Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_019445.1
Length=44784
Score E
Sequences producing significant alignments: (Bits) Value
seq1697 89.7 1e-13
>seq1697
Length=1197
Score = 89.7 bits (98), Expect = 1e-13
Identities = 155/224 (69%), Gaps = 6/224 (3%)
Strand=Plus/Plus
Query 193 TGCTTACCGATACAAAATTAAAAAACCTCAAGCCGCAGGACAAACTGTACAAGGTCTCCG 252
|||||||||| || | | ||||||||||| || ||| | || |||| || |
Sbjct 86 TGCTTACCGACACCGCACTGCGGAACCTCAAGCCTAAGTCCAAGATTTATAAGGCTTCTG 145
Query 253 ATCGTGACGGGCTGTATGTAGCTGTGCTTACGTCA---GGCACGGTCTCGTTTCGCTATG 309
|||| |||||| |||| ||| | | | ||||| || || ||| | || ||||| |
Sbjct 146 ATCGCGACGGGGTGTACGTAAC---GGTATCGTCAAGCGGTACCGTCACCTTCCGCTACG 202
Query 310 ACTACCGTATCAACGGTCGCCGCGAAACACTGGTAATCGGGCAGTATGGGCGTGACGGTA 369
|||||||| ||||||| || |||||||| ||| ||||| ||| || | || |||||
Sbjct 203 ACTACCGTCTCAACGGACGTCGCGAAACTCTGACGATCGGCAGGTACGGACCTGCCGGTA 262
Query 370 TCAGCCTGGCAGAAGCGCGAGAAGAACTGATTGCTGCAAAGAAG 413
| ||||| || || ||| | ||||||| || || |||
Sbjct 263 TTTCTCTGGCGTTGGCTCGCGAAAAGCTGATTGACGCCAAAAAG 306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 143174430386520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |