Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq7237 183 6e-41
seq2592 100 5e-16
>seq7237
Length=102105
Score = 183 bits (202), Expect = 6e-41
Identities = 345/502 (69%), Gaps = 19/502 (4%)
Strand=Plus/Plus
Query 221366 CCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTC-AGGGC 221424
|| || || | |||||||| ||||| | | || ||| | ||||||| || || |||||
Sbjct 84995 CCTTCATAGGTCTCGTAGGTACCGTGCTGCTCCGCCAGCTCGCAAGAG-GCTTCCAGGGC 85053
Query 221425 AGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAA 221484
||||||||||||||||| |||||| | ||| | | ||| |||||| |||||
Sbjct 85054 CGCGTGGTAGATGGTCTCGAAGATCCTTCGGTTCATGTTGCGGGCTTCGGGACTGGTGAA 85113
Query 221485 GGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCT 221544
||| |||| | | ||| |||| |||| ||||| |||||||| || || ||||
Sbjct 85114 GGGGTAGCGCATGAGCATGAAGGCGTCCGCCAAGCCCTGGACTCCGATTCCAATCGGCCG 85173
Query 221545 GTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATT 221604
|| ||| ||||||| | | || || ||||| || || |||| ||||||| | ||
Sbjct 85174 ATGCCTCTTGTTGGAGGTCTCGGCCTCGGGCACAGGGTAGTAGTTCGCGTCGATGATCTT 85233
Query 221605 GTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAA 221664
||| |||||| |||||||| || | |||| |||||| || | | || ||
Sbjct 85234 GTTCAGGTTCCTCGTGATGACCTTCGTGATCTCGTGGAGCTTCGCGT-AGTCAA----AA 85288
Query 221665 CTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGC-GTTTAGGGCAACGCTGGCCAGGTTAC 221723
|| | || ||| || | |||| ||| ||||| ||| ||||||||| |
Sbjct 85289 GTCTTCTCC-TCGGTGACG----------AAGCGGTTCAGGGCGACGGAGGCCAGGTTGC 85337
Query 221724 ACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACT 221783
||||||| || || || | ||||| | |||||| || ||||||||| |||||
Sbjct 85338 ACACGGCTACTTCTTCAGGCGAAGAGTACTGGACGATCTCGGTGCAGAGGTTGGAGCACT 85397
Query 221784 TGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAA 221843
|||| ||||| |||| || || || ||||| | ||| |||||||||||||||||
Sbjct 85398 TGATCGTCCCGAGGTTCTTCTGGTTGGACTTCTGGTTGCAGGCGTCCTTGTAGAGCATGT 85457
Query 221844 AGGGACCGCCAGTCTCCAGCTG 221865
| ||| ||| || || | |||
Sbjct 85458 AAGGAGTGCCGGTTTCGATCTG 85479
>seq2592
Length=18905
Score = 100 bits (110), Expect = 5e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 25814 GCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTG 25873
||||||||| |||||| ||||| || |||||| | | ||| ||| | || |
Sbjct 15264 GCATCAAGAAGAAGGCCGACTGGGCACTGCGCTGGATCGGCGACAAGAACGCCTCCTTCG 15205
Query 25874 GCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGG 25933
| || || | ||||| || || ||||| |||||||| ||| ||| || || || |
Sbjct 15204 GAACCCGCGTGATCGCCTTCGCCGCCGTGGAAGGCATCTTCTTCTCCGGATCCTTCGCCG 15145
Query 25934 CCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCA 25993
||||||||||||||||| || || |||||||| || | |||||| ||||
Sbjct 15144 CCATCTTCTGGCTCAAGAAGCGCGGCCTGATGCCCGGCCTCACCCACAGCAACGAACTCA 15085
Query 25994 TCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041
|| | ||||||| || |||||| | || || |||||||| | ||||
Sbjct 15084 TCTCCCGGGACGAAGGCCTCCACCGCGACTTCGCCTGCCTCATGTACA 15037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928757604694400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |