Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_021304.1 Length=51552 Score E Sequences producing significant alignments: (Bits) Value seq2872 187 8e-43 seq5543 141 3e-29 >seq2872 Length=1900 Score = 187 bits (206), Expect = 8e-43 Identities = 210/279 (75%), Gaps = 4/279 (1%) Strand=Plus/Plus Query 40755 ACGTACTGGATCACCTCGCCACGACGCCGGTCATC--GAAGTCGATGTCGACATCGGGCA 40812 ||||||| |||||| | | |||| || ||| |||||||| ||||| ||||||| Sbjct 412 ACGTACTCGATCACGCGGTCGCGAC--CGTCCATGCAGAAGTCGACGTCGAAGTCGGGCA 469 Query 40813 TGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGA 40872 | || || || || ||||| ||||| || ||||| | || ||| |||||||||||| Sbjct 470 TCGAGACCCGTTCAGGGTTGAGGAAACGTTCGAACAGCAGGTCGTAGGCCAGCGGGTCGA 529 Query 40873 GGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAGGGC 40932 ||||||||||| || |||||||| |||||||| ||||| | || || || || || | Sbjct 530 GGTCGGTGATCTTCAGCACGTAGGCCACCAGCGAGCCGGCACCCGACCCCCGGCCCGGAC 589 Query 40933 CGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACG 40992 | ||| |||||||| | ||| ||||| |||||||||| |||| |||||||| Sbjct 590 CTACCGGCACGCCGTTGTTCTTGGCCCACTTGATGAAGTCCATAACGATCAGGAAGTAAC 649 Query 40993 ACGGGAAGCCCATCTGGATGATCATGTCGATCTCGTACT 41031 |||||||||||||||||||| ||||| | |||| ||| Sbjct 650 CGGGGAAGCCCATCTGGATGATGATGTCCAGCTCGAACT 688 >seq5543 Length=16390 Score = 141 bits (156), Expect = 3e-29 Identities = 168/225 (75%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 40791 AAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATG 40850 ||||| | ||| | || ||||||||||||||||||||||||||||| || ||||| | Sbjct 8850 AAGTCCACGTCAAAGTCAGGCATGGACACGCGCTCGGGGTTCAGGAAACGTTCGAACAGC 8909 Query 40851 AGCCCGT-GCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACC 40909 | | | || | || ||||| |||||||| ||||| | | |||||| ||||| ||||| Sbjct 8910 AAGTCATAGCGCAAG-GGGTCCAGGTCGGTAATCCCCATGCTGTAGGCCACCAGGGAACC 8968 Query 40910 GGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAA 40969 || | |||||||| || || || || ||||| || | ||| ||||| ||||| Sbjct 8969 CGCACCCGAGCCTCGGCCTGGTCCTACGGGCACGCCATTGTGCTTGCCCCAGTTAATGAA 9028 Query 40970 GTCCGCGACGACGAGGAAGTACGACGGGAAGCCCATCTGGATGAT 41014 |||||| |||| |||||||| |||||| ||||| |||||| Sbjct 9029 GTCCGCCACGATCAGGAAGTAGCCCGGGAACCCCATGGAGATGAT 9073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164830098934680