Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_021073.1 Length=107218 Score E Sequences producing significant alignments: (Bits) Value seq2257 351 7e-92 >seq2257 Length=8409 Score = 351 bits (388), Expect = 7e-92 Identities = 615/889 (69%), Gaps = 10/889 (1%) Strand=Plus/Plus Query 9245 ATCTCCCTCCCGACACCAATCATGTCTGGTGTTCGTACACCGACCCGCCAATTCAGCTCA 9304 || ||| | || || || |||||| |||| || || ||||| || ||||| |||||||| Sbjct 5476 ATTTCCTTGCCCACGCCCATCATGGCTGGCGTGCGCACACCCACTCGCCAGTTCAGCTCT 5535 Query 9305 TGCGTAAAAATCGAAAGCGGTGATAGCCTAAAATCAATCAATGCAACATCAGGCGCAATC 9364 ||||| |||||| | | || ||||| | |||||||| || | |||| || Sbjct 5536 TGCGTGCTGATCGAATGTGACGACAGCCTGGACAGCATCAATGCCACGACCAGCGCCATT 5595 Query 9365 GTGAGTTACGTTTCACAGCGTGCAGGTATTGGCATTAACGCGGGTCGTATCCGAGCATTA 9424 || ||||||| ||||||||||| ||||| || || || | || || || || || || Sbjct 5596 GTTCGTTACGTGTCACAGCGTGCCGGTATCGGTATCAATGGTGGCCGCATTCGCGCCGTA 5655 Query 9425 GGTTCTGAGATTCGTGGTGGTGAAGCGGTACATACTGGTTGTATCCCATTCTACAAACAC 9484 || || ||||||||||||||||| ||| || ||||| | || |||| ||| Sbjct 5656 GGCAGCGAAATTCGTGGTGGTGAAGCACAACACACGGGTTGCCTGCCGTTCTTCAAGATG 5715 Query 9485 TTCCAAACAGCAGTGAAATGTTGTAGCCAAGGCGGTGTTCGTGGCGGCGCGGCAACGGTA 9544 ||||| | || ||||| | || |||||||| || ||||| || |||||||| | Sbjct 5716 TTCCAGGCTGCGGTGAAGTCCTGCTCGCAAGGCGGCGTGCGTGGTGGTGCGGCAACCTTG 5775 Query 9545 TTCTACCCAATGTGGCACCTAG-AGTACAAATCACTAATCGTACTCAAGAACAACCGTGG 9603 |||||||| ||||||||||| | ||| ||| |||| | || || |||||||||||||| Sbjct 5776 TTCTACCCCATGTGGCACCTGGAAGTGGAAA-CACTGCTGGTTCTGAAGAACAACCGTGG 5834 Query 9604 TATCGAAGAAAACCGTGTACGTCATATGGACTACGGTGTACAAATTAATGGCCTGATGTA 9663 | | |||||||||||| | ||||| ||||||||||||| || || || || || |||| Sbjct 5835 TGTGGAAGAAAACCGTATTCGTCACTTGGACTACGGTGTTCAGATCAACCGCTTGCTGTA 5894 Query 9664 TAAGCGTCTGCTGTCTGGTCAG-AACATCACTTTATTCTCACCTCATAGTGTACCGGGTC 9722 |||| ||| | || ||| | ||||| | ||||| || || || || || | Sbjct 5895 CCAGCGCCTGAT-CAAGGGCAGCCATATCACGCTGTTCTCGCCGCACGACGTGCCCGGCC 5953 Query 9723 TATACGATGCATACTTCGAAGACCAAGATAAGTTCGAGCGACTGTACACCAAAGCGGAAT 9782 | ||||| || | ||| | ||||| || |||||||||| |||||| | || Sbjct 5954 TGTACGAAGCCTTCTTTGCCGACCAGGACGAGTTCGAGCGTCTGTACGAAATGTACGAGC 6013 Query 9783 CTGATCCATCAATCGAAAAAGACACAATCTCTGCTAAGGAAGCATTCAGCATACTAATGC 9842 ||||| | ||| || || | | || ||| ||| | | || |||| Sbjct 6014 AGGATCCTGCCATCCGCAAGCGCAGCCTGCCAGCCGTGGAGCTGTTCTCCTTGCTGATGC 6073 Query 9843 AAGAGCGTGCTTCTACAGGTCGCATCTACATTCAGCACGTAGATCACTGTAACATTAACG 9902 |||||||||| || || || |||||||||||| |||| || || || |||| || Sbjct 6074 AAGAGCGTGCCAGCACCGGCCGTATCTACATTCAGAACGTGGACCATTGCAACACGCACA 6133 Query 9903 GTCCTTTC---GATGAGCGCGTTGCACCAGTACGCCAATCAAACCTATGTATGGAAATCG 9959 | || ||| | ||| ||| || || || ||||| || ||||| || |||||||||| Sbjct 6134 GCCCATTCCAGGCTGACCGC---GCTCCTGTGCGCCAGTCCAACCTGTGCATGGAAATCG 6190 Query 9960 CACTACCAACCAAACCGTTGAATAACGTCGATGATCCTGATGGTGAAGTTGCGCTATGTA 10019 | || || ||||| || ||||| | | | |||||||| |||||| | ||||| || | Sbjct 6191 CTCTGCCTACCAAGCCTTTGAACGATCTGAACGATCCTGAAGGTGAAATCGCGCTGTGCA 6250 Query 10020 CTCTATCTGCATTCAACTTGGGTAAGATTGAATCGGTTGGTGATTTTGAGCGTCTGTCTC 10079 | || || || |||||| ||||| | || || | | || | || ||||| || Sbjct 6251 CGCTGTCGGCTTTCAACCTGGGTGCTCTGGAGTCCCTGGACGAGCTGGACGGTCTGGCTG 6310 Query 10080 GTATCGTTGTGCGTGCATTGGATAATCTGTTAGACTACCAAAACTACCC 10128 | |||| ||||| ||||| |||| | |||||||| ||||||| Sbjct 6311 AACTGATTGTTCGTGCTCTGGATGCTCTGCTGGACTACCAGGACTACCC 6359 Score = 311 bits (344), Expect = 6e-80 Identities = 822/1245 (66%), Gaps = 64/1245 (5%) Strand=Plus/Plus Query 10437 TGCGTAATGAGATTGTCCATAATGGCCTACGTAACTCTACTCTATCTGCATTCATGCCTT 10496 ||||| ||| || ||| | | || || || ||||| || || | || || ||||||| Sbjct 6668 TGCGTGCTGATATCGTCAAGCACGGTCTGCGCAACTCGACCCTGACCGCCTTGATGCCTT 6727 Query 10497 CGGAAACATCTTCTCAGGTATCTAACGCAACAAACGGCATCGAACCACCTCGTGGCTACA 10556 ||||||| || ||| | | || || || || || || || || || ||||| Sbjct 6728 CGGAAACCTCCAGCCAGATTGCCAATGCCACCAATGGTATTGAGCCTCCGCGTGGTCTGG 6787 Query 10557 TGTCAGTTAAGCAGTCGAAGGATGGCATCTTAAAACAAATCGTACCGGGTTATGATAAAT 10616 | || || |||||||| ||||| || ||||| || | || || | | ||| |||| Sbjct 6788 TATCCGTCAAGCAGTCCAAGGACGGTATCTTGCGTCAGGTGGTGCCTGAATTTGAAAAAT 6847 Query 10617 ACAAAGACCAATACGAGTTACTATGGAATATCAAAGACAACACTGGTTACTTGGAATTGG 10676 | || || || ||||| || || ||| | || | |||| | ||| || | |||| Sbjct 6848 ATAAGGATCAGTACGAATTGCTGTGGCAAATGCCCGGCAACGACGACTACCTGAAGTTGG 6907 Query 10677 TTGCCATCATGCAGAAGTTTGTGGATCAGGCTATTTCAGCAAACACTAACTACGACCCAG 10736 ||| | | ||||||||||| || || ||| | || || || ||||| ||||| |||||| Sbjct 6908 TTGGCGTGATGCAGAAGTTCGTTGACCAGTCGATCTCTGCGAACACCAACTATGACCCAC 6967 Query 10737 AAAACTACCCAGAAAGTAAGGTTCCAATCAAAAAGTTATTGCAAGATTTGGTGACATGTT 10796 | | | | || || || || || | | | | || || || | Sbjct 6968 AGCGGTTCGAGGGTGGTCGCGTACCGATGAAGCAACTGCTCAAGGACCTGCTGCTGGCCT 7027 Query 10797 ATAGACTCGGCATCAAGACACTGTACTACCACAACACACGAGATGGTGCTAGTGATGAAC 10856 | | | ||| | ||||| |||||||||||||||| || || ||||| |||| | Sbjct 7028 ACAAATACGGTGTGAAGACCTTGTACTACCACAACACCCGCGACGGTGCCGATGATTCGC 7087 Query 10857 A----GAA--AGAAGACGATGGTGGCTGCGATGGTGGTGGCTGCAAAATTTAAGGA---G 10907 | ||| ||| ||||| ||| |||| || || | ||||| || |||| | | Sbjct 7088 ATGGCGAAGTAGAGGACGACGGT---TGCGCAGGCGGCGCGTGCAAGATCTAAGCAAGGG 7144 Query 10908 T------CATGATGAAT---TATTCAGTATTTAACC--AAACAAAAAACGACCAACTGAA 10956 | ||| |||| | ||| |||| || | |||| | |||||||| || || Sbjct 7145 TAAAGAGCATCATGACTACCTAT--AGTACTTTTTCTAAAACGGATAACGACCAGCTCAA 7202 Query 10957 GGAGCCGATGTTCTTCGGCCAATCAGTTAACGTATCCCGTTACGACCAACAGAAACATGA 11016 || || |||||||| || || | |||||||| | || |||||||| || ||| || Sbjct 7203 AGAACCCATGTTCTTTGGGCAGCCGGTTAACGTGGCTCGCTACGACCAGCAAAAATATCC 7262 Query 11017 TGTTTTTGAGAAACTAACTCAGAAGCAACTATCATTCTTCTGGCGTCCCGAAGAAGTTGA 11076 ||||||| || || | | | ||||| | || |||||||||||||| || ||||| || Sbjct 7263 GATTTTTGAAAAGCTGATTGAAAAGCAGTTGTCCTTCTTCTGGCGTCCGGAGGAAGTGGA 7322 Query 11077 TGTGTCACAAGACCGAATCGACTA-CAGTAAAATGACTGATGCGGAGAAACACATCTTCA 11135 | | || ||||| |||||||| ||| || || |||| || || ||||| |||| Sbjct 7323 CATTACCCAGGACCGGATCGACTATCAG-AACCTGCCTGACCACGAAAAGCACATTTTCA 7381 Query 11136 TTAGTAACCTGAAGTACCAAACATTACTCGACTCGATCCAAGGCCGTAGCCCGAATATGG 11195 | || || |||||||| || || || || || || ||||| ||||| ||||| || ||| Sbjct 7382 TCAGCAATCTGAAGTATCAGACCTTGCTGGATTCCATCCAGGGCCGCAGCCCCAACGTGG 7441 Query 11196 CGTTCCTGCCTATTGTGTCACTACCAGAAGTCGAAACTTGGGTAGAAACGTGGAGCTTCA 11255 | ||||||||| | || || | || || | ||||| ||| | ||||| ||| ||| Sbjct 7442 CCTTCCTGCCTTTGGTATCGATTCCGGAGCTGGAAACCTGGATTGAAACCTGGGCTTTCT 7501 Query 11256 GCGAAACCATCCACTCTCGTTCATACACACACATCATTCGCAATATTGTCAATGACCCTA 11315 ||| || || ||||| || || ||||| ||||||||||||||||||| ||||||||| Sbjct 7502 CCGAGACGATTCACTCGCGCTCGTACACGCACATCATTCGCAATATTGCCAATGACCCGT 7561 Query 11316 GTATTGTGTTCGATGATGTTGTTGAGAATAAGCACATCCTAGAGCGAGCTAAAGATA-TT 11374 || | || || || | || || || |||| | ||| || || | || Sbjct 7562 CCGTTATTTTTGACGACATCGTGCGCAACGAGAACATTCAGCTGCGTGCCGCCGACATTT 7621 Query 11375 GCTCGTTACTACGACGATCTCATCTTGG----CATGC--------------------AAA 11410 |||| |||||||||||||| ||| | ||||| Sbjct 7622 CCTCG-TACTACGACGATCTGATCAGCGACACCATGCTGTACGCCCAGCTGGGTGCAGGC 7680 Query 11411 GAGCATGAGCTAAACGG-CAAAC----ACACAATGCG----CGACCTAAAGAAAAAGTTG 11461 || || || | ||||| |||| || | | ||| ||| || ||||| ||| || Sbjct 7681 GAACACGAAATCAACGGTGAAACCCGTACGCTAAGCGTCTACGAGCTGAAGAAGAAGCTG 7740 Query 11462 TACTTGTGCATGATGGCTGTTAATGTATTAGAAGCAGTTCGTTTCTACGTTAGTTTCGCT 11521 ||| ||||||||||| || ||| | | || || | || || ||||| || || || Sbjct 7741 TACCTGTGCATGATGAGCGTCAATATTCTTGAGGCCATCCGCTTTTACGTCAGCTTTGCC 7800 Query 11522 TGTTCATTTGCATTCGCTGAACGCGAGATTATGGAAGGTAATGCTAAAATCATCAAGCTT 11581 || || || || || || || ||| || | |||||||| ||||| || ||||| |||| Sbjct 7801 TGCTCCTTCGCCTTTGCCGAGCGCAAGCTGATGGAAGGCAATGCCAAGATCAT-TCGCTT 7859 Query 11582 -ATTGCTCGTGATGAAGCACTACACCAAAGCGGTACACAGCACAT 11625 ||||| ||||||||||| || || | | || || || ||||| Sbjct 7860 GATTGCGCGTGATGAAGCGCTGCATCTGACTGGCACGCAACACAT 7904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 342941408342690