Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq2290 143 8e-30 >seq2290 Length=1989 Score = 143 bits (158), Expect = 8e-30 Identities = 404/615 (66%), Gaps = 14/615 (2%) Strand=Plus/Minus Query 45488 AAAGAAGATCGGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAAC 45547 |||| || || || || || ||||| ||||| || || | || ||||||| | Sbjct 1420 AAAGGTGACCGCACAGGTACCGGCACGAACTCGGTATTTGGTCACCAAATGCGCTTCGAT 1361 Query 45548 TTGCAGGACGGATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTAT 45607 || | | || |||||| | | || || || ||| |||| | |||| ||| || | Sbjct 1360 CTGTCGCAGGGTTTCCCGTTGATCACCACCAAGAAGCTGCACACCCGCAGCATCTTTATT 1301 Query 45608 GAACTGCTCTGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTG 45667 ||| |||| |||||||| || || | ||||| |||| |||| ||| || || Sbjct 1300 GAATTGCTGTGGTTTTTGCGCGGTGAGTCCAATGTGCGCTGGCTGCAAGAGCGCGGCGTA 1241 Query 45668 ACGATTTGGGACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAA 45727 | || ||||| || |||||||| || ||||| |||| ||||| |||| |||| |||| Sbjct 1240 TCCATCTGGGATGAATGGGCCGACGAGGACGGCAATCTGGGCCCGGTCTATGGCGTGCAA 1181 Query 45728 TGGCGGTCGTGGAAAGGGGCTGACGGGAAAACGGTCGACCAAATTGCGGCGGTCTTTAAG 45787 ||||| || ||| | ||||| ||||||| || | | || | | Sbjct 1180 TGGCGCTCCTGGCCGACCCCCGACGGTCGTCACATCGACCAGATCA-GCCAGTTGGT--G 1124 Query 45788 GAAATCAAGCGCAA----CCCGAACTCGCGGCGGTTGCTTGTGAGCGCGTGGAACGTGGC 45843 ||| | ||||| ||||| |||||| || || | || || ||||||||||| Sbjct 1123 GAACAGATTCGCAAGAATCCCGA-CTCGCGTCGCCTGATCGTCTCGGCCTGGAACGTGGC 1065 Query 45844 AAAGTTGGGGGAAATGAAGTTGCCCCCATGTCATTACGCC---TTTCAGTTTTACGTCGC 45900 | |||| | ||| ||||||| || | ||||| || ||||| || || || Sbjct 1064 GGATGTGGGCCAGATGGCTCTGCCCCCTTGCC---ACGCCCTGTTCCAGTTCTATGTAGC 1008 Query 45901 GAATGGCCGGTTGTCATGCATGTGGCAACAGCGTTCTGTCGATACATTTCTAGGATTGCC 45960 ||||| | |||| ||| | | ||||| || |||| || || || |||| Sbjct 1007 CGATGGCAAGCTGTCCTGCCAGCTCTACCAGCGCAGTGCGGATATTTTCCTGGGTGTGCC 948 Query 45961 GTTTAACATCGCTAGCTATGCGCTGTTGACACATATGGTTGCCCAACAATGCGACCTCGA 46020 || || ||||| ||||| || ||| |||| || ||| | ||||| ||||| || || || Sbjct 947 CTTCAATATCGCCAGCTACGCTCTGCTGACCCACATGATGGCCCAGCAATGTGATCTGGA 888 Query 46021 TGTCGGCGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACA 46080 || ||||| |||||| || ||||||||| ||| |||| || || | || || Sbjct 887 AGTGGGCGACTTCATTTGGACGGGCGGCGACTGCCACCTGTATTCCAACCACTTCGAGCA 828 Query 46081 AGCGAAACTGCAGCT 46095 ||| || ||||||| Sbjct 827 AGCCGAATTGCAGCT 813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157736331622140