Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_021344.2 Length=176227 Score E Sequences producing significant alignments: (Bits) Value seq2257 179 4e-40 >seq2257 Length=8409 Score = 179 bits (198), Expect = 4e-40 Identities = 295/423 (70%), Gaps = 2/423 (0%) Strand=Plus/Plus Query 41642 AAGCTGTCGTTACCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGTCAGTTTTCC 41701 ||| | || || || ||||| || |||||||| ||||| || || || || ||||| | Sbjct 5473 AAGATTTCCTTGCCCACGCCCATCATGGCTGGCGTGCGCACACCCACTCGCCAGTTCAGC 5532 Query 41702 AGTTGCGTAGTGATTGAATCAGGTGATTCACTGGGTTCTCTGAATGCTGTAACCTCTGCG 41761 |||||| |||| |||| | || |||| | ||||| ||| || Sbjct 5533 TCTTGCGTGCTGATCGAATGTGACGACAGCCTGGACAGCATCAATGCCACGACCAGCGCC 5592 Query 41762 ATCGTGAAGTATATTTCACAACGTGCTGGTATCGGTGTAAACGCCGGACATATTCGCGCG 41821 || || || | ||||| ||||| ||||||||| | || | || | |||||||| Sbjct 5593 ATTGTTCGTTACGTGTCACAGCGTGCCGGTATCGGTATCAATGGTGGCCGCATTCGCGCC 5652 Query 41822 ATGGGTTCTAAAATCCGTGGTGGTGAAGCAGTTCATACAGGCGTGATCCCGTTCTGGAAA 41881 | || |||| ||||||||||||||| || || || | ||||||| || Sbjct 5653 GTAGGCAGCGAAATTCGTGGTGGTGAAGCACAACACACGGGTTGCCTGCCGTTCTTCAAG 5712 Query 41882 CATATTC-AGACAGCGGTTAAATCCTGTTCACAAGGTGGTGTTCGTGGTGGTGCTGCAAC 41940 || ||| || | ||||| || ||||| || ||||| || || ||||||||||| ||||| Sbjct 5713 -ATGTTCCAGGCTGCGGTGAAGTCCTGCTCGCAAGGCGGCGTGCGTGGTGGTGCGGCAAC 5771 Query 41941 GTTGTATTATCCGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAAAACAACAA 42000 |||| || || || ||||| ||||||| |||| |||||||||||||| |||||| Sbjct 5772 CTTGTTCTACCCCATGTGGCACCTGGAAGTGGAAACACTGCTGGTTCTGAAGAACAACCG 5831 Query 42001 AGGTGTTGAAAACAACCGTATCCGTCACCTGGATTATGGCGTACAGCTTAACGATTTGAT 42060 ||||| ||| | |||||||| |||||| |||| || || || ||| | ||| ||| | Sbjct 5832 TGGTGTGGAAGAAAACCGTATTCGTCACTTGGACTACGGTGTTCAGATCAACCGCTTGCT 5891 Query 42061 GTA 42063 ||| Sbjct 5892 GTA 5894 Score = 122 bits (134), Expect = 1e-22 Identities = 192/272 (71%), Gaps = 6/272 (2%) Strand=Plus/Plus Query 43427 TTTGAAAAGCTGACTGAAAAACAACTGTCATTCTTCTGGCGACCGGAAGAAGTGGATCTG 43486 ||||||||||||| |||||| || |||| ||||||||||| ||||| |||||||| | Sbjct 7267 TTTGAAAAGCTGATTGAAAAGCAGTTGTCCTTCTTCTGGCGTCCGGAGGAAGTGGACATT 7326 Query 43487 TCGATTGACCGTATGCAGTATGCGAAAATGCCGGAACATGAAAAAATCATTTTCGATTCT 43546 | ||||| || | ||| ||| |||| || || ||||| ||||||| Sbjct 7327 ACCCAGGACCGGATCGACTATCAGAACCTGCCTGACCACGAAAAGCACATTTTCATCAGC 7386 Query 43547 AACCTGCAATATCAAACCCTACTGGATACCATTCAGGGACGCGGCCCTAACCTTGCATTT 43606 || ||| | ||||| ||| | |||||| |||| ||||| ||| |||| ||| | || || Sbjct 7387 AATCTGAAGTATCAGACCTTGCTGGATTCCATCCAGGGCCGCAGCCCCAACGTGGCCTTC 7446 Query 43607 CTCCCGATTGCCTCTGAT---GTATCAATGGAAACGTGGATCGAAACATGGGCGTTCAGT 43663 || || | | || ||| | | | ||||||| ||||| ||||| ||||| ||| Sbjct 7447 CTGCCTTTGGTATC-GATTCCGGAGC--TGGAAACCTGGATTGAAACCTGGGCTTTCTCC 7503 Query 43664 GAAACAATTCACAGTCGCAGTTATACGCACAT 43695 || || |||||| ||| || |||||||| Sbjct 7504 GAGACGATTCACTCGCGCTCGTACACGCACAT 7535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563745473425200