Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_019910.1
Length=159624
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 134 1e-26
>seq2257
Length=8409
Score = 134 bits (148), Expect = 1e-26
Identities = 351/526 (67%), Gaps = 16/526 (3%)
Strand=Plus/Plus
Query 73416 CCCACCCCGATTATGGCAGGTGTTCGTACTCCTACCCGTCAGTTCAGTTCCTGTGTCCTG 73475
||||| || || ||||| || || || || || || || |||||||| || || || |||
Sbjct 5485 CCCACGCCCATCATGGCTGGCGTGCGCACACCCACTCGCCAGTTCAGCTCTTGCGTGCTG 5544
Query 73476 ATCAAAACTGGTGACACCCTGGACTCTATCAACGCAACGGCCAAGACCATCGTTGACTAT 73535
||| || || |||| ||||||| ||||| || ||| ||| |||| ||| ||
Sbjct 5545 ATCGAATGTGACGACAGCCTGGACAGCATCAATGCCACGACCAGCGCCATTGTTCGTTAC 5604
Query 73536 GTGTCCAAACGCGCAGGTATCGGCTTCGACGTCGGGGCTATCCGTGGGATTGGCAGTCCT 73595
||||| | || || |||||||| || | | || || || | | |||||
Sbjct 5605 GTGTCACAGCGTGCCGGTATCGGTATCAATGGTGGCCGCATTCGCGCCGTAGGCAGCGAA 5664
Query 73596 ATTCGCGGCGGAGAGATGGTTCACACAGG---CCTGATCCCATTCATCAAGTATCTCACT 73652
||||| || || || ||||| || |||| || ||| ||||| || | |
Sbjct 5665 ATTCGTGGTGGTGAAGCACAACACACGGGTTGCCTG---CCGTTCTTCAAG-ATGTTCCA 5720
Query 73653 GGG-GCGCTCAAGTCGTGCTCCCAGGGCGGCATTCGTGGTGGTGCGGCAACAGCGTACAT 73711
|| ||| | ||||| ||||| || |||||| | ||||||||||||||||| || |
Sbjct 5721 GGCTGCGGTGAAGTCCTGCTCGCAAGGCGGCGTGCGTGGTGGTGCGGCAACCTTGTTCTA 5780
Query 73712 CCCTCTGTGGCAT-TACCAGTTCGATGACGTCGTTGTACTGAAGAATAACCGTGGTACTG 73770
||| ||||||| | ||| | || | | || |||||||| ||||||||| |
Sbjct 5781 CCCCATGTGGCACCTGGAAGTGGAAACACTGC-TGGTTCTGAAGAACAACCGTGGTGTGG 5839
Query 73771 AAGAGAACCGCGAACGCCGTATCGACTATGGTATTCAGATCAACCGCGTGATGTTTGAGC 73830
|||| ||||| || | | ||||| ||| |||||||||||||| || ||| |||
Sbjct 5840 AAGAAAACCGTATTCGTCACTTGGACTACGGTGTTCAGATCAACCGCTTGCTGTACCAGC 5899
Query 73831 GCCTGGTTGCCAA--GCAACC-TCTGTATCTGTTCGACCCGAAAGACAACCGCGAAATGT 73887
||||| | ||| ||| || | | |||||| ||| | ||| | || |||
Sbjct 5900 GCCTGAT---CAAGGGCAGCCATATCACGCTGTTCTCGCCGCACGACGTGCCCGGCCTGT 5956
Query 73888 ACGAAGCATACTTCGCTGACGTTGACAAGTTCCGTACTCTGTACGA 73933
||||||| | ||| || ||| ||| ||||| |||||||||
Sbjct 5957 ACGAAGCCTTCTTTGCCGACCAGGACGAGTTCGAGCGTCTGTACGA 6002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 510620860966400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |