Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_018088.1 Length=104936 Score E Sequences producing significant alignments: (Bits) Value seq2257 179 2e-40 >seq2257 Length=8409 Score = 179 bits (198), Expect = 2e-40 Identities = 349/513 (68%), Gaps = 2/513 (0%) Strand=Plus/Plus Query 71152 TCATTACCAACACCTATTATGGGTGGTGTACGTACTCCAACAAGACAATTTAGTAGTTGT 71211 || || || || || || |||| ||| || || || || || | || || || ||| Sbjct 5479 TCCTTGCCCACGCCCATCATGGCTGGCGTGCGCACACCCACTCGCCAGTTCAGCTCTTGC 5538 Query 71212 GTAAAGATTGACAGTGGCGATAGCCTAGATTCAATTAATGCCTCTTCAAGTTCAATTGTT 71271 || ||| || ||| ||| ||||| || || |||||| | | || | |||||| Sbjct 5539 GTGCTGATCGAATGTGACGACAGCCTGGACAGCATCAATGCCACGACCAGCGCCATTGTT 5598 Query 71272 AAGTATGTATCCAAACGTGCAGGTATCGGTATCAATGTTGGCAAAATTCGTGCATTAGGA 71331 || || || | ||||| |||||||||||||||| |||| ||||| || |||| Sbjct 5599 CGTTACGTGTCACAGCGTGCCGGTATCGGTATCAATGGTGGCCGCATTCGCGCCGTAGGC 5658 Query 71332 AGTCCTATACGCAATGGTGAAGCAGTTCATACTGGTTTAATACCATTCTTAAAGCATTTC 71391 || || || |||||||||| || || |||| | || ||||| ||| ||| Sbjct 5659 AGCGAAATTCGTGGTGGTGAAGCACAACACACGGGTTGCCTGCCGTTCTTCAAGATGTTC 5718 Query 71392 CAAACAGCAGTCAAATCTTGCTCTCAGGGAGGCTTACGTGGTGGTGCTGCTACAGCGTTC 71451 || | || || || || ||||| || || ||| | ||||||||||| || || |||| Sbjct 5719 CAGGCTGCGGTGAAGTCCTGCTCGCAAGGCGGCGTGCGTGGTGGTGCGGCAACCTTGTTC 5778 Query 71452 TACCCTATGTGGCATTTAGAAGTTGAAAGCCTTTTAGTATTGAAAAATAACAAAGGTGTT 71511 ||||| |||||||| | ||||| |||| || | || |||| || ||| ||||| Sbjct 5779 TACCCCATGTGGCACCTGGAAGTGGAAACACTGCTGGTTCTGAAGAACAACCGTGGTGTG 5838 Query 71512 GAAGATAACCGTGTACGTCATTTAGACTATGCTGTGCAATTCAATAAGCTT-ATGTACCA 71570 ||||| |||||| | ||||| || ||||| | ||| || |||| |||| ||||||| Sbjct 5839 GAAGAAAACCGTATTCGTCACTTGGACTACGGTGTTCAGATCAA-CCGCTTGCTGTACCA 5897 Query 71571 ACGATTGATTACAGGTGGCAATATTACATTGTTCTCACCTAATGCAGTTGAAGGTTTATA 71630 || |||| | || || |||| || ||||||| || | | || || | || Sbjct 5898 GCGCCTGATCAAGGGCAGCCATATCACGCTGTTCTCGCCGCACGACGTGCCCGGCCTGTA 5957 Query 71631 TGACTCATTCTTTGCCGACCAAGATAAGTTTGA 71663 || | |||||||||||||| || |||| || Sbjct 5958 CGAAGCCTTCTTTGCCGACCAGGACGAGTTCGA 5990 Score = 138 bits (152), Expect = 8e-28 Identities = 524/808 (65%), Gaps = 27/808 (3%) Strand=Plus/Plus Query 72424 AATGCAACAAATGGTATTGAACCACCTCGCGGTTTAATGAGCATTAAAGCAAGT--AAAG 72481 ||||| || ||||||||||| || || || ||| | | | | | ||||| || || | Sbjct 6751 AATGCCACCAATGGTATTGAGCCTCCGCGTGGTCTGGT-ATCCGTCAAGCA-GTCCAAGG 6808 Query 72482 ATGGTATCTTGAAGCAAGTAGTACCTCATATTGGTACAATGGCTAATGAC---TATGAAT 72538 | ||||||||| || || || ||| | ||| | | ||| ||| || || |||| Sbjct 6809 ACGGTATCTTGCGTCAGGTGGTGCCTGA-ATTTGAAAAATA--TAAGGATCAGTACGAAT 6865 Query 72539 TGTTGTGGAATATTCCAAGCAATAATGGCTATATTGAATTAGTTGCAATCATGCAAAAGT 72598 || ||||| | || || |||| | | ||| | | || |||| | ||||| |||| Sbjct 6866 TGCTGTGGCAAATGCCCGGCAACGACGACTACCTGAAGTTGGTTGGCGTGATGCAGAAGT 6925 Query 72599 TTGTCGATCAGGCAATCTCTGCGAACACAAATTATGACCCTACTAAATTCGCAAATGGCA 72658 | || || ||| | |||||||||||||| || |||||||| |||| ||| Sbjct 6926 TCGTTGACCAGTCGATCTCTGCGAACACCAACTATGACCCACAGCGGTTCGAGGGTGGTC 6985 Query 72659 AAGTCCCAGTTAAGCAAATTCTTAAAGATTTAATACGAGGCTATAAGCTTGGTGTTAAAA 72718 || || | |||||| | || || || | | | | ||| || ||||| || | Sbjct 6986 GCGTACCGATGAAGCAACTGCTCAAGGACCTGCTGCTGGCCTACAAATACGGTGTGAAGA 7045 Query 72719 CATTCTATTACCATAACACCCGTGATGGTGCCAGTGAAG-GTATAG--AAGAAGAAGATG 72775 | || || ||||| |||||||| || |||||| ||| | || | ||| ||| || | Sbjct 7046 CCTTGTACTACCACAACACCCGCGACGGTGCCGATGATTCGCATGGCGAAGTAGAGGACG 7105 Query 72776 AAAGCTGTGGTGGTGGGGCATGTAAAATCTAA-CAACTCAAAGGAGTTTAATATGACAGA 72834 | | || | || || || || || |||||| ||| || ||| | || ||| Sbjct 7106 ACGGTTGCGCAGGCGGCGCGTGCAAGATCTAAGCAAGGGTAAAGAGCATCAT--GACT-- 7161 Query 72835 ACGGTATACAACTTTCGATAAACGACCTAACAATGTATTAGAAGAAGATATGTTCTTAGG 72894 || |||| ||||| |||| |||| | | ||||| |||||||| || Sbjct 7162 ACC-TATAGTACTTTTTCTAAAACGGATAACGACCAGCTCAAAGAACCCATGTTCTTTGG 7220 Query 72895 TCAACATGTAAACGTATCTCGGTACGACCAACAAAAGCTTAGTGCATTTGAAAAATTAAT 72954 || | || ||||| |||| |||||||| ||||| | |||||||| | || Sbjct 7221 GCAGCCGGTTAACGTGGCTCGCTACGACCAGCAAAAATATCCGATTTTTGAAAAGCTGAT 7280 Query 72955 AGAAAAACAATTGAGCTTCTTTTGGCGACCTGATGAAATAGATGTATCAAAAGACCGTTC 73014 ||||| || ||| |||||| ||||| || || ||| | || | | | ||||| Sbjct 7281 TGAAAAGCAGTTGTCCTTCTTCTGGCGTCCGGAGGAAGTGGACATTACCCAGGACCGGAT 7340 Query 73015 TGATTGGCAAAAAATGACTGACTCTGAAAAGCATATTTTCATATCAAATCTTAAATACCA 73074 || | || || || ||||| |||||||| |||||||| ||||| || || || Sbjct 7341 CGACTATCAGAACCTGCCTGACCACGAAAAGCACATTTTCATCAGCAATCTGAAGTATCA 7400 Query 73075 AACATTGCTTGATAGCAT----GGCTGCACGTTCTGTTAATATGGTATTACTTCCACTTG 73130 || ||||| ||| ||| ||| ||| | || ||| || || || | | Sbjct 7401 GACCTTGCTGGATTCCATCCAGGGCCGCAGCCCC----AACGTGGCCTTCCTGCCTTTGG 7456 Query 73131 TATCTTTACCTGAAGTTGAAACATGGATTGAAACATGGGCATTTAGTGAAACTATTCACT 73190 |||| | || || | ||||| ||||||||||| ||||| || || || ||||||| Sbjct 7457 TATCGATTCCGGAGCTGGAAACCTGGATTGAAACCTGGGCTTTCTCCGAGACGATTCACT 7516 Query 73191 CTCGCTCATATACTCATATCTTGCGTAA 73218 | ||||| || || || ||| | || || Sbjct 7517 CGCGCTCGTACACGCACATCATTCGCAA 7544 Score = 82.4 bits (90), Expect = 5e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 73445 GAAGCTATCCGCTTTTACGTAAGTTTCGCATGTTCATTTGCTTTTGCAGAACGTGAGCTA 73504 || || |||||||||||||| || || || || || || || ||||| || || |||| Sbjct 7771 GAGGCCATCCGCTTTTACGTCAGCTTTGCCTGCTCCTTCGCCTTTGCCGAGCGCAAGCTG 7830 Query 73505 CTTGAAGGTAATGCCAAGATTATTAAACTAATCGCCCGTGATGAAGCCTTGCACTTAACT 73564 | ||||| ||||||||||| ||| | || || ||||||||||| |||| | ||| Sbjct 7831 ATGGAAGGCAATGCCAAGATCATTCGCTTGATTGCGCGTGATGAAGCGCTGCATCTGACT 7890 Query 73565 GGTACTCA 73572 || || || Sbjct 7891 GGCACGCA 7898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335639676717670