065 GATCTTGGCCTTGACGTTCTCGATGGTGTCCGAGGCTTCGACTTCGAGGGTGATCGTCTT 2124
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| ||||| || || ||||| | |||||
Sbjct 2125 GCCCGTCAAGGTCTTCACGAAGATCTGCAT 2154
Score = 104 bits (114), Expect = 5e-17
Identities = 92/115 (80%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 194996 GCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTT 195055
||||||| |||||||| || || ||||| ||||| ||||||||||| ||||| || ||||
Sbjct 615 GCTTACCGGCGAAGATCAGGCGCTGTTGATCTGGGGGAATGCCTTCCTTGTCCTGGATTT 674
Query 195056 TTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
| ||| || || || ||||| |||||| |||||||| ||||| | ||||||
Sbjct 675 TGGCCTTCACATTTTCGATGGTATCCGAAGCCTCCACTTCGAGGGTGATCGTCTT 729
>seq5063
Length=4177
Score = 159 bits (176), Expect = 8e-34
Identities = 162/211 (77%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| ||||| || || ||||| || || || ||||| |||| |||||| | ||||| ||
Sbjct 2228 AACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTC 2287
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||| ||||| || |||||||| | || ||||| ||||| ||||| ||||||||||| ||
Sbjct 2288 GAGTTGCTTTCCGGCGAAGATCAAGCGCTGTTGATCTGGGGGAATTCCTTCTTTGTCCTG 2347
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|| || |||||||||||| || ||||| || ||| ||||| ||||| | ||||||
Sbjct 2348 GATCTTGGCCTTGACGTTCTCGATCGTGTCGGAGGCTTCGACTTCGAGGGTGATCGTCTT 2407
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|| || | ||| || || || | |||||||
Sbjct 2408 GCCGGTGAGAGTCTTCACAAAGATTTGCATT 2438
Score = 152 bits (168), Expect = 1e-31
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||||||||| || || || || || ||||| || | || || | ||||| |||
Sbjct 2605 ACCAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCCTCG 2664
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| ||||| || |||||||| | || ||||| ||||| ||||| ||||| ||||| ||
Sbjct 2665 AGTTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGAATTCCTTCCTTGTCCTGG 2724
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||||||||| |||||||| || ||| ||||| ||||| | ||||||
Sbjct 2725 ATCTTGGCCTTGACGTTCTCGATGGTGTCGGAGGCTTCGACTTCGAGGGTGATCGTCTTG 2784
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||| || || ||||| | ||||||
Sbjct 2785 CCGGTCAGGGTCTTCACGAAGATTTGCAT 2813
Score = 147 bits (162), Expect = 5e-30
Identities = 143/184 (78%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| ||||||||||||||||| || || || ||||| |||| ||||| | ||| |||||
Sbjct 1685 AACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGCCCGTCTTC 1744
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||||||||| || || ||||| || || || || || || || || || || ||||| ||
Sbjct 1745 GAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCGGGTGGGATTCCCTCCTTGTCCTG 1804
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
||| || ||| || || |||||||||||||| ||| |||||||| || | |||||
Sbjct 1805 AATCTTGGCCTTCACATTTTCAATGGTGTCCGAGGCTTCGACTTCAAGAGTGATGGTCTT 1864
Query 195111 TCCT 195114
||||
Sbjct 1865 TCCT 1868
Score = 131 bits (144), Expect = 4e-25
Identities = 126/162 (78%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981
||||| | ||| | ||| || |||||||| || || || ||||| || | || || |
Sbjct 3162 GAGTCGGAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACG 3221
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
|| |||||||||||||| || || ||||| || ||||| |||||||| || || |||||
Sbjct 3222 TCCGTCTTCGAGCTGCTTTCCGGCAAAGATGAGGCGTTGCTGGTCTGGGGGGATTCCTTC 3281
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGA 195083
|||||||| || || |||||||||||| |||||||||||
Sbjct 3282 CTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCCGA 3323
Score = 104 bits (114), Expect = 5e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||||||||||||||| || || |||||||| || | ||||| | ||| ||||||
Sbjct 1916 ACGAGGTGAAGAGTGGACTCCTTCTGGATATTGTAGTCCGAGAGAGTGCGCCCGTCTTCG 1975
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| || || || || || || || || || || ||||| |||
Sbjct 1976 AGCTGCTTTCCGGCAAAGATGAGGCGCTGCTGATCGGGTGGGATTCCCTCCTTGTCCTGA 2035
Query 195052 AT 195053
||
Sbjct 2036 AT 2037
>seq4834
Length=88581
Score = 149 bits (164), Expect = 1e-30
Identities = 159/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| | ||| ||||||||||| || || || ||||| |||| | || | || || ||
Sbjct 22335 AACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGATAACGTGCGGCCGTCCTC 22394
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||||||||| || |||||||| || ||||| ||||| ||||| |||||||| || |||||
Sbjct 22395 GAGCTGCTTTCCGGCGAAGATGAGGCGTTGCTGGTCCGGAGGGATGCCTTCCTTATCTTG 22454
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
||| || ||| |||||||| || || ||||| ||| ||||||||||| | |||||
Sbjct 22455 AATCTTCGCCTTCACGTTCTCGATAGTATCCGAGGCTTCGACTTCAAGGGTGATTGTCTT 22514
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || ||||| | |||||
Sbjct 22515 CCCGGTAAGCGTCTTCACGAAGATCTGCAT 22544
Score = 102 bits (112), Expect = 2e-16
Identities = 110/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054
||| |||| |||||||| || || || ||||| ||||| |||||||| || || || ||
Sbjct 21469 TGCATACCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCTTCCTTATCCTGGATC 21528
Query 195055 TTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114
|| |||||||||||| || |||||||| ||| ||||| ||||| | ||||| ||
Sbjct 21529 TTGGCCTTGACGTTCTCGATTGTGTCCGAGGCTTCGACTTCGAGGGTGATGGTCTTCCCG 21588
Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||| || || || | |||||
Sbjct 21589 GTAAGAGTCTTGACAAAGATCTGCAT 21614
>seq5213
Length=43260
Score = 93.3 bits (102), Expect = 9e-14
Identities = 111/149 (74%), Gaps = 4/149 (3%)
Strand=Plus/Plus
Query 194996 GCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTT 195055
||||||| || ||||| || || ||||| || | ||| |||||||| ||||| || || |
Sbjct 11231 GCTTACCGGCAAAGATCAGGCGCTGTTGATCGGAAGGGATGCCTTCCTTGTCCTGGATCT 11290
Query 195056 TT-TG---CTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
| || |||||||||||| || || |||||| ||| ||||| | ||| ||||||
Sbjct 11291 TCCTGGGCCTTGACGTTCTCGATCGTATCCGAAGCTTCGACTTCGCGACTAATGGTCTTT 11350
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || || || || || | ||||||
Sbjct 11351 CCGGTAAACGTCTTGACAAAGATTTGCAT 11379
>seq471
Length=2147
Score = 93.3 bits (102), Expect = 9e-14
Identities = 108/146 (74%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 194996 GCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTT 195055
||||||| || ||||| || || ||||| || || || || || || || || || ||||
Sbjct 1948 GCTTACCGGCAAAGATCAGGCGCTGTTGATCAGGTGGGATTCCCTCCTTATCCTGGATTT 2007
Query 195056 TTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTG 195115
| ||| || || || ||||| |||||| ||| |||||||| || | ||||||||||
Sbjct 2008 TGGCCTTCACATTTTCGATGGTATCCGAAGCTTCGACTTCAAGAGTGATGGTCTTTCCTG 2067
Query 195116 TCAAAGTTTTTACGAACACTTGCATT 195141
| | || || ||||| | ||||||
Sbjct 2068 TGAGCGTCTTGACGAAGATCTGCATT 2093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109374843600170
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