Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_019925.1 Length=152427 Score E Sequences producing significant alignments: (Bits) Value seq2257 149 6e-31 >seq2257 Length=8409 Score = 149 bits (164), Expect = 6e-31 Identities = 360/529 (68%), Gaps = 22/529 (4%) Strand=Plus/Minus Query 51281 TCGTACAGGACACG-GAACTTGTCAACGTCGGCGAAGTAAGCCTCATACATGTCAGGATT 51339 |||||||| || | ||||| ||| |||||| ||| | || || |||| | | || Sbjct 6002 TCGTACAG-ACGCTCGAACTCGTCCTGGTCGGCAAAGAAGGCTTCGTACAGGCCGGGCAC 5944 Query 51340 GTCTTTCGGGTCGAACAGATACAGA-GGCTGC--TTGGCAACCAGGCGCTCAAACATCAC 51396 ||| | ||| |||||| | | |||||| ||| | |||||||| ||| || Sbjct 5943 GTCGTGCGGCGAGAACAGCGTGATATGGCTGCCCTTG---ATCAGGCGCTGGTACAGCAA 5887 Query 51397 GCGGTTGATCTGAATACCGTAGTCGATGCGACGTTCGCGGTTCTCTTCTGTTCCACGGTT 51456 |||||||||||||| ||||||||| | | |||| ||||| ||||| |||||||| Sbjct 5886 GCGGTTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTT 5827 Query 51457 GTTCTTCAGGACAACGACGTCATCGAACTGGTA-GTGCCACAGGGGGATGTACCCTGTCG 51515 ||||||||| || | | || | ||| | |||||||| |||| | || || | Sbjct 5826 GTTCTTCAGAACCA-GCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAGGTTG 5768 Query 51516 CTGCACCGCCGCGAATGCCGCCCTGAGAGCACGACTTGAGCGC-CCCAGTGAGATACTTG 51574 | ||||| || || | |||||| || ||||| ||||| | ||| || | | || |||| Sbjct 5767 CCGCACCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACAT-CTTG 5709 Query 51575 ATGAACGGGATCAGG---CCTGTGTGAACCATCTCTCCGCCGCGAATAGGACTACCAATA 51631 | |||||| |||| || ||||| || || || ||||| || || || Sbjct 5708 AAGAACGG---CAGGCAACCCGTGTGTTGTGCTTCACCACCACGAATTTCGCTGCC--TA 5654 Query 51632 CCACG-GATTGC-CCCGAAGTCGAAACCGATACCAGCGCGTTTTGACACATAGTCAACGA 51689 | || || ||| || | || ||||||||| || || | |||||| || ||| | Sbjct 5653 CGGCGCGAATGCGGCCACCATTGATACCGATACCGGCACGCTGTGACACGTAACGAACAA 5594 Query 51690 TGGTCTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCACCAGTCTTGATCAACACACATG 51749 ||| ||| ||| || ||||| ||||||| |||| || | ||||| ||| || | Sbjct 5593 TGGCGCTGGTCGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAG 5534 Query 51750 AGCTGAACTGACGGGTAGGAGTACGAACACCGGCCATGATCGGGGTTGG 51798 |||||||||| || || || || || || || |||||||| || || || Sbjct 5533 AGCTGAACTGGCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGG 5485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487592622945200