Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_016073.1 Length=157950 Score E Sequences producing significant alignments: (Bits) Value seq2257 118 1e-21 >seq2257 Length=8409 Score = 118 bits (130), Expect = 1e-21 Identities = 283/425 (67%), Gaps = 10/425 (2%) Strand=Plus/Minus Query 53892 CAGGCGCTCGAACATGACGCGGTTAATCTGAATCCCATAGTCGATACGGCGTTCACGGTT 53951 |||||||| | ||| | |||||| ||||||| || ||||| | | || |||||| Sbjct 5904 CAGGCGCTGGTACAGCAAGCGGTTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTT 5845 Query 53952 CTCTTCCAATCCACGGTTGTTTTTGAGAACAACGACATCATCAAATTGATAATGCCAGAT 54011 ||||||| ||||||||||| || ||||| | | || | || ||||| || Sbjct 5844 TTCTTCCACACCACGGTTGTTCTTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACAT 5785 Query 54012 GGG----AACATAGCATGTTGCCGATCCACCACGGATACCGCCTTGAGAGCAAGACTTCA 54067 ||| |||| | ||||||| |||||||| | |||||||| ||||| ||||||| Sbjct 5784 GGGGTAGAACA----AGGTTGCCGCACCACCACGCACGCCGCCTTGCGAGCAGGACTTCA 5729 Query 54068 GGGCA-CCAGTCAAATACTTGATGAATGGAACCAGACCTGTATGGACCATTTCCCCTTTA 54126 ||| || | | || ||||| ||| || | ||| || || ||| || | Sbjct 5728 CCGCAGCCTGGAACAT-CTTGAAGAACGGCAGGCAACCCGTGTGTTGTGCTTCACCACCA 5670 Query 54127 CGGATAGGGCTACCGATGCCACGAATTGCCCCAACATCGAATCCGATGCCAGCACGTTTG 54186 || || ||| || | | | ||||| ||| ||| || ||||| || ||||| | Sbjct 5669 CGAATTTCGCTGCCTACGGCGCGAATGCGGCCACCATTGATACCGATACCGGCACGCTGT 5610 Query 54187 GAAACATAATCCACGATGCTTTTCGCAGTGGCATTAATTGAGTCCAATGTGTCACCAGTT 54246 || || ||| || ||| | | |||||||| || ||||| |||| || | Sbjct 5609 GACACGTAACGAACAATGGCGCTGGTCGTGGCATTGATGCTGTCCAGGCTGTCGTCACAT 5550 Query 54247 TTGATCAATACACAAGAGCTGAACTGTCGGGTCGGGGTGCGGACGCCGGACATAATAGGT 54306 | ||||| || |||||||||||||| || || || ||||| ||||| | ||| || || Sbjct 5549 TCGATCAGCACGCAAGAGCTGAACTGGCGAGTGGGTGTGCGCACGCCAGCCATGATGGGC 5490 Query 54307 GTTGG 54311 || || Sbjct 5489 GTGGG 5485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505264563836000