Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq7237 163 3e-34
seq4842 158 1e-32
seq1619 147 3e-29
seq2592 120 4e-21
seq2925 100 3e-15
seq7501 98.7 1e-14
seq6320 98.7 1e-14
>seq7237
Length=102105
Score = 163 bits (180), Expect = 3e-34
Identities = 330/488 (68%), Gaps = 15/488 (3%)
Strand=Plus/Plus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
|||||||||||||| || |||| ||| |||| || ||||| || | ||| ||||||||
Sbjct 85900 TGGTCGACGTAGCGAGCGGTGTTGTTGTAGACCCGCAGCATAGGAATGAGTCCGTTGGAG 85959
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185
||||||||| || || | | | |||| ||| || | ||| | | ||||
Sbjct 85960 GTGCCGTTGGTCCCAGCGATGAGAGTTCCGGAGGCTCGAATGCAGTGGACATTGAGGCCG 86019
Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245
|| |||||||| ||||||||||| || |||||||| ||| || | | ||||||| |||
Sbjct 86020 ATTCCGCCGGCGGACTTGGAGATCAGAGCGCACTGCCAGAGGGTCTTGAAGATGCCGTCG 86079
Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305
|| |||||| | ||||| | || ||||| || | || || | ||||||
Sbjct 86080 ATGGAGTCGTCACTCATGGTGAGCAGGAAGCAGGAGCTCATCTGGGGCTTGCAGGTGCCG 86139
Query 1630306 GCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGTG 1630365
|||||||||||||| |||| || ||||||| || || |||||| || ||||||
Sbjct 86140 GCGTTGAAGAGCGTCGGCGAGGCATGGGTGAACCACCGCTCGGACATGAGGTTGTAGGTT 86199
Query 1630366 GCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGACG 1630425
||| || ||| | || ||| || | || |||| ||| |||
Sbjct 86200 TCGATGGCG-GCGTTGATG--TCTTCCTTGTGG--------AT----TCCGACGGCCACG 86244
Query 1630426 CGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGGAC 1630485
||||| ||||| | ||||| || || ||||| ||| | |||| ||||||||
Sbjct 86245 CGCATCAGCATATGTTGGGGTCGTTCCACGACCTTCCCGTCGATCTTGAGGAGGTAGGAG 86304
Query 1630486 CGGCGCATGGTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGTGGCGGATGGCG 1630545
|| || |||| ||| ||| ||||||| || || |||||||||| | ||||||
Sbjct 86305 CGCTCCAGGGTCTTGAAGCCGAAGTAGGTGTAGTTGAAGTCGCGGTCGTAGACGATGGCC 86364
Query 1630546 GCGTCGAG 1630553
| || |||
Sbjct 86365 GAGTTGAG 86372
Score = 140 bits (154), Expect = 4e-27
Identities = 137/177 (77%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 1628112 CAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTCCGTGGGCGACGAAAACTGGACGAT 1628171
|||||| ||| || |||||||| || ||||| ||||| || ||||||||||
Sbjct 85315 CAGGGCGACGGAGGCCAGGTTGCACACGGCTACTTCTTCAGGCGAAGAGTACTGGACGAT 85374
Query 1628172 CTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTCAGGTT 1628231
||||||||| ||||||| || | |||| || ||||||| |||||||| || ||||
Sbjct 85375 CTCGGTGCAGAGGTTGGAGCACTTGATCGTCCCGAGGTTCTTCTGGTTGGACTTCTGGTT 85434
Query 1628232 GACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACGAT 1628288
| ||||||||||| ||||||||| || | |||||| |||||||||| || ||||||
Sbjct 85435 GCAGGCGTCCTTGTAGAGCATGTAAGGAGTGCCGGTTTCGATCTGCGACGTGACGAT 85491
Score = 96.9 bits (106), Expect = 4e-14
Identities = 101/133 (76%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 1627348 AAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGACCTCGCACGCCTCG 1627407
|||||||| |||||||||||||| |||||||||| ||| ||| || ||||
Sbjct 84749 AAGTCGCCAGAGAGCACGCGGCGACTGTAGATGTTCGACGTGTACGGCTCCATCGACTCG 84808
Query 1627408 GTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGGAGCGAGTTG 1627467
|||| || |||||||||| |||| ||||| |||||| ||||||| ||||| |||
Sbjct 84809 TTGTTTCCTAGGATCTGCGCTGTCGATGCCGTTGGCATGGGCGCCACCAGGAGACTGTTC 84868
Query 1627468 CGCAGGCCGTGCT 1627480
|| | ||||||||
Sbjct 84869 CGTACGCCGTGCT 84881
>seq4842
Length=3430
Score = 158 bits (174), Expect = 1e-32
Identities = 167/220 (76%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||||||||| ||| | | ||| ||||| |||||||||||||||||||| | | ||
Sbjct 2849 GCTTGGCCAGTTCTCCGGGGAGGATGAGGCGGACGGCGGTCTGGATCTCGCGGGAGGAGA 2908
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||| ||||| |||| || || || ||||||| | ||||||| |||| |
Sbjct 2909 TGGTGGAGCGTTTGTTGTAGTGGGCGAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 2968
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||||| || |||||||||| ||||| |||| ||||||||| ||| ||||
Sbjct 2969 CGTCGTTGACGAAGGAGTTCATGATGCTCATCGCCTTGGACGAGATGCCCGTGTCCGGGT 3028
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562
|||||||||| ||||| ||| | | || |||||| ||
Sbjct 3029 GCACCTGCTTCAGCACGCGGTACACGTACACCGAGTAGGA 3068
>seq1619
Length=706
Score = 147 bits (162), Expect = 3e-29
Identities = 241/345 (70%), Gaps = 2/345 (1%)
Strand=Plus/Minus
Query 92583 GTCGCCTCGCCGATGCACTCGGCGATCTGGCGCGTGAGGGCCTCCTGCACCTGGAAGCGG 92642
||| ||||| | || |||||| | ||| || || ||| |||||| | ||| | |||
Sbjct 612 GTCACCTCGGCAATCGCCTCGGCCACCTGTCGTGTCAGGTTCTCCTGGATCTGCAGCCGG 553
Query 92643 TCGGAAAACATGTCGACGATGCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGTGGGC 92702
| ||||||||||| ||||||| | || ||| || | | | ||||||||||
Sbjct 552 CGCGCGAACATGTCGACAATGCGCGCCACTTTCGACAGCCCCAGCACCTTGCCCGTGGGG 493
Query 92703 AGGTAGCCCACGTGGGCCTTGCCCATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAA 92762
| |||| | ||||| |||||||| || || |||||||| ||||||||||||| || |
Sbjct 492 ATGTAGGCAACGTGCGCCTTGCCGATGAACGGCAGCAGGTGGTGCTCGCACAACGAATAC 433
Query 92763 AAGTCGACGTCGCGCACGATCACCATCTCGCCCGAGGCCTCGGCAAAGAGCGCGTCGCCG 92822
| |||| |||||| ||||||||||||||| | | || | | || || || || |
Sbjct 432 AGCTCGATGTCGCGTACGATCACCATCTCGTCGTTGTCCGAGTCGAACAGTGCACCGTTG 373
Query 92823 ATGGCCTCGGCCAGCGTCATGC-GGTGGCCGCGCGTGCGCTCCACCATGGCCTTGGCCAC 92881
| | || | || || ||| | | |||| | | | ||||||||||||| |
Sbjct 372 ACGATCTGCTCTAGGCTC-TGCTGATAGCCGTGACACAGGTATTGCATGGCCTTGGCCGC 314
Query 92882 GCGCATCGGCGTGTCCAGGAGGCCCTCGCGCCGCACGTCCTCGCC 92926
||| | ||||||||||| ||||| |||||| || || ||||||
Sbjct 313 ACGCTTGGGCGTGTCCAGCAGGCCTTCGCGCTGCGGGTTCTCGCC 269
>seq2592
Length=18905
Score = 120 bits (132), Expect = 4e-21
Identities = 186/261 (71%), Gaps = 11/261 (4%)
Strand=Plus/Plus
Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239
|||||||| || ||| | ||||||||| || |||||||||||| ||||||||||||
Sbjct 15069 CCTTCGTCCCGGGAGATGAGTTCGTTGCTGTGGGTGAGGCCGGGCATCAGGCCGCGCTTC 15128
Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299
|||||||| ||||||||| ||| || ||||| |||||||| || |||||||| |||
Sbjct 15129 TTGAGCCAGAAGATGGCGGCGAAGGATCCGGAGAAGAAGATGCCTTCCACGGCGGCGAAG 15188
Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGCC 869356
|||| | || | ||| |||| | | ||||| |||||| || |||
Sbjct 15189 GCGATCACGCGGGTTCCGAAG-----GAGG-CGTTCTTGTCGCCGATCCAGCGCAGTGCC 15242
Query 869357 CAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAG-GTGGTCCTT 869415
||||||||||| ||| | | |||| | | | |||||| ||||| ||| ||| |
Sbjct 15243 CAGTCGGCCTTCTTCTTGATGCACGGGAACTCTTGTATGGCGTTGAAGAGCGTGTTCCGT 15302
Query 869416 TTCGGCCGGGTCCTTGACATA 869436
| | | |||||| |||| ||
Sbjct 15303 TCCCG-GGGGTCCGTGACGTA 15322
Score = 91.5 bits (100), Expect = 2e-12
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
|| ||| ||||||| || |||| ||||||||| |||| |||| | ||||||||||||
Sbjct 14874 AGTAGGTGGTCGGCCACGTACTCTATGTACTGGGACATTAGGCGGCAGTTCATGCCGATC 14933
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
| |||| || || | || ||| |||| | |||||||| |||||||||| ||||
Sbjct 14934 ATGTCCACGGGTAGGGCTTCTGTCAGGTACTCCTGCTCGATCTGGACGGCCTCGCGGATG 14993
Query 868931 ATCTGCCTGGGC-ACGTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGC 868989
|||| || | | || | | ||||||| | | || | |||| | ||||||||
Sbjct 14994 ATCTCGTTGACCTGCTTCTGGC-TGGGCTTGCTCTCCAGGTACTTGTACATGAGGCAGGC 15052
Query 868990 AAAGTCGCAGTG 869001
||||||| |||
Sbjct 15053 GAAGTCGCGGTG 15064
>seq2925
Length=137875
Score = 100 bits (110), Expect = 3e-15
Identities = 91/115 (79%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|||||||||||| | |||||| | || ||||| | ||||||| | |||||||||
Sbjct 99435 GCCGCCAACTACTTGGACATCCGGGGACTTCTCGACGTGACGTGCAAGACGGTGGCCAAC 99376
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300
||||| ||||| || | || || ||||||||||||||||| ||||||||| |||
Sbjct 99375 ATGATTAAGGGTAAAACTCCGGAAGAGATCCGCAAGACCTTCAACATCAAGAACG 99321
>seq7501
Length=6922
Score = 98.7 bits (108), Expect = 1e-14
Identities = 113/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407
|| ||||| || | | ||| ||||| |||||||||||||| ||||| | ||||||
Sbjct 156 GCGAGTTCACCAGGGAGGATGAGGCGGACGGCGGTCTGGATTTCGCGGGACGAGATCGTC 97
Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467
||||||||| |||| || || || ||| ||| | ||||||| |||| | ||||
Sbjct 96 GAGCGCTTGTTGTAGTGTGCGAGGCGCGAGGCTTCGCCGGCGATGCGCTCGAATACGTCG 37
Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTT 1254499
||||| || |||||||||| ||||| | |||
Sbjct 36 TTGACGAAGGAGTTCATGATAGACATGGCCTT 5
>seq6320
Length=115745
Score = 98.7 bits (108), Expect = 1e-14
Identities = 155/221 (70%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 1573968 GAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATC 1574027
|| ||||| || ||||| |||||||||||||| || || |||||||||| || || |
Sbjct 79917 GACGCCGTCCTGGAACTGAACGCGTCGGACGATCGTGGAATCGACGTCGTCCGTAACAAG 79858
Query 1574028 ATCAAGCACCACGCCTCCAAGAGGA---TCGACCTGCCGCCCGGACGCCACAAGGTGATC 1574084
|||||| || || | |||| | || |||||| || |||||| | |||
Sbjct 79857 ATCAAGAACTTCG---CGCAGAGCAAAGTCACCCTGCCCAATGGGATGCACAAGATCATC 79801
Query 1574085 ATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATG 1574144
||||| |||||||| ||| || | || | || ||||| ||||||||| ||||||
Sbjct 79800 ATCCTGGACGAGGCGGACAGCATGACCGAAGGAGCGCAGCAAGCCCTGCGGAGGACCATG 79741
Query 1574145 GAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAA 1574185
|| ||| || || || ||||| ||||| || |||||
Sbjct 79740 GAGGTCTACAGTAAGACCACCCGCTTCGCCCTCGCCTGCAA 79700
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106522894230670
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