Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq2257 89.7 7e-13 >seq2257 Length=8409 Score = 89.7 bits (98), Expect = 7e-13 Identities = 192/285 (67%), Gaps = 14/285 (5%) Strand=Plus/Minus Query 117583 GCTGCCCTGACGGGGTACTCCTGGTAGTCGATGAGTTCTTCCAGACCACGAACAGCAAGG 117642 || ||| |||| ||||| ||||||||||| | || | |||||| |||||||| || Sbjct 6371 GCAGCCTTGACCGGGTAGTCCTGGTAGTCCAGCAGAGCATCCAGAGCACGAACAATCAGT 6312 Query 117643 TCACATAGGTTCTCCATCTCCTCAAGGTTCTTGAGTTTGCCAACGTTGATAGCAGACAGA 117702 ||| || |||| ||| || ||| || || || | ||||| ||| ||||| Sbjct 6311 TCAGCCAGACCGTCCAGCTCGTCCAGGGACTCCAGAGCACCCAGGTTGAAAGCCGACAGC 6252 Query 117703 ATGCACAGAGCAATCTCACCATCACCATCG---ATAT-GTTCAATGGGATCTGTAGGCAG 117758 ||||||| || || ||||| ||| |||| | || |||||| || | |||||||| Sbjct 6251 GTGCACAGCGCGATTTCACCTTCAGGATCGTTCAGATCGTTCAA-AGGCTTGGTAGGCAG 6193 Query 117759 GGTGATCTCCTGACACAGGTTGGACATGTTCAC---------CTTGTCCAGGAAGGAACT 117809 | ||| ||| |||||||||||| | ||| | || |||| | || Sbjct 6192 AGCGATTTCCATGCACAGGTTGGACTGGCGCACAGGAGCGCGGTCAGCCTGGAATGGGCT 6133 Query 117810 GTGAGTGTTGCAGTGGTCGATGTTCATCAGGTAGATGCGACCAGT 117854 ||| |||||||| ||||| | |||| | |||||| || || || Sbjct 6132 GTGCGTGTTGCAATGGTCCACGTTCTGAATGTAGATACGGCCGGT 6088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633454128910800