Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq7237 248 2e-60
seq2592 212 1e-49
>seq7237
Length=102105
Score = 248 bits (274), Expect = 2e-60
Identities = 641/969 (66%), Gaps = 22/969 (2%)
Strand=Plus/Plus
Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755
||| |||||||| ||| || ||||| | | | ||| |||||||| || ||||| ||
Sbjct 84523 GTTGAGGGACTGGGACTGATCGATGAAGGCTCCTCGGTCCGCGGCCATCTCGATGATGTC 84582
Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815
|||| |||| |||||| ||||||||| ||| || | || |||| ||||
Sbjct 84583 CTTCTGCGAGATCTCCCAAACGGTCTTGTAGAGGTCCTGCAGCTCCTTGGGGATCGAATC 84642
Query 212816 GATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCGCATGTCCTCGTTCCAGAG 212875
||||||||| | || || || ||| | | || || | |||| ||| ||
Sbjct 84643 GATGTTCTGGATCGATCCACTCTGTGAAATTATCTTGTTCTTCAGATTGTCGTCCCATAG 84702
Query 212876 GCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAG 212935
| | | | ||| ||| | || ||||| || || ||||||||||| || |||||
Sbjct 84703 GTTTCGCTCCACGAGGTCCTTCAGTAGATGAGGATTCACGATCTGGAAGTCGCCAGAGAG 84762
Query 212936 CACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAAT 212995
||| | | ||| | ||| || ||||| ||||| || ||||||||| || || ||
Sbjct 84763 CACGCGGCGACTGTAGATGTTCGACGTGTACGGCTCCATCGACTCGTTGTTTCCTAGGAT 84822
Query 212996 CTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTC 213055
||| || || || || |||||||| ||||||||||||||||||| || |||||||
Sbjct 84823 CTGCGCTGTCGATGCCGTTGGCATGGGCGCCACCAGGAGACTGTTCCGTACGCCGTGCTT 84882
Query 213056 GCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCA--------TCTGCCAGACAGG---TCC 213104
|||| | || | ||||||||||| | || ||| || |||
Sbjct 84883 CGCGATCTTCTCCTTGAGTGCGGCCCAGTCCCACTGGTCGGTGGGCACGACCGGCTTTCC 84942
Query 213105 -TCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTG 213163
|| || || |||||||| || |||||| ||| |||| |||||| || || |
Sbjct 84943 ATCCTCGGTC---TTCCACATCTCGTACTGCAGGATTCCTTGGCTCACTGGCGATCCTTC 84999
Query 213164 GTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTA 213223
|| | ||||| || |||| || ||||||||||| || || | |||||| ||||
Sbjct 85000 ATAGGTCTCGTAGGTACCGTGCTGCTCCGCCAGCTCGCAAGAGGCTTCCAGGGCCGCGTG 85059
Query 213224 GTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGAC--GTGAAGGGC 213281
||||||||| || || ||| | ||| | || ||| || ||||| ||||||||
Sbjct 85060 GTAGATGGTCTCGAAGATCCTTCGGTTCATGTTGCGGGCTTC--GGGACTGGTGAAGGGG 85117
Query 213282 ATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGT 213341
|||| | ||| | || |||| |||||||| ||||| || || || | ||
Sbjct 85118 TAGCGCATGAGCATGAAGGCGTCCGCCAAGCCCTGGACTCCGATTCCAATCGGCCGATGC 85177
Query 213342 CTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTG 213401
||| ||| || | | ||| || ||||| |||| |||||||||||||||
Sbjct 85178 CTCTTGTTGGAGGTCTCGGCCTCGGGCACAGGGTAGTAGTTCGCGTCGATGATCTTGTTC 85237
Query 213402 AGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCC 213461
||||| | ||| || || |||| | | || | | ||| | | || | || |
Sbjct 85238 AGGTTCCTCGTGATGACCTTCGTGATCTCGTGGAGCTTCGCGT-AGTCAA-AAGTCTTCT 85295
Query 213462 CCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGA 213521
|| || || || |||||||| | |||||||||||| ||||| || || | |
Sbjct 85296 CC-TCGGTGACGAAGCGGTTCAGGGCGACGGAGGCCAGGTTGCACACGGCTACTTCTTCA 85354
Query 213522 GAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTC 213581
| | ||||| | |||||||||||| |||||| ||| ||| || || ||||||
Sbjct 85355 GGCGAAGAGTACTGGACGATCTCGGTGCAGAGGTTGGAGCACTTGATCGTCCCGAGGTTC 85414
Query 213582 TGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCT 213641
| ||||| ||||| |||| | ||||||||||||||||| || | ||||| ||
Sbjct 85415 TTCTGGTTGGACTTCTGGTTGCAGGCGTCCTTGTAGAGCATGTAAGGAGTGCCGGTTTCG 85474
Query 213642 AGCTGGGAC 213650
| ||| |||
Sbjct 85475 ATCTGCGAC 85483
Score = 131 bits (144), Expect = 3e-25
Identities = 288/424 (68%), Gaps = 16/424 (4%)
Strand=Plus/Plus
Query 213994 TGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATAT 214053
||||| ||| ||||| | || | || |||||||| |||||||| || || ||
Sbjct 85922 TGTTGTAGACCCGCAGCATAGGAATGAGTCCGTTGGAGGTGCCGTTGGTCCCAGCGATGA 85981
Query 214054 ACGAGCCGGAGGCCCTCAGGT--TGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGA 214111
| |||||||| | | | || ||| ||| || || || |||||| |||||||
Sbjct 85982 GAGTTCCGGAGGCTCGAATGCAGTGGACATTGAGG--CCGATTCCGCCGGCGGACTTGGA 86039
Query 214112 GATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTT 214171
||||| ||||| ||| | |||| | ||||||| | ||| ||| || | | | |
Sbjct 86040 GATCAGAGCGCACTGCCAGAGGGTCTTGAAGATGCCGTCGATGGAGTCGTCACTCATGGT 86099
Query 214172 CAGCAAGAAGC---AGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGG 214228
|||| ||||| ||||| | ||||||| || | | ||| | |||||| ||||| ||
Sbjct 86100 GAGCAGGAAGCAGGAGCTC---ATCTGGGGCTTGCAGGTGCCGGCGTTGAAGAGCGTCGG 86156
Query 214229 GCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGAT 214288
||||||| | | || | || | ||| ||||||| || | | | | | |||
Sbjct 86157 CGAGGCATGGGTGAACCACCGCTCGGACATGAGGTTGTAGGTTTCGATGGCGGCGTTGAT 86216
Query 214289 GTCGTGCTTGTGGATCTGTAGAGCGCAC-CTCATCAGCATGTGCTGGGGCCTCTCTATGG 214347
||| | ||||||||| | || ||| | ||||||||| || ||||| | || |
Sbjct 86217 GTCTTCCTTGTGGATTCCGACGGC-CACGCGCATCAGCATATGTTGGGGTCGTTCCA--C 86273
Query 214348 GTCCTT--TGGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTAGGA 214405
| |||| | | |||||| ||||||||||||||||| |||||||| || |||||||
Sbjct 86274 GACCTTCCCGTCGATCTTGAGGAGGTAGGAGCGCTCCAGGGTCTTGAAGCCGAAGTAGGT 86333
Query 214406 GTAG 214409
||||
Sbjct 86334 GTAG 86337
Score = 102 bits (112), Expect = 2e-16
Identities = 130/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 213780 GGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACC 213839
|||||||||||| ||| ||| ||| || |||| | || |||||||| ||| |||| |
Sbjct 85659 GGACACATGAGGGACCACTCCTTGTCGTCCTTGACACGCTCCATGAACAAGTCGGGGATC 85718
Query 213840 CACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGA 213899
|| ||| || ||| || || | | | | ||| ||| ||| | ||| | ||||
Sbjct 85719 CAGAGCCCGTAGAAGAGATCGCGAGCGCGCTCCTCCTCCGATCCGGTGTTCCTCTTCAGA 85778
Query 213900 TCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGG 213958
|| || || ||||||||||||||||| ||||| ||||||||||| ||||| || ||
Sbjct 85779 CGCAGGAACTCGAAGATGTCCGCGTGCCATGGCTCGATGTAGATGGCGAAGGCTCCAGG 85837
>seq2592
Length=18905
Score = 212 bits (234), Expect = 1e-49
Identities = 301/423 (71%), Gaps = 3/423 (1%)
Strand=Plus/Plus
Query 47954 AGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013
|| ||||| || || |||||||| ||||| | ||||| ||| | ||||||||| ||
Sbjct 14874 AGTAGGTGGTCGGCCACGTACTCTATGTACTGGGACATTAGGCGGCAGTTCATGCCGATC 14933
Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073
| | |||||| | || | ||| || |||||| ||| ||||| ||||| || | |
Sbjct 14934 ATGTCCACGGGTAGGGCTTCTGTCAGGTACTCCTGCTCGATCTGGACGGCCTCGCGGATG 14993
Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133
|||| || || | || ||| ||| | ||||| |||| || | | ||||
Sbjct 14994 ATCTCGTTGACCTGCTTCTGGCTGGGCTTGCTCTCCAGGTACTTG---TACATGAGGCAG 15050
Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193
|| ||||| | ||| | ||||||||||||| |||||| ||||| | | ||| ||
Sbjct 15051 GCGAAGTCGCGGTGGAGGCCTTCGTCCCGGGAGATGAGTTCGTTGCTGTGGGTGAGGCCG 15110
Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253
||||| | || | || ||||||||||| || || ||||| || || ||||||||||||
Sbjct 15111 GGCATCAGGCCGCGCTTCTTGAGCCAGAAGATGGCGGCGAAGGATCCGGAGAAGAAGATG 15170
Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313
|| ||||| || ||||| ||| | | | |||||| || ||||||||||| ||||
Sbjct 15171 CCTTCCACGGCGGCGAAGGCGATCACGCGGGTTCCGAAGGAGGCGTTCTTGTCGCCGATC 15230
Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373
||| || |||||||| ||||||||||||||||| || | | | |||||| ||||
Sbjct 15231 CAGCGCAGTGCCCAGTCGGCCTTCTTCTTGATGCACGGGAACTCTTGTATGGCGTTGAAG 15290
Query 48374 AGC 48376
|||
Sbjct 15291 AGC 15293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931445352358400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |