Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq4834 93.3 3e-13 seq48 87.8 1e-11 >seq4834 Length=88581 Score = 93.3 bits (102), Expect = 3e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||||||||| | ||| || ||| || || || ||||| || | | |||||| Sbjct 21714 AGACGGAGTACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAAAGTTCTG 21773 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||||||| || |||||||| ||||| || | ||||| |||||||| || ||||| Sbjct 21774 CCATCTTCAAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCAGGAGGGATGCCTTCC 21833 Query 563377 TTATCTTGAAT 563387 ||||||||||| Sbjct 21834 TTATCTTGAAT 21844 >seq48 Length=185442 Score = 87.8 bits (96), Expect = 1e-11 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 550322 CCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTT 550381 |||||| |||| || ||||| | | |||||||| |||| ||| || | | Sbjct 29229 CCAGAAGAAATAAGCTCCATGGTACTCACAAAAATGAAGGAAACCGCCGAAGCCTACTTG 29288 Query 550382 GGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGT 550441 || || || | ||| || ||||| |||||||| || || || || ||| || ||| Sbjct 29289 GGCCACCCGGTCAAGGACGCCGTAATCACTGTACCGGCCTACTTCAACGACAATCAGCGT 29348 Query 550442 CAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAA 550501 |||||||| || || || ||| || |||||| | ||||| | || || ||||| ||| Sbjct 29349 CAAGCTACAAAGGACGCCGGAAAGATCGCTGGATTGAATGTCATGCGCATCATCAACGAA 29408 Query 550502 CCTACTGCTGCTGCACTTGCATATGG 550527 || || |||||||| | || ||||| Sbjct 29409 CCGACAGCTGCTGCTTTGGCTTATGG 29434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028898837329900