Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_017972.1
Length=280538
Score E
Sequences producing significant alignments: (Bits) Value
seq1179 149 1e-30
>seq1179
Length=465
Score = 149 bits (164), Expect = 1e-30
Identities = 193/264 (73%), Gaps = 2/264 (1%)
Strand=Plus/Plus
Query 22960 TAGGAAACTTCGCACTCTTCATCAGATTCAAAGAACAGAATTTGTGCGCAACCTTCGCCA 23019
||||| |||||||||||||| || || || | |||||| || || || ||||||
Sbjct 138 TAGGACACTTCGCACTCTTCGTCGGACTCCAGGAACAGCATCTGCGCCACGCCTTCGTTG 197
Query 23020 GCGTAGATCAGTGCCGGGCTTGGT-GTGGTATTGGAAAACTCCAGAGTAAGCGAGCCTTT 23078
||||||||| || | ||| ||| ||||| ||||| |||||||| || | |||||
Sbjct 198 GCGTAGATC-TTGGCCGGCAGGGTGGTGGTGTTGGAGAACTCCAGGGTCACGTGGCCTTC 256
Query 23079 CCATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGTCGATTT 23138
||| || || || ||||| |||||||| ||||||||||||||||| ||||| || ||
Sbjct 257 CCACTCCGGCTCGAGCGGGGTGACGTTGACGATGATGCCGCAACGGGCATAGGTGCTCTT 316
Query 23139 GCCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTTTGCCAG 23198
||| |||||||| | |||| ||||| ||| ||||| || ||| |||||
Sbjct 317 GCCCAGGCAGATGGTCAGCACGTTGCGCGGGATGCGGAAGTACTCGACGGTGCGCGCCAG 376
Query 23199 TGCGAAACTGTTCGGCGGAATGAT 23222
||||| ||| ||||| |||||
Sbjct 377 GGCGAAGGAGTTGGGCGGGATGAT 400
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 897509338400800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |