Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_018088.1
Length=104936
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 179 2e-40
>seq2257
Length=8409
Score = 179 bits (198), Expect = 2e-40
Identities = 349/513 (68%), Gaps = 2/513 (0%)
Strand=Plus/Plus
Query 71152 TCATTACCAACACCTATTATGGGTGGTGTACGTACTCCAACAAGACAATTTAGTAGTTGT 71211
|| || || || || || |||| ||| || || || || || | || || || |||
Sbjct 5479 TCCTTGCCCACGCCCATCATGGCTGGCGTGCGCACACCCACTCGCCAGTTCAGCTCTTGC 5538
Query 71212 GTAAAGATTGACAGTGGCGATAGCCTAGATTCAATTAATGCCTCTTCAAGTTCAATTGTT 71271
|| ||| || ||| ||| ||||| || || |||||| | | || | ||||||
Sbjct 5539 GTGCTGATCGAATGTGACGACAGCCTGGACAGCATCAATGCCACGACCAGCGCCATTGTT 5598
Query 71272 AAGTATGTATCCAAACGTGCAGGTATCGGTATCAATGTTGGCAAAATTCGTGCATTAGGA 71331
|| || || | ||||| |||||||||||||||| |||| ||||| || ||||
Sbjct 5599 CGTTACGTGTCACAGCGTGCCGGTATCGGTATCAATGGTGGCCGCATTCGCGCCGTAGGC 5658
Query 71332 AGTCCTATACGCAATGGTGAAGCAGTTCATACTGGTTTAATACCATTCTTAAAGCATTTC 71391
|| || || |||||||||| || || |||| | || ||||| ||| |||
Sbjct 5659 AGCGAAATTCGTGGTGGTGAAGCACAACACACGGGTTGCCTGCCGTTCTTCAAGATGTTC 5718
Query 71392 CAAACAGCAGTCAAATCTTGCTCTCAGGGAGGCTTACGTGGTGGTGCTGCTACAGCGTTC 71451
|| | || || || || ||||| || || ||| | ||||||||||| || || ||||
Sbjct 5719 CAGGCTGCGGTGAAGTCCTGCTCGCAAGGCGGCGTGCGTGGTGGTGCGGCAACCTTGTTC 5778
Query 71452 TACCCTATGTGGCATTTAGAAGTTGAAAGCCTTTTAGTATTGAAAAATAACAAAGGTGTT 71511
||||| |||||||| | ||||| |||| || | || |||| || ||| |||||
Sbjct 5779 TACCCCATGTGGCACCTGGAAGTGGAAACACTGCTGGTTCTGAAGAACAACCGTGGTGTG 5838
Query 71512 GAAGATAACCGTGTACGTCATTTAGACTATGCTGTGCAATTCAATAAGCTT-ATGTACCA 71570
||||| |||||| | ||||| || ||||| | ||| || |||| |||| |||||||
Sbjct 5839 GAAGAAAACCGTATTCGTCACTTGGACTACGGTGTTCAGATCAA-CCGCTTGCTGTACCA 5897
Query 71571 ACGATTGATTACAGGTGGCAATATTACATTGTTCTCACCTAATGCAGTTGAAGGTTTATA 71630
|| |||| | || || |||| || ||||||| || | | || || | ||
Sbjct 5898 GCGCCTGATCAAGGGCAGCCATATCACGCTGTTCTCGCCGCACGACGTGCCCGGCCTGTA 5957
Query 71631 TGACTCATTCTTTGCCGACCAAGATAAGTTTGA 71663
|| | |||||||||||||| || |||| ||
Sbjct 5958 CGAAGCCTTCTTTGCCGACCAGGACGAGTTCGA 5990
Score = 138 bits (152), Expect = 8e-28
Identities = 524/808 (65%), Gaps = 27/808 (3%)
Strand=Plus/Plus
Query 72424 AATGCAACAAATGGTATTGAACCACCTCGCGGTTTAATGAGCATTAAAGCAAGT--AAAG 72481
||||| || ||||||||||| || || || ||| | | | | | ||||| || || |
Sbjct 6751 AATGCCACCAATGGTATTGAGCCTCCGCGTGGTCTGGT-ATCCGTCAAGCA-GTCCAAGG 6808
Query 72482 ATGGTATCTTGAAGCAAGTAGTACCTCATATTGGTACAATGGCTAATGAC---TATGAAT 72538
| ||||||||| || || || ||| | ||| | | ||| ||| || || ||||
Sbjct 6809 ACGGTATCTTGCGTCAGGTGGTGCCTGA-ATTTGAAAAATA--TAAGGATCAGTACGAAT 6865
Query 72539 TGTTGTGGAATATTCCAAGCAATAATGGCTATATTGAATTAGTTGCAATCATGCAAAAGT 72598
|| ||||| | || || |||| | | ||| | | || |||| | ||||| ||||
Sbjct 6866 TGCTGTGGCAAATGCCCGGCAACGACGACTACCTGAAGTTGGTTGGCGTGATGCAGAAGT 6925
Query 72599 TTGTCGATCAGGCAATCTCTGCGAACACAAATTATGACCCTACTAAATTCGCAAATGGCA 72658
