Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_020488.1
Length=38682
Score E
Sequences producing significant alignments: (Bits) Value
seq5432 152 1e-32
>seq5432
Length=1936
Score = 152 bits (168), Expect = 1e-32
Identities = 208/289 (72%), Gaps = 1/289 (0%)
Strand=Plus/Plus
Query 25828 CCACTTGCGCGTGCGCAACTTGCCTTCAATGTAAAGCTTTGAGCCTTTGCGTGTGTACTC 25887
||||| ||| || ||| |||||| || ||||| | || || || ||||| ||||||
Sbjct 230 CCACTCGCGGGTCTGCAGCTTGCCCTCGATGTACACCTGCGAACCCTTGCGCAGGTACTC 289
Query 25888 GCCGGCCACCTCTGCCAACTTCCCGTATAACACAACACGGTGCCACTCTGTTTTTTCTAC 25947
|||||| | ||| || | ||| ||| | | | ||||||||||||||| || || ||
Sbjct 290 GCCGGCAATCTCGGCAACCTTGCCGAACATCGAAACACGGTGCCACTCGGTACGCTCGAC 349
Query 25948 CGGCTGCCCTGTCTGCTTGTCTTTGTACTGCTCACTGGTGGCAATGCTTAAATTTGCCAC 26007
| ||| || ||||||||||| | ||||||| |||||||| | ||| | || | |||
Sbjct 350 CTTCTGGCCGGTCTGCTTGTCGGTCCACTGCTCGCTGGTGGCCAGGCTGAGGTTGGTCAC 409
Query 26008 GGCGGTACCGTTAGGCATATACCTAACTTCCGGGTCCTGGCCTAAGTTGCCGACAATGAT 26067
||| | ||||| |||| | | |||||| ||||||||||| | ||||||| | ||
Sbjct 410 CGCGTTGCCGTTGGGCAGGTGGCGAACTTCAGGGTCCTGGCCGCAAGTGCCGACCAAAAT 469
Query 26068 TACCTTGTTAATTCCGCGTGCCATTGCGCTCCTCCAAAGTTTGCCAGGC 26116
|| ||||||| || || ||||| || | |||| | | ||| || ||
Sbjct 470 GACTTTGTTAACCCCACGGGCCATAACG-TTCTCCTAGGCTTGGCACGC 517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123649771775280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |