Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_021339.1
Length=51077
Score E
Sequences producing significant alignments: (Bits) Value
seq2872 179 1e-40
seq5543 138 4e-28
>seq2872
Length=1900
Score = 179 bits (198), Expect = 1e-40
Identities = 185/242 (76%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 40250 GAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGAT 40309
|||||||| ||||| |||||||| || || || || ||||| ||||| || ||||| |
Sbjct 447 GAAGTCGACGTCGAAGTCGGGCATCGAGACCCGTTCAGGGTTGAGGAAACGTTCGAACAG 506
Query 40310 GAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACC 40369
|| ||| ||||||||||||||||||||||| || |||||||| |||||||| ||
Sbjct 507 CAGGTCGTAGGCCAGCGGGTCGAGGTCGGTGATCTTCAGCACGTAGGCCACCAGCGAGCC 566
Query 40370 GGCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCCTTCGCCCAGCGGATGAA 40429
||| | || ||||| || || || ||| || ||||| | ||| ||||| ||||||
Sbjct 567 GGCACCCGACCCCCGGCCCGGACCTACCGGCACGCCGTTGTTCTTGGCCCACTTGATGAA 626
Query 40430 GTCCGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGATGATCATGTCGATCTCGTA 40489
|||| |||| |||||||| ||||| |||||||||||||| ||||| | |||| |
Sbjct 627 GTCCATAACGATCAGGAAGTAACCGGGGAAGCCCATCTGGATGATGATGTCCAGCTCGAA 686
Query 40490 CT 40491
||
Sbjct 687 CT 688
>seq5543
Length=16390
Score = 138 bits (152), Expect = 4e-28
Identities = 167/225 (74%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 40251 AAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGATG 40310
||||| | ||| | || ||||||||||||||||||||||||||||| || ||||| |
Sbjct 8850 AAGTCCACGTCAAAGTCAGGCATGGACACGCGCTCGGGGTTCAGGAAACGTTCGAACAGC 8909
Query 40311 AGCCCGT-GCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACC 40369
| | | || | || ||||| |||||||| ||||| | | |||||| ||||| |||||
Sbjct 8910 AAGTCATAGCGCAAG-GGGTCCAGGTCGGTAATCCCCATGCTGTAGGCCACCAGGGAACC 8968
Query 40370 GGCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCCTTCGCCCAGCGGATGAA 40429
|| | ||||| || || || || || || || || | ||| ||||| |||||
Sbjct 8969 CGCACCCGAGCCTCGGCCTGGTCCTACGGGCACGCCATTGTGCTTGCCCCAGTTAATGAA 9028
Query 40430 GTCCGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGATGAT 40474
|||||| |||| |||||||| |||||||||||| ||||||
Sbjct 9029 GTCCGCCACGATCAGGAAGTAGCCCGGGAACCCCATGGAGATGAT 9073
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 163310234490180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |