Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq4834 93.3 3e-13
seq48 87.8 1e-11
>seq4834
Length=88581
Score = 93.3 bits (102), Expect = 3e-13
Identities = 99/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316
||||||||||| | ||| || ||| || || || ||||| || | | ||||||
Sbjct 21714 AGACGGAGTACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAAAGTTCTG 21773
Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376
||||||||| || |||||||| ||||| || | ||||| |||||||| || |||||
Sbjct 21774 CCATCTTCAAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCAGGAGGGATGCCTTCC 21833
Query 563377 TTATCTTGAAT 563387
|||||||||||
Sbjct 21834 TTATCTTGAAT 21844
>seq48
Length=185442
Score = 87.8 bits (96), Expect = 1e-11
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 550322 CCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTT 550381
|||||| |||| || ||||| | | |||||||| |||| ||| || | |
Sbjct 29229 CCAGAAGAAATAAGCTCCATGGTACTCACAAAAATGAAGGAAACCGCCGAAGCCTACTTG 29288
Query 550382 GGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGT 550441
|| || || | ||| || ||||| |||||||| || || || || ||| || |||
Sbjct 29289 GGCCACCCGGTCAAGGACGCCGTAATCACTGTACCGGCCTACTTCAACGACAATCAGCGT 29348
Query 550442 CAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAA 550501
|||||||| || || || ||| || |||||| | ||||| | || || ||||| |||
Sbjct 29349 CAAGCTACAAAGGACGCCGGAAAGATCGCTGGATTGAATGTCATGCGCATCATCAACGAA 29408
Query 550502 CCTACTGCTGCTGCACTTGCATATGG 550527
|| || |||||||| | || |||||
Sbjct 29409 CCGACAGCTGCTGCTTTGGCTTATGG 29434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4028898837329900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |