Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_019910.1 Length=159624 Score E Sequences producing significant alignments: (Bits) Value seq2257 134 1e-26 >seq2257 Length=8409 Score = 134 bits (148), Expect = 1e-26 Identities = 351/526 (67%), Gaps = 16/526 (3%) Strand=Plus/Plus Query 73416 CCCACCCCGATTATGGCAGGTGTTCGTACTCCTACCCGTCAGTTCAGTTCCTGTGTCCTG 73475 ||||| || || ||||| || || || || || || || |||||||| || || || ||| Sbjct 5485 CCCACGCCCATCATGGCTGGCGTGCGCACACCCACTCGCCAGTTCAGCTCTTGCGTGCTG 5544 Query 73476 ATCAAAACTGGTGACACCCTGGACTCTATCAACGCAACGGCCAAGACCATCGTTGACTAT 73535 ||| || || |||| ||||||| ||||| || ||| ||| |||| ||| || Sbjct 5545 ATCGAATGTGACGACAGCCTGGACAGCATCAATGCCACGACCAGCGCCATTGTTCGTTAC 5604 Query 73536 GTGTCCAAACGCGCAGGTATCGGCTTCGACGTCGGGGCTATCCGTGGGATTGGCAGTCCT 73595 ||||| | || || |||||||| || | | || || || | | ||||| Sbjct 5605 GTGTCACAGCGTGCCGGTATCGGTATCAATGGTGGCCGCATTCGCGCCGTAGGCAGCGAA 5664 Query 73596 ATTCGCGGCGGAGAGATGGTTCACACAGG---CCTGATCCCATTCATCAAGTATCTCACT 73652 ||||| || || || ||||| || |||| || ||| ||||| || | | Sbjct 5665 ATTCGTGGTGGTGAAGCACAACACACGGGTTGCCTG---CCGTTCTTCAAG-ATGTTCCA 5720 Query 73653 GGG-GCGCTCAAGTCGTGCTCCCAGGGCGGCATTCGTGGTGGTGCGGCAACAGCGTACAT 73711 || ||| | ||||| ||||| || |||||| | ||||||||||||||||| || | Sbjct 5721 GGCTGCGGTGAAGTCCTGCTCGCAAGGCGGCGTGCGTGGTGGTGCGGCAACCTTGTTCTA 5780 Query 73712 CCCTCTGTGGCAT-TACCAGTTCGATGACGTCGTTGTACTGAAGAATAACCGTGGTACTG 73770 ||| ||||||| | ||| | || | | || |||||||| ||||||||| | Sbjct 5781 CCCCATGTGGCACCTGGAAGTGGAAACACTGC-TGGTTCTGAAGAACAACCGTGGTGTGG 5839 Query 73771 AAGAGAACCGCGAACGCCGTATCGACTATGGTATTCAGATCAACCGCGTGATGTTTGAGC 73830 |||| ||||| || | | ||||| ||| |||||||||||||| || ||| ||| Sbjct 5840 AAGAAAACCGTATTCGTCACTTGGACTACGGTGTTCAGATCAACCGCTTGCTGTACCAGC 5899 Query 73831 GCCTGGTTGCCAA--GCAACC-TCTGTATCTGTTCGACCCGAAAGACAACCGCGAAATGT 73887 ||||| | ||| ||| || | | |||||| ||| | ||| | || ||| Sbjct 5900 GCCTGAT---CAAGGGCAGCCATATCACGCTGTTCTCGCCGCACGACGTGCCCGGCCTGT 5956 Query 73888 ACGAAGCATACTTCGCTGACGTTGACAAGTTCCGTACTCTGTACGA 73933 ||||||| | ||| || ||| ||| ||||| ||||||||| Sbjct 5957 ACGAAGCCTTCTTTGCCGACCAGGACGAGTTCGAGCGTCTGTACGA 6002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510620860966400