Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_018452.1
Length=61847
Score E
Sequences producing significant alignments: (Bits) Value
seq5432 118 4e-22
>seq5432
Length=1936
Score = 118 bits (130), Expect = 4e-22
Identities = 206/299 (69%), Gaps = 3/299 (1%)
Strand=Plus/Minus
Query 9973 GTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCGCTACCTCCCG 10032
|| ||||||||||| | ||||||| | |||| ||||| ||| ||| |||| ||
Sbjct 481 GTTAACAAAGTCATTTTGGTCGGCACTTGCGGCCAGGACCCTGAAGTTCGCCACCTGCCC 422
Query 10033 AGCGGCGACGCAATCTCCAACATCCGCCTCGCTACGACCGATCGCTACAAGGACAAGGCG 10092
| |||| |||| | ||||| || |||| || || | ||| | | | |||||| |
Sbjct 421 AACGGCAACGCGGTGACCAACCTCAGCCTGGCCACCAGCGAGCAGTGGACCGACAAGCAG 362
Query 10093 AGCGGCGAGATGAAGGAATCGACCGAATGGCACCGCGTCAGCTTCTTCGGCCGCCTCGCC 10152
| |||| ||| | || ||||| |||||||| || | |||||| | |||
Sbjct 361 ACCGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTTTCGATGTTCGGCAAGGTTGCC 302
Query 10153 GAGATCGTCGACGAGTACCTGCGCAAGGGCGCGCCGGTCTACATCGAGGGCCGCATCCGC 10212
||||| | || |||||||||||||||||| ||| ||| |||||||||||| | |
Sbjct 301 GAGATTGCCGGCGAGTACCTGCGCAAGGGTTCGCAGGTGTACATCGAGGGCAAGCTGCAG 242
Query 10213 ACGCGGAAGTGGCAGGATAACGCCGGCCAGGATCGCTACACGACCGAGATCGTCGCCGA 10271
|| || |||| ||| || | |||| | || ||||| ||||||||| ||| |||
Sbjct 241 ACCCGCGAGTG---GGAAAAGGACGGCATCAAGCGTTACACCACCGAGATCATCGTCGA 186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 197771160947580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |