Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq7237 163 3e-34 seq4842 158 1e-32 seq1619 147 3e-29 seq2592 120 4e-21 seq2925 100 3e-15 seq7501 98.7 1e-14 seq6320 98.7 1e-14 >seq7237 Length=102105 Score = 163 bits (180), Expect = 3e-34 Identities = 330/488 (68%), Gaps = 15/488 (3%) Strand=Plus/Plus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 |||||||||||||| || |||| ||| |||| || ||||| || | ||| |||||||| Sbjct 85900 TGGTCGACGTAGCGAGCGGTGTTGTTGTAGACCCGCAGCATAGGAATGAGTCCGTTGGAG 85959 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 ||||||||| || || | | | |||| ||| || | ||| | | |||| Sbjct 85960 GTGCCGTTGGTCCCAGCGATGAGAGTTCCGGAGGCTCGAATGCAGTGGACATTGAGGCCG 86019 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 || |||||||| ||||||||||| || |||||||| ||| || | | ||||||| ||| Sbjct 86020 ATTCCGCCGGCGGACTTGGAGATCAGAGCGCACTGCCAGAGGGTCTTGAAGATGCCGTCG 86079 Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305 || |||||| | ||||| | || ||||| || | || || | |||||| Sbjct 86080 ATGGAGTCGTCACTCATGGTGAGCAGGAAGCAGGAGCTCATCTGGGGCTTGCAGGTGCCG 86139 Query 1630306 GCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGTG 1630365 |||||||||||||| |||| || ||||||| || || |||||| || |||||| Sbjct 86140 GCGTTGAAGAGCGTCGGCGAGGCATGGGTGAACCACCGCTCGGACATGAGGTTGTAGGTT 86199 Query 1630366 GCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGACG 1630425 ||| || ||| | || ||| || | || |||| ||| ||| Sbjct 86200 TCGATGGCG-GCGTTGATG--TCTTCCTTGTGG--------AT----TCCGACGGCCACG 86244 Query 1630426 CGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGGAC 1630485 ||||| ||||| | ||||| || || ||||| ||| | |||| |||||||| Sbjct 86245 CGCATCAGCATATGTTGGGGTCGTTCCACGACCTTCCCGTCGATCTTGAGGAGGTAGGAG 86304 Query 1630486 CGGCGCATGGTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGTGGCGGATGGCG 1630545 || || |||| ||| ||| ||||||| || || |||||||||| | |||||| Sbjct 86305 CGCTCCAGGGTCTTGAAGCCGAAGTAGGTGTAGTTGAAGTCGCGGTCGTAGACGATGGCC 86364 Query 1630546 GCGTCGAG 1630553 | || ||| Sbjct 86365 GAGTTGAG 86372 Score = 140 bits (154), Expect = 4e-27 Identities = 137/177 (77%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 1628112 CAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTCCGTGGGCGACGAAAACTGGACGAT 1628171 |||||| ||| || |||||||| || ||||| ||||| || |||||||||| Sbjct 85315 CAGGGCGACGGAGGCCAGGTTGCACACGGCTACTTCTTCAGGCGAAGAGTACTGGACGAT 85374 Query 1628172 CTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTCAGGTT 1628231 ||||||||| ||||||| || | |||| || ||||||| |||||||| || |||| Sbjct 85375 CTCGGTGCAGAGGTTGGAGCACTTGATCGTCCCGAGGTTCTTCTGGTTGGACTTCTGGTT 85434 Query 1628232 GACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACGAT 1628288 | ||||||||||| ||||||||| || | |||||| |||||||||| || |||||| Sbjct 85435 GCAGGCGTCCTTGTAGAGCATGTAAGGAGTGCCGGTTTCGATCTGCGACGTGACGAT 85491 Score = 96.9 bits (106), Expect = 4e-14 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 1627348 AAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGACCTCGCACGCCTCG 1627407 |||||||| |||||||||||||| |||||||||| ||| ||| || |||| Sbjct 84749 AAGTCGCCAGAGAGCACGCGGCGACTGTAGATGTTCGACGTGTACGGCTCCATCGACTCG 84808 Query 