Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq1179 149 1e-30 >seq1179 Length=465 Score = 149 bits (164), Expect = 1e-30 Identities = 193/264 (73%), Gaps = 2/264 (1%) Strand=Plus/Plus Query 22960 TAGGAAACTTCGCACTCTTCATCAGATTCAAAGAACAGAATTTGTGCGCAACCTTCGCCA 23019 ||||| |||||||||||||| || || || | |||||| || || || |||||| Sbjct 138 TAGGACACTTCGCACTCTTCGTCGGACTCCAGGAACAGCATCTGCGCCACGCCTTCGTTG 197 Query 23020 GCGTAGATCAGTGCCGGGCTTGGT-GTGGTATTGGAAAACTCCAGAGTAAGCGAGCCTTT 23078 ||||||||| || | ||| ||| ||||| ||||| |||||||| || | ||||| Sbjct 198 GCGTAGATC-TTGGCCGGCAGGGTGGTGGTGTTGGAGAACTCCAGGGTCACGTGGCCTTC 256 Query 23079 CCATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGTCGATTT 23138 ||| || || || ||||| |||||||| ||||||||||||||||| ||||| || || Sbjct 257 CCACTCCGGCTCGAGCGGGGTGACGTTGACGATGATGCCGCAACGGGCATAGGTGCTCTT 316 Query 23139 GCCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTTTGCCAG 23198 ||| |||||||| | |||| ||||| ||| ||||| || ||| ||||| Sbjct 317 GCCCAGGCAGATGGTCAGCACGTTGCGCGGGATGCGGAAGTACTCGACGGTGCGCGCCAG 376 Query 23199 TGCGAAACTGTTCGGCGGAATGAT 23222 ||||| ||| ||||| ||||| Sbjct 377 GGCGAAGGAGTTGGGCGGGATGAT 400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897509338400800