Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_022330.1 Length=76586 Score E Sequences producing significant alignments: (Bits) Value seq3919 192 3e-44 >seq3919 Length=626 Score = 192 bits (212), Expect = 3e-44 Identities = 291/412 (71%), Gaps = 19/412 (5%) Strand=Plus/Plus Query 66254 GCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGAC 66313 ||| | || || || ||||| | || | ||| | | ||||||| || ||| |||| ||| Sbjct 29 GCCCAGGCACAAAAAGCCGGCGCCACCTGCGCATTCGTCGACGCCGAACACGCCCTCGAC 88 Query 66314 CCCGAGTACGCCAAGGC--GCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGG 66371 |||||||||||| ||| ||| || || | ||||| |||| |||| ||||||| Sbjct 89 CCCGAGTACGCC--GGCAAGCTGGGCGTCAATGTCGACGACCTGCTGGTCTCGCAGCCGG 146 Query 66372 ACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGT------CAAGTCTGGCGAGC 66425 |||| || |||||||||||||| ||| ||| | || || ||| | | ||| Sbjct 147 ACACCGGTGAGCAGGCCCTGGAAATCACCGACATGCTGGTGCGCTCCAACGCCGTCGACG 206 Query 66426 TGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCG 66485 || |||||||| |||| |||||||||||||| || |||||| ||||||||| Sbjct 207 TGATCATCGTCG------ACTCCGTGGCGGCCCTGGTACCCAAGGCCGAGATCGAAGGCG 260 Query 66486 ACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGC 66545 | || || |||| ||||| |||||||| || ||||| ||||| ||||| |||||||| Sbjct 261 AAATGGGCGACATGCACGTGGGCCTGCAGGCTCGCCTGATGTCCCAGGCACTGCGCAAGA 320 Query 66546 TCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGA 66605 |||| |||| |||| | | ||||| ||| | ||| |||||||| | ||| || Sbjct 321 TCACCGGCAACATCAAGAACGCCAACTGCCTGGTGATCTTCATCAACCAGATCCGCATGA 380 Query 66606 AGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGC 66657 | |||||| || | | ||||| || |||||||| || || || || Sbjct 381 AAATCGGCGTGATGTTCGGCAGCCCG---GAAACCACCACCGGTGGTAACGC 429 Score = 82.4 bits (90), Expect = 4e-11 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 66709 GAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCT 66768 |||||||||||| || | ||||||| | ||||| || ||| |||||||||||||| | Sbjct 520 GAAGGAAGGCGACGAAGTGGTCGGCAGCGAAACCCGCGTCAAAATCGTCAAGAACAAGGT 579 Query 66769 GGCCCCGCCGCACCGCAACGCCGAGTTC 66796 ||| |||||| |||| | ||||||||| Sbjct 580 GGCGCCGCCGTTCCGCCAGGCCGAGTTC 607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244927980149170