Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_019500.1
Length=168066
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 116 4e-21
>seq2257
Length=8409
Score = 116 bits (128), Expect = 4e-21
Identities = 274/412 (67%), Gaps = 4/412 (1%)
Strand=Plus/Plus
Query 94844 AGGTTTCATTACCAACTCCTATTATGGCTGGAGCACGTACACCAACCCGTCAATTTAGTT 94903
|| |||| || || || || || |||||||| | || ||||| || || || || || |
Sbjct 5474 AGATTTCCTTGCCCACGCCCATCATGGCTGGCGTGCGCACACCCACTCGCCAGTTCAGCT 5533
Query 94904 CTTGTGTGGTTATTGAAGCAGGCGACTCACTGAAATCTATTAACAAAACTGCTAACTCAA 94963
|||| ||| | || ||| | |||| ||| | || || || | | | | |
Sbjct 5534 CTTGCGTGCTGATCGAATGTGACGACAGCCTGGACAGCATCAATGCCACGACCAGCGCCA 5593
Query 94964 TAATTGAATACATTTCTAAACGTGCCGGTATTGGTATCAACGTTGGTATGATTCGTGCTG 95023
| || ||| | || | ||||||||||| |||||||| | ||| ||||| || |
Sbjct 5594 TTGTTCGTTACGTGTCACAGCGTGCCGGTATCGGTATCAATGGTGGCCGCATTCGCGCCG 5653
Query 95024 AAGGTTCTCGTATTGGCATGGGCGAAGTCAAGCATACCGGTGTTATTCCATTCTGGAAAC 95083
||| ||| | || |||| | || || ||| | || |||| ||
Sbjct 5654 TAGGCAGCGAAATTCGTGGTGGTGAAGCACAACACACGGGTTGCCTGCCGTTCTTCAAGA 5713
Query 95084 ATTTCCAGACTGCTGTTAAATCATGTTCACAAGGTGGAATCCGTGGCGGCGCTGCTACTG 95143
|||||| |||| || || || || || ||||| || | ||||| || || || ||
Sbjct 5714 TGTTCCAGGCTGCGGTGAAGTCCTGCTCGCAAGGCGGCGTGCGTGGTGGTGCGGCAAC-- 5771
Query 95144 CTTATTAT--CCTATTTGGCATTTGGAAGTTGAAAATCTGCTCGTTCTGAAAAACAACAA 95201
||| || | || || ||||| ||||||| |||| ||||| |||||||| ||||||
Sbjct 5772 CTTGTTCTACCCCATGTGGCACCTGGAAGTGGAAACACTGCTGGTTCTGAAGAACAACCG 5831
Query 95202 AGGTGTCGATGAGAACCGTATTCGCCATATGGACTACGGAATCCAGATGAAC 95253
||||| || || ||||||||||| || |||||||||| | ||||| |||
Sbjct 5832 TGGTGTGGAAGAAAACCGTATTCGTCACTTGGACTACGGTGTTCAGATCAAC 5883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 537632724989600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |