Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq5063 129 5e-25
seq2066 122 7e-23
seq4834 100 2e-16
seq471 91.5 1e-13
>seq5063
Length=4177
Score = 129 bits (142), Expect = 5e-25
Identities = 158/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| | || |||||||| || || || || ||||| |||| | ||| | | |
Sbjct 2222 ACGAAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCC 2281
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
||| || | |||||| || || || ||||| ||||||||||| || ||||| ||||||||
Sbjct 2282 ATCCTCGAGTTGCTTTCCGGCGAAGATCAAGCGCTGTTGATCTGGGGGAATTCCTTCTTT 2341
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
|| || || || || || | || | ||||| || | ||| ||||| || ||||
Sbjct 2342 GTCCTGGATCTTGGCCTTGACGTTCTCGATCGTGTCGGAGGCTTCGACTTCGAGGGTGAT 2401
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||| |||||||| | ||| || ||||| || |||||
Sbjct 2402 CGTCTTGCCGGTGAGAGTCTTCACAAAGATTTGCAT 2437
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
||||| || ||||| || || || ||||| || | | || | | |||| || | ||||
Sbjct 2611 TGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCCTCGAGTTGC 2670
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || || || ||||||||||||||||| || ||||| ||||| || || || || ||
Sbjct 2671 TTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGAATTCCTTCCTTGTCCTGGATCTTG 2730
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| || | || | ||||| || | ||| ||||| || |||| ||| ||||||||
Sbjct 2731 GCCTTGACGTTCTCGATGGTGTCGGAGGCTTCGACTTCGAGGGTGATCGTCTTGCCGGTC 2790
Query 101447 AAAGTTTTTACAAATATCTGCATG 101470
| || || || || || ||||||
Sbjct 2791 AGGGTCTTCACGAAGATTTGCATG 2814
Score = 96.9 bits (106), Expect = 3e-15
Identities = 137/193 (71%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 101240 TTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCG 101299
||||| || | | ||| | ||| | ||||| || || || || || || ||||| |||
Sbjct 1665 TTTCCACCGCGGAGACGGAGAACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCG 1724
Query 101300 GCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGC 101359
| || ||| | | || || | ||||| || ||||| |||| ||||| ||||||||
Sbjct 1725 GAGAGAGTGCGCCCGTCTTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCGGGT 1784
Query 101360 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCC 101419
|| || || || || || ||||| || || ||| |||| | ||||| || | |||
Sbjct 1785 GGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTTTCAATGGTGTCCGAGGCTTCG 1844
Query 101420 ACTTCAAGAGTGA 101432
|||||||||||||
Sbjct 1845 ACTTCAAGAGTGA 1857
>seq2066
Length=2850
Score = 122 bits (134), Expect = 7e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319
||| || || ||||| || || || || || ||||| || | | ||| | | |||| ||
Sbjct 1 AACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTC 60
Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379
| |||||| || || || || | ||||||||||| || ||||||||||| || |||||
Sbjct 61 GAGTTGCTTTCCGGCGAAGATGAGGCGCTGTTGATCTGGGGGAATGCCTTCCTTGTCTTG 120
Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439
||| || || ||| | || | |||||||| | ||| ||||| ||||| | ||| ||
Sbjct 121 AATCTTCGCCTTGACATTCTCAATGGTGTCAGAAGCTTCGACTTCGAGAGTTATCGTCTT 180
Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||| || || || || || || || |||||
Sbjct 181 GCCAGTCAAGGTCTTCACGAAGATTTGCAT 210
Score = 118 bits (130), Expect = 8e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
|||| || | | ||| | ||| || || ||||| || || || || || ||||| || |
Sbjct 1926 TTCCACCACGGAGACGGAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCG 1985
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
| || | | |||| || | |||||| || || || ||||||||||||||||| || |
Sbjct 1986 ACAGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGG 2045
Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420
|||| ||||| || || || || || || || | || | ||||| || | ||| |
Sbjct 2046 GAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCCGAGGCTTCGA 2105
Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
|||| || |||| ||| ||||| || || || || || || |||||||||
Sbjct 2106 CTTCGAGGGTGATCGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCATG 2155
Score = 107 bits (118), Expect = 2e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
||||| || ||||| ||||| || ||||| || | | || | | |||| || | |||
Sbjct 1457 TGAAGAGTCGATTCCTTTTGGATGTTGTAGTCCGACAATGTGCGGCCATCCTCGAGCTGC 1516
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || || || || | ||||||||||| || ||||||||||| || || || || ||
Sbjct 1517 TTTCCGGCGAAGATGAGGCGCTGTTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTG 1576
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| || | || | ||||| || | ||| ||||| || |||| ||| ||||| ||
Sbjct 1577 GCCTTGACGTTCTCGATGGTGTCCGAGGCTTCGACTTCGAGGGTGATCGTCTTGCCCGTC 1636
Query 101447 AAAGTTTTTACAAATATCTGCATG 101470
|| || || || || |||||||||
Sbjct 1637 AAGGTCTTCACGAAGATCTGCATG 1660
Score = 82.4 bits (90), Expect = 6e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 101325 GCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTT 101384
||||||| ||||| |||| ||||| ||||||||||| || || || || || || || |
Sbjct 2284 GCTTACCGGCAAAGATCAGGCGCTGCTGATCGGGCGGGATTCCCTCCTTGTCCTGGATCT 2343
Query 101385 TTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGG 101444
| || ||| | || | ||||| || | || || ||||| |||| || || ||||
Sbjct 2344 TGGCCTTCACATTGTCGATGGTGTCGGAAGCCTCGACCTCAAGGGTGATGGTCTTCCCGG 2403
Query 101445 TTAAAGTTTTTACAAATATCTGCATGGTTACGCGA 101479
| | || || || || || ||||||||| || ||
Sbjct 2404 TGAGGGTCTTCACGAAGATTTGCATGGTTTCGAGA 2438
>seq4834
Length=88581
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || || || ||||| || || || || ||||| || | | ||| | | | || ||
Sbjct 21131 ACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCTGAAAGAGTACGGCCGTCCTCA 21190
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| || || || ||||| || | |||||||| ||||| || |||||||| |||||||||
Sbjct 21191 AGCTGTTTTCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGGGATGCCTTCCTTATCTTGA 21250
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || || | || | ||||| || | ||| ||||| || |||| || ||
Sbjct 21251 ATCTTCGCCTTCACGTTCTCGATTGTGTCCGAAGCTTCGACTTCGAGGGTGATGGTCTTT 21310
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATG 101470
||||| | || || ||||| || ||||||
Sbjct 21311 CCGGTGAGCGTCTTGACAAAGATTTGCATG 21340
Score = 89.7 bits (98), Expect = 4e-13
Identities = 150/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| || || || || || || || || || ||||| |||| | || | | |
Sbjct 22329 ACGGAGAACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGATAACGTGCGGCC 22388
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
|| || | ||||| || || || || | || || || || || || |||||||| ||
Sbjct 22389 GTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGTTGCTGGTCCGGAGGGATGCCTTCCTT 22448
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
||||||||| || || || | || | ||| || || | ||| |||||||| ||||
Sbjct 22449 ATCTTGAATCTTCGCCTTCACGTTCTCGATAGTATCCGAGGCTTCGACTTCAAGGGTGAT 22508
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
|| || ||||| | || || || || |||||||||
Sbjct 22509 TGTCTTCCCGGTAAGCGTCTTCACGAAGATCTGCATG 22545
Score = 86.0 bits (94), Expect = 5e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| ||||| || ||||| || || || || ||||| |||| | ||||||| |||| ||
Sbjct 21723 ACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAAAGTTCTGCCATCTTCA 21782
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| ||||| || || || || | ||||| || || || || |||||||| |||||||||
Sbjct 21783 AGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCAGGAGGGATGCCTTCCTTATCTTGA 21842
Query 101381 AT 101382
||
Sbjct 21843 AT 21844
>seq471
Length=2147
Score = 91.5 bits (100), Expect = 1e-13
Identities = 107/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 101325 GCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTT 101384
||||||| ||||| |||| ||||||||||| || || || || || ||||| || ||||
Sbjct 1948 GCTTACCGGCAAAGATCAGGCGCTGTTGATCAGGTGGGATTCCCTCCTTATCCTGGATTT 2007
Query 101385 TTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGG 101444
| || ||| |||| | || || || | ||| ||||||||||||| || || || |
Sbjct 2008 TGGCCTTCACATTTTCGATGGTATCCGAAGCTTCGACTTCAAGAGTGATGGTCTTTCCTG 2067
Query 101445 TTAAAGTTTTTACAAATATCTGCAT 101469
| | || || || || ||||||||
Sbjct 2068 TGAGCGTCTTGACGAAGATCTGCAT 2092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396242129381070
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