Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_021857.1
Length=41475
Score E
Sequences producing significant alignments: (Bits) Value
seq5893 86.0 2e-12
>seq5893
Length=2160
Score = 86.0 bits (94), Expect = 2e-12
Identities = 205/305 (67%), Gaps = 9/305 (3%)
Strand=Plus/Plus
Query 39323 TTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATAAC 39382
|||||||||||||| || || |||||||| ||||| | || |||| ||||||| | |
Sbjct 417 TTATCCCAGCAGTTGCCTCGGCGGCTCATGCTCTGGCGCATGCGGTAGCGCCACAGTCTC 476
Query 39383 TGCCCGGAACTGCCTGCTCGTATAATGACTGCCCTGATCGCTGTGGAACATCACCCCGCC 39442
|| |||||||| | || ||| || ||||| ||| ||| |||| || |||
Sbjct 477 TG-GCGGAACTGACGACTGCCATATTGCGATCCCTGGTCGGAGTGAAACAGCAGCCCTTG 535
Query 39443 GGGCTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGA-GCCTGCTGTCCG 39501
||||| ||||| ||| | |||| ||||||||||| | || | |||| || ||
Sbjct 536 AGGCTTTCCACGTTGTTCGTAAGCCACGTCCAGCGCTTTGACCACGAGGTCTGC-GTTCG 594
Query 39502 GCGAGAACGACATGGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGA 39561
|| || | ||||||||||| | | | ||| | || || || ||||| || |
Sbjct 595 GCTTTTCTGATAAAGCCCAGCCCACCACTCTGCGTGCATAGAGATCCAGGACAACTGCCA 654
Query 39562 GGTACGCCCAGCGCTTACCC---GTCCAGATATAGGTCACATCACCGCACCACACCTGAT 39618
| || ||| || ||| | ||| | || || | || || ||||| |||||||
Sbjct 655 GATAGTGCCA---TTTGCCCTGTGCCCAAACGTAAGTGATGTCGCCACACCAGACCTGAT 711
Query 39619 TTGGC 39623
|||||
Sbjct 712 TTGGC 716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132586574708940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |