Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq4842 219 7e-51 seq7501 165 1e-34 seq1619 161 2e-33 seq7237 136 6e-26 seq6232 116 6e-20 seq2592 107 3e-17 seq2925 95.1 2e-13 seq5306 86.0 1e-10 seq3793 86.0 1e-10 >seq4842 Length=3430 Score = 219 bits (242), Expect = 7e-51 Identities = 192/237 (81%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| |||||||||| ||| | | Sbjct 2810 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGTTCTCCGGGGA 2869 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 ||| ||||| |||||||||||||||||||||| | ||| ||| ||| |||| |||| Sbjct 2870 GGATGAGGCGGACGGCGGTCTGGATCTCGCGGGAGGAGATGGTGGAGCGTTTGTTGTAGT 2929 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| ||||| ||||||| | ||||||| |||| | ||||||||| || ||||| Sbjct 2930 GGGCG--AGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGACGTCGTTGACGAAGGAGTT 2987 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||||| ||||| ||| ||||||||| ||| |||||||||||||| ||||| Sbjct 2988 CATGATGCTCATCGCCTTGGACGAGATGCCCGTGTCCGGGTGCACCTGCTTCAGCAC 3044 >seq7501 Length=6922 Score = 165 bits (182), Expect = 1e-34 Identities = 153/192 (80%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| | || ||||| || | | Sbjct 200 TGTACTTGGTGACGGCCTTGGTTCCCTCGGAGACGGCGTGCTTCGCGAGTTCACCAGGGA 141 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587 ||| ||||| |||||||||||||| ||||||| |||||| ||||||||| ||| Sbjct 140 GGATGAGGCGGACGGCGGTCTGGATTTCGCGGGACGAGATCGTCGAGCGCTTGTTGTAGT 81 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| ||||| ||| ||| | ||||||| |||| | ||||||||| || ||||| Sbjct 80 GTGCG--AGGCGCGAGGCTTCGCCGGCGATGCGCTCGAATACGTCGTTGACGAAGGAGTT 23 Query 1485648 CATGATCGACAT 1485659 |||||| ||||| Sbjct 22 CATGATAGACAT 11 >seq1619 Length=706 Score = 161 bits (178), Expect = 2e-33 Identities = 282/408 (69%), Gaps = 2/408 (0%) Strand=Plus/Minus Query 118626 ACGCCGCGCATGCACACGCACATGTGGAGGCCCTCGAGCACGACGCCGACGCCGCGCGCG 118685 || |||||||| || ||||||||| | |||||| ||| || | |||||| || Sbjct 675 ACCCCGCGCATCATCATGCACATGTGCTTGGCCTCGATCACCACTGCCACGCCGGCGGCA 616 Query 118686 CCCGTGACCTCGCTGATGCTCTCGGCGATCTGGCGCGTGAGCGCCTCCTGCACCTGGAAG 118745 || |||||| || |||||| | ||| || || || |||||| | ||| | Sbjct 615 TGGGTCACCTCGGCAATCGCCTCGGCCACCTGTCGTGTCAGGTTCTCCTGGATCTGCAGC 556 Query 118746 CGGTCCGAGAGCATGTCGACGATGCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGCG 118805 ||| || || ||||||||| ||||||| | || ||| || | | | |||||| | Sbjct 555 CGGCGCGCGAACATGTCGACAATGCGCGCCACTTTCGACAGCCCCAGCACCTTGCCCGTG 496 Query 118806 GGCAGGTAGCCCACGTGCGCCTTGCCGATAAAGGGCAGCAGATGGTGCTCGCACATGGAG 118865 || | |||| | ||||||||||||||||| || |||||||| ||||||||||||| || Sbjct 495 GGGATGTAGGCAACGTGCGCCTTGCCGATGAACGGCAGCAGGTGGTGCTCGCACAACGAA 436 Query 118866 AAAAAGTCAATGTCGCGCACGGTCACCATCTCGCCCGACGT-CTCGGCAAAGAGGGCGTC 118924 | | || |||||||| ||| ||||||||||| || || | | | || || || | Sbjct 435 TACAGCTCGATGTCGCGTACGATCACCATCTCG-TCGTTGTCCGAGTCGAACAGTGCACC 377 Query 118925 GCCGACGGCCTCGGCCAGGGTCAGGCGGTGGCCGCGCGTGCGCTCCACCATGGCCTTGGC 118984 | |||| || | ||| || | | | |||| | | | |||||||||||| Sbjct 376 GTTGACGATCTGCTCTAGGCTCTGCTGATAGCCGTGACACAGGTATTGCATGGCCTTGGC 317 Query 118985 CACGCGCATGGGCGTGTCCAAGAGGCCCTCGCGCGCCACGTCCTCGCC 119032 | | ||| |||||||||||| ||||| |||||| | || |||||| Sbjct 316 