Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq7223 187 2e-42 seq6916 131 1e-25 seq6089 114 1e-20 >seq7223 Length=30619 Score = 187 bits (206), Expect = 2e-42 Identities = 228/311 (73%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 || || |||||||| ||| | ||||| | || || ||||| || || |||||||| | | Sbjct 21668 GTTTCAGGGTTGTCGCATGCTGGACATAGAACGAATTTGCGAATAAATCCATCAAGAATG 21609 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 || || | |||| | ||||| |||||| || ||| | || ||||| ||| ||| Sbjct 21608 TCTTGGAGCTTATTCGCATCGTGTTCGCCGTTAACAATGTAGCGATCGTTCTTGGTGTCG 21549 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500 | | ||||||||| |||| || || ||||| || || |||||||| | | || || Sbjct 21548 ATGTTCGTTTGCGCACCCAATTCACATCCGAAATATTTAGTCGGGTAGGTTGGTGGGCGC 21489 Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560 | |||| ||| | || || ||||||| | || ||||| ||||||||||| |||||| Sbjct 21488 TCCAGCGACTTTCCAATCTCCACCATGTTGGCTATTACAGTTTTGATGCCGTTTCCCTTT 21429 Query 34561 CCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTG 34620 ||||||||||| || | |||||||| |||||||||||||| | ||| |||||| Sbjct 21428 CCTTCGACCTTCGCTTGAAGTCGCGGCATCTTGTAGCGGTAGAAGGGATCCAGAACATTG 21369 Query 34621 CGGTTAACGTT 34631 ||||| ||||| Sbjct 21368 CGGTTCACGTT 21358 >seq6916 Length=23635 Score = 131 bits (144), Expect = 1e-25 Identities = 220/313 (70%), Gaps = 4/313 (1%) Strand=Plus/Minus Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 ||||| || ||||||||| | ||||| | | || || ||||||||||||||||| | | Sbjct 8185 GTCTCAGGATTGTCACATGCTGGACATAGAATGAAATTACGGATGAAACCATCAAGAATG 8126 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT-TTTGTAATC 34439 || || | |||| | |||||| ||||| || ||| || |||| | ||| ||| Sbjct 8125 TCTTGGAGCTTATTCGCATCGTGGTCCCCGTTCACTATGTGGCGACCGTTCTCTGT-ATC 8067 Query 34440 GACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGAC- 34498 || | ||||| || |||| ||||| ||||| ||||| || | || | |||| Sbjct 8066 GATTTTTGTTTGAGCTCCCAATTCGCAACCGAAATACTTAGTAAGATATGCAGGTGGACG 8007 Query 34499 GTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCT 34558 ||||||| | ||| | || || ||||||| | || ||||| ||||| ||||| |||| Sbjct 8006 GTCCAAG-GACTTTCCAATCTCCACCATGTTGGCTATAACAGTTTTGATACCGTTTCCCT 7948 Query 34559 TTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACAT 34618 ||||||| | ||| || | || ||||| ||||| || ||||| | ||| |||| Sbjct 7947 TTCCTTCTATCTTTGCTTGAAGTCGAGGCATCTTGTAACGATAGAAGGGATCCAGAACAT 7888 Query 34619 TGCGGTTAACGTT 34631 || || ||||| Sbjct 7887 GACGATTCACGTT 7875 >seq6089 Length=24741 Score = 114 bits (126), Expect = 1e-20 Identities = 212/311 (68%), Gaps = 0/311 (0%) Strand=Plus/Plus Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 ||||| |||||||| ||| | ||||| | || || || || |||||||||||||| | | Sbjct 8566 GTCTCAGGGTTGTCGCATACTGGACATAGAACGAATTTACGAATGAAACCATCAAGAATG 8625 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 | || | |||| | ||||| |||||| || ||| | || || || | | |||| Sbjct 8626 CCTTGGAGCTTATTCGCATCGTGTTCGCCGTTTACAATGTAGCGGTCATTCTCGGTATCG 8685 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500 | | ||||| || |||| ||||| ||||| ||||| || | || | | | || Sbjct 8686 ATGTTTGTTTGAGCTCCCAATTCGCAGCCGAAATACTTAGTAAGATACGTTGGTGAGCGA 8745 Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560 |||| | | | | || || ||||||| | || ||||| || || ||||| || ||| Sbjct 8746 TCAAGAGACGTTCCAATCTCCACCATGTTGGCTATTACAGTTTTAATACCGTTTCCTTTT 8805 Query 34561 CCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTG 34620 ||||||| | | | | || ||||| ||||| || ||||| | ||| |||| Sbjct 8806 CCTTCGATCCTTACTTGAAGTCGAGGCATCTTGTAACGATAGAAGGGATCCAAAACATGA 8865 Query 34621 CGGTTAACGTT 34631 ||||| ||||| Sbjct 8866 CGGTTCACGTT 8876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412803813382430