1627408 GTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGGAGCGAGTTG 1627467 |||| || |||||||||| |||| ||||| |||||| ||||||| ||||| ||| Sbjct 84809 TTGTTTCCTAGGATCTGCGCTGTCGATGCCGTTGGCATGGGCGCCACCAGGAGACTGTTC 84868 Query 1627468 CGCAGGCCGTGCT 1627480 || | |||||||| Sbjct 84869 CGTACGCCGTGCT 84881 >seq4842 Length=3430 Score = 158 bits (174), Expect = 1e-32 Identities = 167/220 (76%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||||||| ||| | | ||| ||||| |||||||||||||||||||| | | || Sbjct 2849 GCTTGGCCAGTTCTCCGGGGAGGATGAGGCGGACGGCGGTCTGGATCTCGCGGGAGGAGA 2908 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||| ||||| |||| || || || ||||||| | ||||||| |||| | Sbjct 2909 TGGTGGAGCGTTTGTTGTAGTGGGCGAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 2968 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| |||| ||||||||| ||| |||| Sbjct 2969 CGTCGTTGACGAAGGAGTTCATGATGCTCATCGCCTTGGACGAGATGCCCGTGTCCGGGT 3028 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562 |||||||||| ||||| ||| | | || |||||| || Sbjct 3029 GCACCTGCTTCAGCACGCGGTACACGTACACCGAGTAGGA 3068 >seq1619 Length=706 Score = 147 bits (162), Expect = 3e-29 Identities = 241/345 (70%), Gaps = 2/345 (1%) Strand=Plus/Minus Query 92583 GTCGCCTCGCCGATGCACTCGGCGATCTGGCGCGTGAGGGCCTCCTGCACCTGGAAGCGG 92642 ||| ||||| | || |||||| | ||| || || ||| |||||| | ||| | ||| Sbjct 612 GTCACCTCGGCAATCGCCTCGGCCACCTGTCGTGTCAGGTTCTCCTGGATCTGCAGCCGG 553 Query 92643 TCGGAAAACATGTCGACGATGCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGTGGGC 92702 | ||||||||||| ||||||| | || ||| || | | | |||||||||| Sbjct 552 CGCGCGAACATGTCGACAATGCGCGCCACTTTCGACAGCCCCAGCACCTTGCCCGTGGGG 493 Query 92703 AGGTAGCCCACGTGGGCCTTGCCCATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAA 92762 | |||| | ||||| |||||||| || || |||||||| ||||||||||||| || | Sbjct 492 ATGTAGGCAACGTGCGCCTTGCCGATGAACGGCAGCAGGTGGTGCTCGCACAACGAATAC 433 Query 92763 AAGTCGACGTCGCGCACGATCACCATCTCGCCCGAGGCCTCGGCAAAGAGCGCGTCGCCG 92822 | |||| |||||| ||||||||||||||| | | || | | || || || || | Sbjct 432 AGCTCGATGTCGCGTACGATCACCATCTCGTCGTTGTCCGAGTCGAACAGTGCACCGTTG 373 Query 92823 ATGGCCTCGGCCAGCGTCATGC-GGTGGCCGCGCGTGCGCTCCACCATGGCCTTGGCCAC 92881 | | || | || || ||| | | |||| | | | ||||||||||||| | Sbjct 372 ACGATCTGCTCTAGGCTC-TGCTGATAGCCGTGACACAGGTATTGCATGGCCTTGGCCGC 314 Query 92882 GCGCATCGGCGTGTCCAGGAGGCCCTCGCGCCGCACGTCCTCGCC 92926 ||| | ||||||||||| ||||| |||||| || || |||||| Sbjct 313 ACGCTTGGGCGTGTCCAGCAGGCCTTCGCGCTGCGGGTTCTCGCC 269 >seq2592 Length=18905 Score = 120 bits (132), Expect = 4e-21 Identities = 186/261 (71%), Gaps = 11/261 (4%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 |||||||| || ||| | ||||||||| || |||||||||||| |||||||||||| Sbjct 15069 CCTTCGTCCCGGGAGATGAGTTCGTTGCTGTGGGTGAGGCCGGGCATCAGGCCGCGCTTC 15128 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| ||||||||| ||| || ||||| |||||||| || |||||||| ||| Sbjct 15129 TTGAGCCAGAAGATGGCGGCGAAGGATCCGGAGAAGAAGATGCCTTCCACGGCGGCGAAG 15188 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGCC 869356 |||| | || | ||| |||| | | ||||| |||||| || ||| Sbjct 15189 GCGATCACGCGGGTTCCGAAG-----GAGG-CGTTCTTGTCGCCGATCCAGCGCAGTGCC 