CGCACGCTTGGGCGTGTCCAGCAGGCCTTCGCGCTGCGGGTTCTCGCC 269 >seq7237 Length=102105 Score = 136 bits (150), Expect = 6e-26 Identities = 328/494 (66%), Gaps = 27/494 (5%) Strand=Plus/Plus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 |||||||| ||||| || |||| ||| |||| || ||||| || | || |||||||| Sbjct 85900 TGGTCGACGTAGCGAGCGGTGTTGTTGTAGACCCGCAGCATAGGAATGAGTCCGTTGGAG 85959 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 ||||||||| || || | | | || ||||| || | ||| | | |||| Sbjct 85960 GTGCCGTTGGTCCCAGCGATGAGAGTTCCGGAGGCTCGAATGCAGTGGACATTGAGGCCG 86019 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || |||||||| | ||||||||| || ||||||| || |||| | ||||||| ||| Sbjct 86020 ATTCCGCCGGCGGACTTGGAGATCAGAGCGCACTGCCAGAGGGTCTTGAAGATGCCGTCG 86079 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCG-TGCC 2073779 || |||||| | ||||| | ||| ||||| || | || |||| || | |||| Sbjct 86080 ATGGAGTCGTCACTCATGGTGAGCAGGAAGCAGGAGCTCATCTG-GGGCTTGCAGGTGCC 86138 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839 ||| ||||||||||| |||| || ||| || || | | ||||||| | |||||| Sbjct 86139 GGCGTTGAAGAGCGTCGGCGAGGCATGGGTGAACCACCGCTCGGACATGAGGTTGTAGGT 86198 Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGG---CCGATGGC 2073896 || | ||| | | || ||| | | |||| |||| ||| Sbjct 86199 TTCG------------ATGGCGGCGTTGATGTC------TTCCTTGTGGATTCCGACGGC 86240 Query 2073897 GACGCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCG--CACCTTGGTCAGG 2073954 |||||||| | ||| | |||||||| || ||||| | || || | |||| ||| Sbjct 86241 CACGCGCATCAGCATATGTTGGGGTCGTTCCACGAC--CTTCCCGTCGATCTTGAGGAGG 86298 Query 2073955 TAGGACCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGG 2074014 ||||| || ||||||| | ||| ||||| | |||| | |||||| |||| | | Sbjct 86299 TAGGAGCGCTCCAGGGTCTTGAAGCCGAAGTAGGTGTAGTTGAAGTCGCGGTCGTAGACG 86358 Query 2074015 ATGGCGGCGTCGAG 2074028 ||||| | || ||| Sbjct 86359 ATGGCCGAGTTGAG 86372 Score = 111 bits (122), Expect = 2e-18 Identities = 122/162 (75%), Gaps = 4/162 (2%) Strand=Plus/Plus Query 2071564 GGCGACGAAAACTGGACGACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTC 2071623 ||||| || ||||||||| ||||||||| ||||||| || | | || || |||||| Sbjct 85355 GGCGAAGAGTACTGGACGATCTCGGTGCAGAGGTTGGAGCACTTGATCGTCCCGAGGTTC 85414 Query 2071624 TGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCG 2071683 | ||||||| || ||||| ||||||||||| |||||||| || | || || ||| Sbjct 85415 TTCTGGTTGGACTTCTGGTTGCAGGCGTCCTTGTAGAGCATGTAAGGAGTGCCGGTTTCG 85474 Query 2071684 ATCTGCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGC 2071725 ||||||| ||||||||| || ||||| | |||||||| Sbjct 85475 ATCTGCGACGTGACGATCTCCTCCCAAA----GGGCGCGGGC 85512 Score = 98.7 bits (108), Expect = 2e-14 Identities = 124/168 (74%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 2069617 AAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACCTCGCACGCCTCG 2069676 |||||||| |||||||||||||| |||||||||| |||| ||| || |||| Sbjct 84749 AAGTCGCCAGAGAGCACGCGGCGACTGTAGATGTTCGACGTGTACGGCTCCATCGACTCG 84808 Query 2069677 GTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGCAGCGAGTTG 2069736 |||| || |||||||||| |||| ||||| |||||| ||||||| || || ||| Sbjct 84809 TTGTTTCCTAGGATCTGCGCTGTCGATGCCGTTGGCATGGGCGCCACCAGGAGACTGTTC 84868 Query 2069737 CGCAGGCCGTACTGTCGC-ACCAGCGCCCGCAGGGCGTCCCAGTCCCA 2069783 || | ||||| || |||| | | | || || ||| |||||||||| Sbjct 