| || || ||| | |||||||||||||| || |||||||| |||| |||
Sbjct 6926 TCGTTGACCAGTCGATCTCTGCGAACACCAACTATGACCCACAGCGGTTCGAGGGTGGTC 6985
Query 72659 AAGTCCCAGTTAAGCAAATTCTTAAAGATTTAATACGAGGCTATAAGCTTGGTGTTAAAA 72718
|| || | |||||| | || || || | | | | ||| || ||||| || |
Sbjct 6986 GCGTACCGATGAAGCAACTGCTCAAGGACCTGCTGCTGGCCTACAAATACGGTGTGAAGA 7045
Query 72719 CATTCTATTACCATAACACCCGTGATGGTGCCAGTGAAG-GTATAG--AAGAAGAAGATG 72775
| || || ||||| |||||||| || |||||| ||| | || | ||| ||| || |
Sbjct 7046 CCTTGTACTACCACAACACCCGCGACGGTGCCGATGATTCGCATGGCGAAGTAGAGGACG 7105
Query 72776 AAAGCTGTGGTGGTGGGGCATGTAAAATCTAA-CAACTCAAAGGAGTTTAATATGACAGA 72834
| | || | || || || || || |||||| ||| || ||| | || |||
Sbjct 7106 ACGGTTGCGCAGGCGGCGCGTGCAAGATCTAAGCAAGGGTAAAGAGCATCAT--GACT-- 7161
Query 72835 ACGGTATACAACTTTCGATAAACGACCTAACAATGTATTAGAAGAAGATATGTTCTTAGG 72894
|| |||| ||||| |||| |||| | | ||||| |||||||| ||
Sbjct 7162 ACC-TATAGTACTTTTTCTAAAACGGATAACGACCAGCTCAAAGAACCCATGTTCTTTGG 7220
Query 72895 TCAACATGTAAACGTATCTCGGTACGACCAACAAAAGCTTAGTGCATTTGAAAAATTAAT 72954
|| | || ||||| |||| |||||||| ||||| | |||||||| | ||
Sbjct 7221 GCAGCCGGTTAACGTGGCTCGCTACGACCAGCAAAAATATCCGATTTTTGAAAAGCTGAT 7280
Query 72955 AGAAAAACAATTGAGCTTCTTTTGGCGACCTGATGAAATAGATGTATCAAAAGACCGTTC 73014
||||| || ||| |||||| ||||| || || ||| | || | | | |||||
Sbjct 7281 TGAAAAGCAGTTGTCCTTCTTCTGGCGTCCGGAGGAAGTGGACATTACCCAGGACCGGAT 7340
Query 73015 TGATTGGCAAAAAATGACTGACTCTGAAAAGCATATTTTCATATCAAATCTTAAATACCA 73074
|| | || || || ||||| |||||||| |||||||| ||||| || || ||
Sbjct 7341 CGACTATCAGAACCTGCCTGACCACGAAAAGCACATTTTCATCAGCAATCTGAAGTATCA 7400
Query 73075 AACATTGCTTGATAGCAT----GGCTGCACGTTCTGTTAATATGGTATTACTTCCACTTG 73130
|| ||||| ||| ||| ||| ||| | || ||| || || || | |
Sbjct 7401 GACCTTGCTGGATTCCATCCAGGGCCGCAGCCCC----AACGTGGCCTTCCTGCCTTTGG 7456
Query 73131 TATCTTTACCTGAAGTTGAAACATGGATTGAAACATGGGCATTTAGTGAAACTATTCACT 73190
|||| | || || | ||||| ||||||||||| ||||| || || || |||||||
Sbjct 7457 TATCGATTCCGGAGCTGGAAACCTGGATTGAAACCTGGGCTTTCTCCGAGACGATTCACT 7516
Query 73191 CTCGCTCATATACTCATATCTTGCGTAA 73218
| ||||| || || || ||| | || ||
Sbjct 7517 CGCGCTCGTACACGCACATCATTCGCAA 7544
Score = 82.4 bits (90), Expect = 5e-11
Identities = 95/128 (74%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 73445 GAAGCTATCCGCTTTTACGTAAGTTTCGCATGTTCATTTGCTTTTGCAGAACGTGAGCTA 73504
|| || |||||||||||||| || || || || || || || ||||| || || ||||
Sbjct 7771 GAGGCCATCCGCTTTTACGTCAGCTTTGCCTGCTCCTTCGCCTTTGCCGAGCGCAAGCTG 7830
Query 73505 CTTGAAGGTAATGCCAAGATTATTAAACTAATCGCCCGTGATGAAGCCTTGCACTTAACT 73564
| ||||| ||||||||||| ||| | || || ||||||||||| |||| | |||
Sbjct 7831 ATGGAAGGCAATGCCAAGATCATTCGCTTGATTGCGCGTGATGAAGCGCTGCATCTGACT 7890
Query 73565 GGTACTCA 73572
|| || ||
Sbjct 7891 GGCACGCA 7898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 335639676717670
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |