Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_020488.1 Length=38682 Score E Sequences producing significant alignments: (Bits) Value seq5432 152 1e-32 >seq5432 Length=1936 Score = 152 bits (168), Expect = 1e-32 Identities = 208/289 (72%), Gaps = 1/289 (0%) Strand=Plus/Plus Query 25828 CCACTTGCGCGTGCGCAACTTGCCTTCAATGTAAAGCTTTGAGCCTTTGCGTGTGTACTC 25887 ||||| ||| || ||| |||||| || ||||| | || || || ||||| |||||| Sbjct 230 CCACTCGCGGGTCTGCAGCTTGCCCTCGATGTACACCTGCGAACCCTTGCGCAGGTACTC 289 Query 25888 GCCGGCCACCTCTGCCAACTTCCCGTATAACACAACACGGTGCCACTCTGTTTTTTCTAC 25947 |||||| | ||| || | ||| ||| | | | ||||||||||||||| || || || Sbjct 290 GCCGGCAATCTCGGCAACCTTGCCGAACATCGAAACACGGTGCCACTCGGTACGCTCGAC 349 Query 25948 CGGCTGCCCTGTCTGCTTGTCTTTGTACTGCTCACTGGTGGCAATGCTTAAATTTGCCAC 26007 | ||| || ||||||||||| | ||||||| |||||||| | ||| | || | ||| Sbjct 350 CTTCTGGCCGGTCTGCTTGTCGGTCCACTGCTCGCTGGTGGCCAGGCTGAGGTTGGTCAC 409 Query 26008 GGCGGTACCGTTAGGCATATACCTAACTTCCGGGTCCTGGCCTAAGTTGCCGACAATGAT 26067 ||| | ||||| |||| | | |||||| ||||||||||| | ||||||| | || Sbjct 410 CGCGTTGCCGTTGGGCAGGTGGCGAACTTCAGGGTCCTGGCCGCAAGTGCCGACCAAAAT 469 Query 26068 TACCTTGTTAATTCCGCGTGCCATTGCGCTCCTCCAAAGTTTGCCAGGC 26116 || ||||||| || || ||||| || | |||| | | ||| || || Sbjct 470 GACTTTGTTAACCCCACGGGCCATAACG-TTCTCCTAGGCTTGGCACGC 517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123649771775280