Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_021304.1
Length=51552
Score E
Sequences producing significant alignments: (Bits) Value
seq2872 187 8e-43
seq5543 141 3e-29
>seq2872
Length=1900
Score = 187 bits (206), Expect = 8e-43
Identities = 210/279 (75%), Gaps = 4/279 (1%)
Strand=Plus/Plus
Query 40755 ACGTACTGGATCACCTCGCCACGACGCCGGTCATC--GAAGTCGATGTCGACATCGGGCA 40812
||||||| |||||| | | |||| || ||| |||||||| ||||| |||||||
Sbjct 412 ACGTACTCGATCACGCGGTCGCGAC--CGTCCATGCAGAAGTCGACGTCGAAGTCGGGCA 469
Query 40813 TGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGA 40872
| || || || || ||||| ||||| || ||||| | || ||| ||||||||||||
Sbjct 470 TCGAGACCCGTTCAGGGTTGAGGAAACGTTCGAACAGCAGGTCGTAGGCCAGCGGGTCGA 529
Query 40873 GGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAGGGC 40932
||||||||||| || |||||||| |||||||| ||||| | || || || || || |
Sbjct 530 GGTCGGTGATCTTCAGCACGTAGGCCACCAGCGAGCCGGCACCCGACCCCCGGCCCGGAC 589
Query 40933 CGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACG 40992
| ||| |||||||| | ||| ||||| |||||||||| |||| ||||||||
Sbjct 590 CTACCGGCACGCCGTTGTTCTTGGCCCACTTGATGAAGTCCATAACGATCAGGAAGTAAC 649
Query 40993 ACGGGAAGCCCATCTGGATGATCATGTCGATCTCGTACT 41031
|||||||||||||||||||| ||||| | |||| |||
Sbjct 650 CGGGGAAGCCCATCTGGATGATGATGTCCAGCTCGAACT 688
>seq5543
Length=16390
Score = 141 bits (156), Expect = 3e-29
Identities = 168/225 (75%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 40791 AAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATG 40850
||||| | ||| | || ||||||||||||||||||||||||||||| || ||||| |
Sbjct 8850 AAGTCCACGTCAAAGTCAGGCATGGACACGCGCTCGGGGTTCAGGAAACGTTCGAACAGC 8909
Query 40851 AGCCCGT-GCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACC 40909
| | | || | || ||||| |||||||| ||||| | | |||||| ||||| |||||
Sbjct 8910 AAGTCATAGCGCAAG-GGGTCCAGGTCGGTAATCCCCATGCTGTAGGCCACCAGGGAACC 8968
Query 40910 GGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAA 40969
|| | |||||||| || || || || ||||| || | ||| ||||| |||||
Sbjct 8969 CGCACCCGAGCCTCGGCCTGGTCCTACGGGCACGCCATTGTGCTTGCCCCAGTTAATGAA 9028
Query 40970 GTCCGCGACGACGAGGAAGTACGACGGGAAGCCCATCTGGATGAT 41014
|||||| |||| |||||||| |||||| ||||| ||||||
Sbjct 9029 GTCCGCCACGATCAGGAAGTAGCCCGGGAACCCCATGGAGATGAT 9073
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 164830098934680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |