Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_021857.1 Length=41475 Score E Sequences producing significant alignments: (Bits) Value seq5893 86.0 2e-12 >seq5893 Length=2160 Score = 86.0 bits (94), Expect = 2e-12 Identities = 205/305 (67%), Gaps = 9/305 (3%) Strand=Plus/Plus Query 39323 TTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATAAC 39382 |||||||||||||| || || |||||||| ||||| | || |||| ||||||| | | Sbjct 417 TTATCCCAGCAGTTGCCTCGGCGGCTCATGCTCTGGCGCATGCGGTAGCGCCACAGTCTC 476 Query 39383 TGCCCGGAACTGCCTGCTCGTATAATGACTGCCCTGATCGCTGTGGAACATCACCCCGCC 39442 || |||||||| | || ||| || ||||| ||| ||| |||| || ||| Sbjct 477 TG-GCGGAACTGACGACTGCCATATTGCGATCCCTGGTCGGAGTGAAACAGCAGCCCTTG 535 Query 39443 GGGCTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGA-GCCTGCTGTCCG 39501 ||||| ||||| ||| | |||| ||||||||||| | || | |||| || || Sbjct 536 AGGCTTTCCACGTTGTTCGTAAGCCACGTCCAGCGCTTTGACCACGAGGTCTGC-GTTCG 594 Query 39502 GCGAGAACGACATGGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGA 39561 || || | ||||||||||| | | | ||| | || || || ||||| || | Sbjct 595 GCTTTTCTGATAAAGCCCAGCCCACCACTCTGCGTGCATAGAGATCCAGGACAACTGCCA 654 Query 39562 GGTACGCCCAGCGCTTACCC---GTCCAGATATAGGTCACATCACCGCACCACACCTGAT 39618 | || ||| || ||| | ||| | || || | || || ||||| ||||||| Sbjct 655 GATAGTGCCA---TTTGCCCTGTGCCCAAACGTAAGTGATGTCGCCACACCAGACCTGAT 711 Query 39619 TTGGC 39623 ||||| Sbjct 712 TTGGC 716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132586574708940