84869 CGTACGCCGTGCT-TCGCGATCTTCTCCTTGAGTGCGGCCCAGTCCCA 84915 >seq6232 Length=54526 Score = 116 bits (128), Expect = 6e-20 Identities = 132/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 118722 GTGAGCGCCTCCTGCACCTGGAAGCGGTCCGAGAGCATGTCGACGATGCGCGGGATCTTG 118781 ||||| |||||| ||||||| ||| || || ||| ||||||| ||| | | |||| Sbjct 29408 GTGAGACGCTCCTGGACCTGGAGACGGCGCGCGAACATCTCGACGACGCGGGCCAGCTTG 29467 Query 118782 CTCAGGCCGATGATCCTGCCCGCGGGCAGGTAGCCCACGTGCGCCTTGCCGATAAAGGGC 118841 |||| ||||| |||| | ||||| |||||| | |||| |||||||||| || ||| Sbjct 29468 CTCAAGCCGAGGATCTTCTTGTTGGGCAAGTAGCCGATGTGCACCTTGCCGATGAAAGGC 29527 Query 118842 AGCAGATGGTGCTCGCACATGGAGAAAAAGTCAATGTCGCGCACGGTCACCATCTCG 118898 | || || ||||| || | |||||| || || ||||||||||| ||||||||| Sbjct 29528 ACGAGGTGATGCTCACAGAGGGAGAAGAACTCGATGTCGCGCACAACGACCATCTCG 29584 >seq2592 Length=18905 Score = 107 bits (118), Expect = 3e-17 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 |||||||| || ||| | ||||||||| | |||||||||||| |||||||||||| Sbjct 15069 CCTTCGTCCCGGGAGATGAGTTCGTTGCTGTGGGTGAGGCCGGGCATCAGGCCGCGCTTC 15128 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| |||||||| ||| || ||||| |||||||| || |||||||| ||| Sbjct 15129 TTGAGCCAGAAGATGGCGGCGAAGGATCCGGAGAAGAAGATGCCTTCCACGGCGGCGAAG 15188 Query 794461 CCGA 794464 ||| Sbjct 15189 GCGA 15192 Score = 89.7 bits (98), Expect = 8e-12 Identities = 97/126 (77%), Gaps = 2/126 (2%) Strand=Plus/Plus Query 794018 AAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGC-GTTCATGCCGA 794076 ||| ||| ||||||| ||| | || ||||||||| |||| ||| |||| ||||||||||| Sbjct 14873 AAGTAGGTGGTCGGCCACGTACTCTATGTACTGGGACATTAGG-CGGCAGTTCATGCCGA 14931 Query 794077 TGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGA 794136 | | ||||||| || | || | | |||| | |||||||| |||||||||| || Sbjct 14932 TCATGTCCACGGGTAGGGCTTCTGTCAGGTACTCCTGCTCGATCTGGACGGCCTCGCGGA 14991 Query 794137 TGATCT 794142 |||||| Sbjct 14992 TGATCT 14997 >seq2925 Length=137875 Score = 95.1 bits (104), Expect = 2e-13 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 |||||||||||| | |||||| | || ||||| || ||||||||| ||||||||| Sbjct 99435 GCCGCCAACTACTTGGACATCCGGGGACTTCTCGACGTGACGTGCAAGACGGTGGCCAAC 99376 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | || ||||| || | || || || |||||||||||||| ||||||||| ||| Sbjct 99375 ATGATTAAGGGTAAAACTCCGGAAGAGATCCGCAAGACCTTCAACATCAAGAACG 99321 >seq5306 Length=61597 Score = 86.0 bits (94), Expect = 1e-10 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 1812783 TGCCTCGGTGGCGCAGTTGGCGGCGCGCCAATCCCATAAATTGGAGGTCGTGAGTTCGAT 1812842 ||||||||| ||||||| ||| ||||| || || ||||| || |||||||||||||||| Sbjct 50524 TGCCTCGGTAGCGCAGTAGGCAGCGCGTCAGTCTCATAATCTGAAGGTCGTGAGTTCGAT 50583 Query 1812843 CCTCACCCGAGG 1812854 ||||||||| || Sbjct 50584 CCTCACCCGGGG 50595 >seq3793 Length=125684 Score = 86.0 bits (94), Expect = 1e-10 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 1812783 TGCCTCGGTGGCGCAGTTGGCGGCGCGCCAATCCCATAAATTGGAGGTCGTGAGTTCGAT 1812842 ||||||||| ||||||| ||| ||||| || || ||||| || |||||||||||||||| Sbjct 95662 TGCCTCGGTAGCGCAGTAGGCAGCGCGTCAGTCTCATAATCTGAAGGTCGTGAGTTCGAT 95721 Query 1812843 CCTCACCCGAGG 1812854 ||||||||| || Sbjct 95722 CCTCACCCGGGG 95733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915447527046890