Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_016571.1 Length=284757 Score E Sequences producing significant alignments: (Bits) Value seq2257 354 1e-92 >seq2257 Length=8409 Score = 354 bits (392), Expect = 1e-92 Identities = 727/1072 (68%), Gaps = 19/1072 (2%) Strand=Plus/Minus Query 207861 GAGTCGATCTGACCTACCAGGTAAGAAGAAACTTCTACTTCCTGAGGAGCAACCTGAACG 207920 || ||||||||||| ||||||||||| | ||| || || ||||| || ||||| ||| Sbjct 8252 GAATCGATCTGACCGACCAGGTAAGAGCTCAGTTCCACCTCTTGAGGTGCCACCTGTACG 8193 Query 207921 TTGTCAGTTACCAGCCATGAGTTAATCCATGGAATTGGGTTAGAGTTG---GTTTTGAAT 207977 |||| | || ||| | ||| ||||||||||| ||||| ||| | | || Sbjct 8192 GTGTCCGAGGACAACCAGGTGTTGATCCATGGAATGGGGTTGTGTTTGACAGACTCAAAC 8133 Query 207978 GGAAGATCCAAACCGATCGCCTGCATACGGATGTTGGTAATGTACTCAACATACTGGCAG 208037 | | | | || || | || ||||||||| ||||| |||||||| || ||||| | Sbjct 8132 GCAGGCTTCAGGCCCACTGCACCCATACGGATATTGGTGATGTACTCCACGTACTGACCC 8073 Query 208038 AGGATCTCTTTGTTCAGACCGATCATTGAACCATCTTTGAACAGATAGTCAGCCCACTCT 208097 || || || |||||||| || ||||| ||||| || |||||| || || ||||||| | Sbjct 8072 AGAATGTCCTTGTTCAGGCCAATCATGGAACCGTCGCGGAACAGGTAATCCGCCCACTGT 8013 Query 208098 TTTTCTTGCTGAGCGGTAGCAACGAACATGTCGTATGACTCTTGACGACACTCTGCT-GC 208156 ||||| |||| || | | | ||||||||| | | | | | || | || || Sbjct 8012 TTTTCCTGCTCGGCCGCATCCTTGAACATGTCAAAGCAGACCGG-CTCCAGTTCGCGCGC 7954 Query 208157 AATCTCAGCCATCTCTGGATCATCTTTACCAGAGTTCATCAGGTTGATGATGTGCTGAGT 208216 |||| ||| | ||| || || || | || || || | ||||||||||| || || Sbjct 7953 GATCTGAGCGAACTCAGGGTCGTCGCTGCCGGAACGCAGAATATTGATGATGTGTTGCGT 7894 Query 208217 ACCAACCATGTGAAGTGCTTCGTCACGTGCGATCATTTTGATGATCTTAGCGTTACCTTC 208276 ||| || || || ||||| ||||| || |||| |||||||| || || ||||| Sbjct 7893 GCCAGTCAGATGCAGCGCTTCATCACGCGCAATCAAGCGAATGATCTTGGCATTGCCTTC 7834 Query 208277 CATCAGCTTACGTTCGGCAAATGCGAATGAGCAAGCGAAGGATACGTAGAAACGAATAGC 208336 ||||||||| || |||||||| ||||| ||||| || ||| ||||| || || || || Sbjct 7833 CATCAGCTTGCGCTCGGCAAAGGCGAAGGAGCAGGCAAAGCTGACGTAAAAGCGGATGGC 7774 Query 208337 TTCAAGTGAGTTGATAG--AT--TGCAGAGCCAGGTACAGTGCTTTCTTAATAGCACGAA 208392 ||||| |||| || |||| ||||||||| ||||| | || || | Sbjct 7773 CTCAAGAATATTGACGCTCATCATGCA----CAGGTACAGCTTCTTCTTCA--GCTCGTA 7720 Query 208393 GA---TTAACATTAACCTTCTCGCCATTGACTACGTGGTCACCCAGACCCAGGTAATAGT 208449 || ||| | | || || || |||| | |||| || || |||||| | || Sbjct 7719 GACGCTTAGCGTACGGGTT-TCACCGTTGATTTCGTGTTCGCCTGCACCCAGCTGGGCGT 7661 Query 208450 ACTGGTTGATCAAGGCAATCAGTTTGTCGTAGTAATGGGAAACAGATGCAGCACGTTTCT 208509 || | || | | ||||| | ||||||||| ||||| || ||||| || Sbjct 7660 ACAGCATGGTGTCGCTGATCAGATCGTCGTAGTACGAGGAAATGTCGGCGGCACGCAGCT 7601 Query 208510 TGATATGTTCGTTATCTACAACGTCATCAAAGACAATGGAAGGATCGTTAACGATGTTCC 208569 || | ||||| || | ||| ||||| | || ||| || || || | || || | Sbjct 7600 GAATGTTCTCGTTGCGCACGATGTCGTCAAAAATAACGGACGGGTCATTGGCAATATTGC 7541 Query 208570 TGATGATGTGAGTATAGCTACGACTGTGGATGGTTTCAGAGAAGCCCCAGGTCTCAGCCC 208629 |||||||| || || || ||| || || || ||||| ||||||| ||| || Sbjct 7540 GAATGATGTGCGTGTACGAGCGCGAGTGAATCGTCTCGGAGAAAGCCCAGGTTTCAATCC 7481 Query 208630 ATGTTTCCAGCTCTGGGATAGAGCAGATCGGGAGTAATGCAACGTTTGGACCACGGCCCT 208689 | ||||||||||| || || || | || || || || ||||| || | ||||||| Sbjct 7480 AGGTTTCCAGCTCCGGAATCGATACCAAAGGCAGGAAGGCCACGTTGGGGCTGCGGCCCT 7421 Query 208690 GGATAGAGTCCAGTAGTGTCTGATATTTCAGGTTACTGATGAACAGGTGTTTCTCGTGAT 208749 |||| || ||||| | |||||||| ||||| || |||||||| | ||| || ||||| | Sbjct 7420 GGATGGAATCCAGCAAGGTCTGATACTTCAGATTGCTGATGAAAATGTGCTTTTCGTGGT 7361 Query 208750 CTGGTAAAGCCATGTAGTCAATACGGTCACGGGAGACATCTACTTCTTCAGGACGCCAGA 208809 | || | | ||||| || ||||| ||| | || ||||| || |||||||||| Sbjct 7360 CAGGCAGGTTCTGATAGTCGATCCGGTCCTGGGTAATGTCCACTTCCTCCGGACGCCAGA 7301 Query 208810 AGAAAGAAAGTTGTTTCTCAATGAGTTTCTCAAAGATCTCATACTTCTGTTGGTCGTAAC 208869 |||| || | || || ||||| || || ||||| ||| ||| || || |||||||| | Sbjct 7300 AGAAGGACAACTGCTTTTCAATCAGCTTTTCAAAAATCGGATATTTTTGCTGGTCGTAGC 7241 Query 208870 GAGAAACGTTGACGTTTTGACCCAGGAACATGTGTTCTTGTAATTGATCGTT 208921 ||| ||||| || || || | ||||||| |||||| | || ||||| Sbjct 7240 GAGCCACGTTAACCGGCTGCCCAAAGAACATGGGTTCTTTGAGCTGGTCGTT 7189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 911008871013200