15242 Query 869357 CAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAG-GTGGTCCTT 869415 ||||||||||| ||| | | |||| | | | |||||| ||||| ||| ||| | Sbjct 15243 CAGTCGGCCTTCTTCTTGATGCACGGGAACTCTTGTATGGCGTTGAAGAGCGTGTTCCGT 15302 Query 869416 TTCGGCCGGGTCCTTGACATA 869436 | | | |||||| |||| || Sbjct 15303 TCCCG-GGGGTCCGTGACGTA 15322 Score = 91.5 bits (100), Expect = 2e-12 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || ||| ||||||| || |||| ||||||||| |||| |||| | |||||||||||| Sbjct 14874 AGTAGGTGGTCGGCCACGTACTCTATGTACTGGGACATTAGGCGGCAGTTCATGCCGATC 14933 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 | |||| || || | || ||| |||| | |||||||| |||||||||| |||| Sbjct 14934 ATGTCCACGGGTAGGGCTTCTGTCAGGTACTCCTGCTCGATCTGGACGGCCTCGCGGATG 14993 Query 868931 ATCTGCCTGGGC-ACGTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGC 868989 |||| || | | || | | ||||||| | | || | |||| | |||||||| Sbjct 14994 ATCTCGTTGACCTGCTTCTGGC-TGGGCTTGCTCTCCAGGTACTTGTACATGAGGCAGGC 15052 Query 868990 AAAGTCGCAGTG 869001 ||||||| ||| Sbjct 15053 GAAGTCGCGGTG 15064 >seq2925 Length=137875 Score = 100 bits (110), Expect = 3e-15 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||||||| | |||||| | || ||||| | ||||||| | ||||||||| Sbjct 99435 GCCGCCAACTACTTGGACATCCGGGGACTTCTCGACGTGACGTGCAAGACGGTGGCCAAC 99376 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||| ||||| || | || || ||||||||||||||||| ||||||||| ||| Sbjct 99375 ATGATTAAGGGTAAAACTCCGGAAGAGATCCGCAAGACCTTCAACATCAAGAACG 99321 >seq7501 Length=6922 Score = 98.7 bits (108), Expect = 1e-14 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 || ||||| || | | ||| ||||| |||||||||||||| ||||| | |||||| Sbjct 156 GCGAGTTCACCAGGGAGGATGAGGCGGACGGCGGTCTGGATTTCGCGGGACGAGATCGTC 97 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 ||||||||| |||| || || || ||| ||| | ||||||| |||| | |||| Sbjct 96 GAGCGCTTGTTGTAGTGTGCGAGGCGCGAGGCTTCGCCGGCGATGCGCTCGAATACGTCG 37 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTT 1254499 ||||| || |||||||||| ||||| | ||| Sbjct 36 TTGACGAAGGAGTTCATGATAGACATGGCCTT 5 >seq6320 Length=115745 Score = 98.7 bits (108), Expect = 1e-14 Identities = 155/221 (70%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 1573968 GAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATC 1574027 || ||||| || ||||| |||||||||||||| || || |||||||||| || || | Sbjct 79917 GACGCCGTCCTGGAACTGAACGCGTCGGACGATCGTGGAATCGACGTCGTCCGTAACAAG 79858 Query 1574028 ATCAAGCACCACGCCTCCAAGAGGA---TCGACCTGCCGCCCGGACGCCACAAGGTGATC 1574084 |||||| || || | |||| | || |||||| || |||||| | ||| Sbjct 79857 ATCAAGAACTTCG---CGCAGAGCAAAGTCACCCTGCCCAATGGGATGCACAAGATCATC 79801 Query 1574085 ATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATG 1574144 ||||| |||||||| ||| || | || | || ||||| ||||||||| |||||| Sbjct 79800 ATCCTGGACGAGGCGGACAGCATGACCGAAGGAGCGCAGCAAGCCCTGCGGAGGACCATG 79741 Query 1574145 GAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAA 1574185 || ||| || || || ||||| ||||| || ||||| Sbjct 79740 GAGGTCTACAGTAAGACCACCCGCTTCGCCCTCGCCTGCAA 79700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106522894230670