Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_016571.1
Length=284757
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 354 1e-92
>seq2257
Length=8409
Score = 354 bits (392), Expect = 1e-92
Identities = 727/1072 (68%), Gaps = 19/1072 (2%)
Strand=Plus/Minus
Query 207861 GAGTCGATCTGACCTACCAGGTAAGAAGAAACTTCTACTTCCTGAGGAGCAACCTGAACG 207920
|| ||||||||||| ||||||||||| | ||| || || ||||| || ||||| |||
Sbjct 8252 GAATCGATCTGACCGACCAGGTAAGAGCTCAGTTCCACCTCTTGAGGTGCCACCTGTACG 8193
Query 207921 TTGTCAGTTACCAGCCATGAGTTAATCCATGGAATTGGGTTAGAGTTG---GTTTTGAAT 207977
|||| | || ||| | ||| ||||||||||| ||||| ||| | | ||
Sbjct 8192 GTGTCCGAGGACAACCAGGTGTTGATCCATGGAATGGGGTTGTGTTTGACAGACTCAAAC 8133
Query 207978 GGAAGATCCAAACCGATCGCCTGCATACGGATGTTGGTAATGTACTCAACATACTGGCAG 208037
| | | | || || | || ||||||||| ||||| |||||||| || ||||| |
Sbjct 8132 GCAGGCTTCAGGCCCACTGCACCCATACGGATATTGGTGATGTACTCCACGTACTGACCC 8073
Query 208038 AGGATCTCTTTGTTCAGACCGATCATTGAACCATCTTTGAACAGATAGTCAGCCCACTCT 208097
|| || || |||||||| || ||||| ||||| || |||||| || || ||||||| |
Sbjct 8072 AGAATGTCCTTGTTCAGGCCAATCATGGAACCGTCGCGGAACAGGTAATCCGCCCACTGT 8013
Query 208098 TTTTCTTGCTGAGCGGTAGCAACGAACATGTCGTATGACTCTTGACGACACTCTGCT-GC 208156
||||| |||| || | | | ||||||||| | | | | | || | || ||
Sbjct 8012 TTTTCCTGCTCGGCCGCATCCTTGAACATGTCAAAGCAGACCGG-CTCCAGTTCGCGCGC 7954
Query 208157 AATCTCAGCCATCTCTGGATCATCTTTACCAGAGTTCATCAGGTTGATGATGTGCTGAGT 208216
|||| ||| | ||| || || || | || || || | ||||||||||| || ||
Sbjct 7953 GATCTGAGCGAACTCAGGGTCGTCGCTGCCGGAACGCAGAATATTGATGATGTGTTGCGT 7894
Query 208217 ACCAACCATGTGAAGTGCTTCGTCACGTGCGATCATTTTGATGATCTTAGCGTTACCTTC 208276
||| || || || ||||| ||||| || |||| |||||||| || || |||||
Sbjct 7893 GCCAGTCAGATGCAGCGCTTCATCACGCGCAATCAAGCGAATGATCTTGGCATTGCCTTC 7834
Query 208277 CATCAGCTTACGTTCGGCAAATGCGAATGAGCAAGCGAAGGATACGTAGAAACGAATAGC 208336
||||||||| || |||||||| ||||| ||||| || ||| ||||| || || || ||
Sbjct 7833 CATCAGCTTGCGCTCGGCAAAGGCGAAGGAGCAGGCAAAGCTGACGTAAAAGCGGATGGC 7774
Query 208337 TTCAAGTGAGTTGATAG--AT--TGCAGAGCCAGGTACAGTGCTTTCTTAATAGCACGAA 208392
||||| |||| || |||| ||||||||| ||||| | || || |
Sbjct 7773 CTCAAGAATATTGACGCTCATCATGCA----CAGGTACAGCTTCTTCTTCA--GCTCGTA 7720
Query 208393 GA---TTAACATTAACCTTCTCGCCATTGACTACGTGGTCACCCAGACCCAGGTAATAGT 208449
|| ||| | | || || || |||| | |||| || || |||||| | ||
Sbjct 7719 GACGCTTAGCGTACGGGTT-TCACCGTTGATTTCGTGTTCGCCTGCACCCAGCTGGGCGT 7661
Query 208450 ACTGGTTGATCAAGGCAATCAGTTTGTCGTAGTAATGGGAAACAGATGCAGCACGTTTCT 208509
|| | || | | ||||| | ||||||||| ||||| || ||||| ||
Sbjct 7660 ACAGCATGGTGTCGCTGATCAGATCGTCGTAGTACGAGGAAATGTCGGCGGCACGCAGCT 7601
Query 208510 TGATATGTTCGTTATCTACAACGTCATCAAAGACAATGGAAGGATCGTTAACGATGTTCC 208569
|| | ||||| || | ||| ||||| | || ||| || || || | || || |
Sbjct 7600 GAATGTTCTCGTTGCGCACGATGTCGTCAAAAATAACGGACGGGTCATTGGCAATATTGC 7541
Query 208570 TGATGATGTGAGTATAGCTACGACTGTGGATGGTTTCAGAGAAGCCCCAGGTCTCAGCCC 208629
|||||||| || || || ||| || || || ||||| ||||||| ||| ||
Sbjct 7540 GAATGATGTGCGTGTACGAGCGCGAGTGAATCGTCTCGGAGAAAGCCCAGGTTTCAATCC 7481
Query 208630 ATGTTTCCAGCTCTGGGATAGAGCAGATCGGGAGTAATGCAACGTTTGGACCACGGCCCT 208689
| ||||||||||| || || || | || || || || ||||| || | |||||||
Sbjct 7480 AGGTTTCCAGCTCCGGAATCGATACCAAAGGCAGGAAGGCCACGTTGGGGCTGCGGCCCT 7421
Query 208690 GGATAGAGTCCAGTAGTGTCTGATATTTCAGGTTACTGATGAACAGGTGTTTCTCGTGAT 208749
|||| || ||||| | |||||||| ||||| || |||||||| | ||| || ||||| |
Sbjct 7420 GGATGGAATCCAGCAAGGTCTGATACTTCAGATTGCTGATGAAAATGTGCTTTTCGTGGT 7361
Query 208750 CTGGTAAAGCCATGTAGTCAATACGGTCACGGGAGACATCTACTTCTTCAGGACGCCAGA 208809
| || | | ||||| || ||||| ||| | || ||||| || ||||||||||
Sbjct 7360 CAGGCAGGTTCTGATAGTCGATCCGGTCCTGGGTAATGTCCACTTCCTCCGGACGCCAGA 7301
Query 208810 AGAAAGAAAGTTGTTTCTCAATGAGTTTCTCAAAGATCTCATACTTCTGTTGGTCGTAAC 208869
|||| || | || || ||||| || || ||||| ||| ||| || || |||||||| |
Sbjct 7300 AGAAGGACAACTGCTTTTCAATCAGCTTTTCAAAAATCGGATATTTTTGCTGGTCGTAGC 7241
Query 208870 GAGAAACGTTGACGTTTTGACCCAGGAACATGTGTTCTTGTAATTGATCGTT 208921
||| ||||| || || || | ||||||| |||||| | || |||||
Sbjct 7240 GAGCCACGTTAACCGGCTGCCCAAAGAACATGGGTTCTTTGAGCTGGTCGTT 7189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 911008871013200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |