Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_017981.1 Length=49981 Score E Sequences producing significant alignments: (Bits) Value seq5432 145 2e-30 >seq5432 Length=1936 Score = 145 bits (160), Expect = 2e-30 Identities = 194/268 (72%), Gaps = 4/268 (1%) Strand=Plus/Plus Query 25950 CATCTGCATGGTTCCGCCAACGTTGACCACAATTTCAGTGGTGTAGCGCTCAACGCCGTC 26009 || ||||||||| || | || ||| | || || |||||||| |||| | |||||| Sbjct 164 CAGCTGCATGGTGCCCTGCATGTCGACGATGATCTCGGTGGTGTAACGCTTGATGCCGTC 223 Query 26010 CTTTTCCCACTTGCGGGTTTTCAGTTGCCCCTCAATGTAAACCTGTGAACCTTTCTTCAG 26069 ||||||||||| |||||| | ||| | ||||| ||||| ||||| ||||| || ||| Sbjct 224 CTTTTCCCACTCGCGGGTCTGCAGCTTGCCCTCGATGTACACCTGCGAACCCTTGCGCAG 283 Query 26070 GTACTCGCCCGCGATCTCCGCTACCTTGCCAAACAGCACGACGCGATGCCATTCTGTCAC 26129 ||||||||| || ||||| || |||||||| |||| | || || ||||| || || Sbjct 284 GTACTCGCCGGCAATCTCGGCAACCTTGCCGAACATCGAAACACGGTGCCACTCGGTACG 343 Query 26130 TTCTTTCTTTTCGCCGGTCTGCTTATCGTTCCA--GCTTTCTGAGGTCGCTACGGTAATG 26187 || ||| | |||||||||||| ||| |||| ||| || ||| || | | | | | Sbjct 344 CTCGACCTTCTGGCCGGTCTGCTTGTCGGTCCACTGCTCGCT--GGTGGCCAGGCTGAGG 401 Query 26188 TTGGCGACTGCGCCGCCATTAGGCATGT 26215 |||| || ||| ||| || |||| || Sbjct 402 TTGGTCACCGCGTTGCCGTTGGGCAGGT 429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159803347266660