Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_019925.1
Length=152427
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 149 6e-31
>seq2257
Length=8409
Score = 149 bits (164), Expect = 6e-31
Identities = 360/529 (68%), Gaps = 22/529 (4%)
Strand=Plus/Minus
Query 51281 TCGTACAGGACACG-GAACTTGTCAACGTCGGCGAAGTAAGCCTCATACATGTCAGGATT 51339
|||||||| || | ||||| ||| |||||| ||| | || || |||| | | ||
Sbjct 6002 TCGTACAG-ACGCTCGAACTCGTCCTGGTCGGCAAAGAAGGCTTCGTACAGGCCGGGCAC 5944
Query 51340 GTCTTTCGGGTCGAACAGATACAGA-GGCTGC--TTGGCAACCAGGCGCTCAAACATCAC 51396
||| | ||| |||||| | | |||||| ||| | |||||||| ||| ||
Sbjct 5943 GTCGTGCGGCGAGAACAGCGTGATATGGCTGCCCTTG---ATCAGGCGCTGGTACAGCAA 5887
Query 51397 GCGGTTGATCTGAATACCGTAGTCGATGCGACGTTCGCGGTTCTCTTCTGTTCCACGGTT 51456
|||||||||||||| ||||||||| | | |||| ||||| ||||| ||||||||
Sbjct 5886 GCGGTTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTT 5827
Query 51457 GTTCTTCAGGACAACGACGTCATCGAACTGGTA-GTGCCACAGGGGGATGTACCCTGTCG 51515
||||||||| || | | || | ||| | |||||||| |||| | || || |
Sbjct 5826 GTTCTTCAGAACCA-GCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAGGTTG 5768
Query 51516 CTGCACCGCCGCGAATGCCGCCCTGAGAGCACGACTTGAGCGC-CCCAGTGAGATACTTG 51574
| ||||| || || | |||||| || ||||| ||||| | ||| || | | || ||||
Sbjct 5767 CCGCACCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACAT-CTTG 5709
Query 51575 ATGAACGGGATCAGG---CCTGTGTGAACCATCTCTCCGCCGCGAATAGGACTACCAATA 51631
| |||||| |||| || ||||| || || || ||||| || || ||
Sbjct 5708 AAGAACGG---CAGGCAACCCGTGTGTTGTGCTTCACCACCACGAATTTCGCTGCC--TA 5654
Query 51632 CCACG-GATTGC-CCCGAAGTCGAAACCGATACCAGCGCGTTTTGACACATAGTCAACGA 51689
| || || ||| || | || ||||||||| || || | |||||| || ||| |
Sbjct 5653 CGGCGCGAATGCGGCCACCATTGATACCGATACCGGCACGCTGTGACACGTAACGAACAA 5594
Query 51690 TGGTCTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCACCAGTCTTGATCAACACACATG 51749
||| ||| ||| || ||||| ||||||| |||| || | ||||| ||| || |
Sbjct 5593 TGGCGCTGGTCGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAG 5534
Query 51750 AGCTGAACTGACGGGTAGGAGTACGAACACCGGCCATGATCGGGGTTGG 51798
|||||||||| || || || || || || || |||||||| || || ||
Sbjct 5533 AGCTGAACTGGCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGG 5485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 487592622945200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |