Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_021529.2
Length=247511
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 156 7e-33
>seq2257
Length=8409
Score = 156 bits (172), Expect = 7e-33
Identities = 310/452 (69%), Gaps = 14/452 (3%)
Strand=Plus/Plus
Query 63647 CTTTTACAACGCTGTATC--AAATCAGAAACTTTCTTTACCAACCCCGATCATGGCAGGT 63704
||||||| |||| ||||| || ||| | |||| || || || || |||||||| ||
Sbjct 5448 CTTTTACGACGCCGTATCGCAATTCAAGA--TTTCCTTGCCCACGCCCATCATGGCTGGC 5505
Query 63705 GTTCGTACGCCAACTCGACAATTTAGCTCATGTGTTAAAATCGAATCTGGCGACTCTCTG 63764
|| || || || ||||| || || ||||| || || ||||||| || |||| |||
Sbjct 5506 GTGCGCACACCCACTCGCCAGTTCAGCTCTTGCGTGCTGATCGAATGTGACGACAGCCTG 5565
Query 63765 CATTCAGTCAACAAAGTAGC---CGAAGCAATCATCAACTA--TATCAGTAAACGTGCTG 63819
| ||| || ||| | | | || || | || | ||| | ||||| |
Sbjct 5566 GA--CAG-CATCAATGCCACGACCAGCGCCATTGTTCGTTACGTGTCAC--AGCGTGCCG 5620
Query 63820 GTATCGGTGTTAATGGCGGTGCTATTCGTGCTGAAGGCTCGGTTGTTCGAGCAGGTGAAA 63879
|||||||| | ||||| || ||||| || | |||| | |||| | ||||||
Sbjct 5621 GTATCGGTATCAATGGTGGCCGCATTCGCGCCGTAGGCAGCGAAATTCGTGGTGGTGAAG 5680
Query 63880 TTCGACACACTGGTGTAATCCCATTCTGGAAACACTTTCAGACTGCTGTGAAGTCATGTT 63939
| |||||| ||| | || |||| || || ||| |||| |||||||| || |
Sbjct 5681 CACAACACACGGGTTGCCTGCCGTTCTTCAAGATGTTCCAGGCTGCGGTGAAGTCCTGCT 5740
Query 63940 CACAAGGTGGTGTTCGTGGTGGTGCTGCAACGCTAACTTACCCGATTTGGCATTTAGAAG 63999
| ||||| || || ||||||||||| ||||| | ||||| || ||||| | ||||
Sbjct 5741 CGCAAGGCGGCGTGCGTGGTGGTGCGGCAACCTTGTTCTACCCCATGTGGCACCTGGAAG 5800
Query 64000 TTGAAAAACTTTTGGTGCTGAAGAACAACAAAGGCGTTGAAGAAAACCGTATTCGTCATC 64059
| |||| ||| |||| |||||||||||| || || ||||||||||||||||||||
Sbjct 5801 TGGAAACACTGCTGGTTCTGAAGAACAACCGTGGTGTGGAAGAAAACCGTATTCGTCACT 5860
Query 64060 TTGACTACAGTGTGTCTATCAGTCGCTTGATG 64091
| |||||| |||| |||| |||||| ||
Sbjct 5861 TGGACTACGGTGTTCAGATCAACCGCTTGCTG 5892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 791832859711600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |