Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_020201.1 Length=142349 Score E Sequences producing significant alignments: (Bits) Value seq2257 194 2e-44 >seq2257 Length=8409 Score = 194 bits (214), Expect = 2e-44 Identities = 207/271 (76%), Gaps = 2/271 (1%) Strand=Plus/Minus Query 76460 GAACGCCCAAGTCTCTACCCATGTTTCCAGGGT-GGTGTCGGATACGATCGGCAGAAGAA 76518 ||| ||||| || || | ||| |||||||| || ||| |||| | ||||| | Sbjct 7500 GAAAGCCCAGGTTTCAATCCAGGTTTCCAGCTCCGGAATCG-ATACCAAAGGCAGGAAGG 7442 Query 76519 CTGCGTTCGGCCCACGGCCCTGTACAGAATCCAGGAGGATCTGGTACTTCAGGTTGCTGA 76578 | |||| || | |||||||| | |||||||| | | |||| |||||||| ||||||| Sbjct 7441 CCACGTTGGGGCTGCGGCCCTGGATGGAATCCAGCAAGGTCTGATACTTCAGATTGCTGA 7382 Query 76579 TGAAGATGTGCTTCTCGTGATCCGGCAGGTTCATGTAGTCGATTCGGTCACGGGTCACGT 76638 |||| |||||||| ||||| || ||||||||| |||||||| ||||| |||| | || Sbjct 7381 TGAAAATGTGCTTTTCGTGGTCAGGCAGGTTCTGATAGTCGATCCGGTCCTGGGTAATGT 7322 Query 76639 TAACTTCTTCAGGTCGCCAGAAGAACGCCAGTTGCTTTTCAATCAGCTTCTCGAACTTCG 76698 ||||| || || ||||||||||| | || ||||||||||||||||| || || ||| Sbjct 7321 CCACTTCCTCCGGACGCCAGAAGAAGGACAACTGCTTTTCAATCAGCTTTTCAAAAATCG 7262 Query 76699 CATGTTTCTGCTGGTCGTAGCGAGAAACGTT 76729 || ||| |||||||||||||||| ||||| Sbjct 7261 GATATTTTTGCTGGTCGTAGCGAGCCACGTT 7231 Score = 109 bits (120), Expect = 5e-19 Identities = 210/310 (68%), Gaps = 0/310 (0%) Strand=Plus/Minus Query 77753 GGATTTCTTGAAGGAAATCGCATCACGAGGGGGCTCGAATCCGTTGGTGGAGTTGGTGAT 77812 ||| | ||||| ||| | | | |||| || ||||| | || ||||||| |||| || Sbjct 6804 GGACTGCTTGACGGATACCAGACCACGCGGAGGCTCAATACCATTGGTGGCATTGGCAAT 6745 Query 77813 TTGGCTGGATGTCTCGCAAGGCATCATCGTGGACAGCGTGGAGTTACGCAGGCCATGAAT 77872 |||||||| || || ||||||||| | || ||| || ||||| ||||| || || | Sbjct 6744 CTGGCTGGAGGTTTCCGAAGGCATCAAGGCGGTCAGGGTCGAGTTGCGCAGACCGTGCTT 6685 Query 77873 GGCGATGTCGATACGCAGCTTTTCCCAATCCATCTTCAGTTCCGCAGTGTGGAGTCCATC 77932 | |||| || |||||| ||||||||||| | ||| | | || || || || Sbjct 6684 GACGATATCAGCACGCAGGGCTTCCCAATCCAGGTGCAGCGGCTCGTTGCAGATACCGTC 6625 Query 77933 CACTTCTTTCTTGTAACGGTCGATCGGTAGAATACCCTGAGAGTAGGTGGTCTCGTGGAA 77992 ||| ||||||||||| |||| | || || | ||| | ||| || || || | ||| Sbjct 6624 CACATCTTTCTTGTAGGTGTCGGTAGGCAGCAAACCAGCGGCGTACGTCGTTTCATCGAA 6565 Query 77993 GAGATCACATTTACCCAGTTCTTTTGCCAGGTCAACCGATGCTTCCAGCAGGTAATACTG 78052 | ||| || ||| ||| | || | ||||| || | || |||||| ||||| Sbjct 6564 GGCATCGCAAGGACCGTATTCGCGCGACAACTGCACCGAAGCCTTCAACAGGTAGTACTG 6505 Query 78053 GAATGCTTCA 78062 || |||||| Sbjct 6504 GATGGCTTCA 6495 Score = 104 bits (114), Expect = 2e-17 Identities = 120/162 (74%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 75129 TGGGTGCCGGACAAATGCAAGGCTTCATCACGAGCAATCAGTTCGATAATGTTGGTGTTG 75188 || ||||| | || ||||| ||||||||||| ||||||| || || |||| ||| Sbjct 7898 TGCGTGCCAGTCAGATGCAGCGCTTCATCACGCGCAATCAAGCGAATGATCTTGGCATTG 7839 Query 75189 CCCAGCATTACCCCGCGCTCACCGAAGGCGAAGGAGCAGGCAAAGCTCACGTAGAAGCGG 75248 || ||| | | |||||| | ||||||||||||||||||||||| ||||| |||||| Sbjct 7838 CCTTCCATCAGCTTGCGCTCGGCAAAGGCGAAGGAGCAGGCAAAGCTGACGTAAAAGCGG 7779 Query 75249 ATCGCTTCCAGTGCGTTGATGTTGTGAAGGCACAGGTACAGC 75290 || || || || |||| | | | ||||||||||||| Sbjct 7778 ATGGCCTCAAGAATATTGACGCTCATCATGCACAGGTACAGC 7737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 455346050376400