Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_019929.1
Length=243050
Score E
Sequences producing significant alignments: (Bits) Value
seq2290 122 1e-22
>seq2290
Length=1989
Score = 122 bits (134), Expect = 1e-22
Identities = 136/182 (75%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 123072 TGTCCTGTCAGCTGTATCAGCGCAGTGCTGACATGTTCCTAGGCGTACCGTTTAACATTG 123131
||||||| ||||| || ||||||||||| || || ||||| || || || || || || |
Sbjct 996 TGTCCTGCCAGCTCTACCAGCGCAGTGCGGATATTTTCCTGGGTGTGCCCTTCAATATCG 937
Query 123132 CCTCTTACGCGCTCCTGATACACATGTTTGCCCAGCAGGCCAATATGGCAGTAGGTGACT 123191
|| ||||| || |||| |||||| | |||||||| || ||| ||| || ||||
Sbjct 936 CCAGCTACGCTCTGCTGACCCACATGATGGCCCAGCAATGTGATCTGGAAGTGGGCGACT 877
Query 123192 TCGTGTGGACGGGTGGGGATGTGCATCTGTACTCCAACCACCTGGAGCAGGCAGATTTGC 123251
|| | |||||||| || || || ||||| ||||||||| | ||||| || || ||||
Sbjct 876 TCATTTGGACGGGCGGCGACTGCCACCTGTATTCCAACCACTTCGAGCAAGCCGAATTGC 817
Query 123252 AG 123253
||
Sbjct 816 AG 815
Score = 95.1 bits (104), Expect = 2e-14
Identities = 168/245 (69%), Gaps = 0/245 (0%)
Strand=Plus/Minus
Query 122414 AAAGCAGACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGAC 122473
|||| ||||| || || || ||||| ||| |||| || ||||||||||| ||
Sbjct 1420 AAAGGTGACCGCACAGGTACCGGCACGAACTCGGTATTTGGTCACCAAATGCGCTTCGAT 1361
Query 122474 CTGCAAAAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCAT 122533
||| | ||||||||| || |||| ||||| ||| | ||| |||| |||| | |
Sbjct 1360 CTGTCGCAGGGTTTCCCGTTGATCACCACCAAGAAGCTGCACACCCGCAGCATCTTTATT 1301
Query 122534 GAGCTTCTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTC 122593
|| | |||||||| | || || |||| | | | ||| |||| | |||
Sbjct 1300 GAATTGCTGTGGTTTTTGCGCGGTGAGTCCAATGTGCGCTGGCTGCAAGAGCGCGGCGTA 1241
Query 122594 AGTATCTGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAA 122653
||||||||||||||||| || || || || ||||| |||||||| || || ||||
Sbjct 1240 TCCATCTGGGATGAATGGGCCGACGAGGACGGCAATCTGGGCCCGGTCTATGGCGTGCAA 1181
Query 122654 TGGCG 122658
|||||
Sbjct 1180 TGGCG 1176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 777558999796000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |