Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq7237 183 6e-41 seq2592 100 5e-16 >seq7237 Length=102105 Score = 183 bits (202), Expect = 6e-41 Identities = 345/502 (69%), Gaps = 19/502 (4%) Strand=Plus/Plus Query 221366 CCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTC-AGGGC 221424 || || || | |||||||| ||||| | | || ||| | ||||||| || || ||||| Sbjct 84995 CCTTCATAGGTCTCGTAGGTACCGTGCTGCTCCGCCAGCTCGCAAGAG-GCTTCCAGGGC 85053 Query 221425 AGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAA 221484 ||||||||||||||||| |||||| | ||| | | ||| |||||| ||||| Sbjct 85054 CGCGTGGTAGATGGTCTCGAAGATCCTTCGGTTCATGTTGCGGGCTTCGGGACTGGTGAA 85113 Query 221485 GGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCT 221544 ||| |||| | | ||| |||| |||| ||||| |||||||| || || |||| Sbjct 85114 GGGGTAGCGCATGAGCATGAAGGCGTCCGCCAAGCCCTGGACTCCGATTCCAATCGGCCG 85173 Query 221545 GTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATT 221604 || ||| ||||||| | | || || ||||| || || |||| ||||||| | || Sbjct 85174 ATGCCTCTTGTTGGAGGTCTCGGCCTCGGGCACAGGGTAGTAGTTCGCGTCGATGATCTT 85233 Query 221605 GTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAA 221664 ||| |||||| |||||||| || | |||| |||||| || | | || || Sbjct 85234 GTTCAGGTTCCTCGTGATGACCTTCGTGATCTCGTGGAGCTTCGCGT-AGTCAA----AA 85288 Query 221665 CTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGC-GTTTAGGGCAACGCTGGCCAGGTTAC 221723 || | || ||| || | |||| ||| ||||| ||| ||||||||| | Sbjct 85289 GTCTTCTCC-TCGGTGACG----------AAGCGGTTCAGGGCGACGGAGGCCAGGTTGC 85337 Query 221724 ACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACT 221783 ||||||| || || || | ||||| | |||||| || ||||||||| ||||| Sbjct 85338 ACACGGCTACTTCTTCAGGCGAAGAGTACTGGACGATCTCGGTGCAGAGGTTGGAGCACT 85397 Query 221784 TGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAA 221843 |||| ||||| |||| || || || ||||| | ||| ||||||||||||||||| Sbjct 85398 TGATCGTCCCGAGGTTCTTCTGGTTGGACTTCTGGTTGCAGGCGTCCTTGTAGAGCATGT 85457 Query 221844 AGGGACCGCCAGTCTCCAGCTG 221865 | ||| ||| || || | ||| Sbjct 85458 AAGGAGTGCCGGTTTCGATCTG 85479 >seq2592 Length=18905 Score = 100 bits (110), Expect = 5e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 25814 GCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTG 25873 ||||||||| |||||| ||||| || |||||| | | ||| ||| | || | Sbjct 15264 GCATCAAGAAGAAGGCCGACTGGGCACTGCGCTGGATCGGCGACAAGAACGCCTCCTTCG 15205 Query 25874 GCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGG 25933 | || || | ||||| || || ||||| |||||||| ||| ||| || || || | Sbjct 15204 GAACCCGCGTGATCGCCTTCGCCGCCGTGGAAGGCATCTTCTTCTCCGGATCCTTCGCCG 15145 Query 25934 CCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCA 25993 ||||||||||||||||| || || |||||||| || | |||||| |||| Sbjct 15144 CCATCTTCTGGCTCAAGAAGCGCGGCCTGATGCCCGGCCTCACCCACAGCAACGAACTCA 15085 Query 25994 TCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 || | ||||||| || |||||| | || || |||||||| | |||| Sbjct 15084 TCTCCCGGGACGAAGGCCTCCACCGCGACTTCGCCTGCCTCATGTACA 15037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928757604694400