Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq2066 141 6e-29
seq5063 127 1e-24
seq4834 114 8e-21
seq7156 86.0 4e-12
seq6645 82.4 5e-11
>seq2066
Length=2850
Score = 141 bits (156), Expect = 6e-29
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||||| |||| ||||||||| ||||| |||||||| ||| | || | ||
Sbjct 859 AGAACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGTCCGTCT 918
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||||||||||||||| || |||||||| ||| | || | |||||||||||
Sbjct 919 TCGAGCTGCTTTCCGGCGAAGATGAGGCGTTGCTGATCTGGGGGGATTCCCTCCTTGTCT 978
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || ||| ||||| || | || || |||
Sbjct 979 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCGGAGGCTTCGACTTCGAGAGTGATCGTC 1038
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || || |||||||| || ||||||||||||
Sbjct 1039 TTGCCGGTCAGGGTCTTCACGAAGATCTGCATG 1071
Score = 136 bits (150), Expect = 3e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | |||| ||||||||| ||||| |||||||| ||| |||| ||||
Sbjct 1943 AGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCC 2002
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||||||||||||||||| || || || ||| | || | || ||||||||
Sbjct 2003 TCGAGTTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGAATTCCTTCCTTGTCC 2062
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || ||| ||||| || | ||| || |||
Sbjct 2063 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCCGAGGCTTCGACTTCGAGGGTGATCGTC 2122
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| ||||| | |||||| || ||||||||||||
Sbjct 2123 TTGCCCGTCAAGGTCTTCACGAAGATCTGCATG 2155
Score = 125 bits (138), Expect = 5e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||||| || |||||||| ||||| |||||||| ||| | || | ||
Sbjct 1220 AGGACCAGGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGTCCGTCT 1279
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||||||||||||||| || |||||||| ||| | || | |||||||||||
Sbjct 1280 TCGAGCTGCTTTCCGGCGAAGATGAGGCGTTGCTGATCTGGGGGGATTCCCTCCTTGTCC 1339
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || ||||| || || | ||| || |||
Sbjct 1340 TGGATCTTGGCCTTGACGTTCTCGATGGTATCCGAAGCCTCCACTTCGAGGGTGATCGTC 1399
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || |||||||| || ||||| |||||
Sbjct 1400 TTGCCGGTCAGGGTCTTCACGAAGATTTGCAT 1431
Score = 118 bits (130), Expect = 7e-22
Identities = 154/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|||| ||| | |||| ||||||||| ||||| |||||||| || |||| |||| ||
Sbjct 2 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCG 61
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
|||||||||||||||||||| || || || || ||| | || | || |||||||| |
Sbjct 62 AGTTGCTTTCCGGCGAAGATGAGGCGCTGTTGATCTGGGGGAATGCCTTCCTTGTCTTGA 121
Query 34889 ATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCT 34946
|| || ||||| || || || | ||| || ||||| || | ||||| ||||
Sbjct 122 ATCTTCGCCTTGAC--ATTCTCAATGGTGTCAGAAGCTTCGACTTCGAGAGTTATCGTCT 179
Query 34947 TTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || || | |||||| || ||||| |||||
Sbjct 180 TGCCAGTCAAGGTCTTCACGAAGATTTGCAT 210
Score = 114 bits (126), Expect = 8e-21
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||||| || ||||| || ||||| |||||||| | |||| ||||
Sbjct 1448 AGAACCAGGTGAAGAGTCGATTCCTTTTGGATGTTGTAGTCCGACAATGTGCGGCCATCC 1507
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||||||||||||||| || || || || ||| | || | || ||||||||
Sbjct 1508 TCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGTTGATCTGGGGGAATGCCTTCCTTGTCC 1567
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || ||| ||||| || | ||| || |||
Sbjct 1568 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCCGAGGCTTCGACTTCGAGGGTGATCGTC 1627
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| ||||| | |||||| || ||||||||||||
Sbjct 1628 TTGCCCGTCAAGGTCTTCACGAAGATCTGCATG 1660
>seq5063
Length=4177
Score = 127 bits (140), Expect = 1e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||||| || |||||||| ||||| |||||||| ||| |||| ||||
Sbjct 2602 AGCACCAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCC 2661
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||||||||||||||||| || || || ||| | || | || ||||||||
Sbjct 2662 TCGAGTTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGAATTCCTTCCTTGTCC 2721
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || ||| ||||| || | ||| || |||
Sbjct 2722 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAGGCTTCGACTTCGAGGGTGATCGTC 2781
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || || |||||||| || ||||| ||||||
Sbjct 2782 TTGCCGGTCAGGGTCTTCACGAAGATTTGCATG 2814
Score = 125 bits (138), Expect = 5e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | ||| ||||||||| ||||| ||||| || || |||| ||||
Sbjct 2226 AGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCC 2285
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||||||||||||||||| || || || ||| | || | || || |||||
Sbjct 2286 TCGAGTTGCTTTCCGGCGAAGATCAAGCGCTGTTGATCTGGGGGAATTCCTTCTTTGTCC 2345
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | |||| || ||| ||||| || | ||| || |||
Sbjct 2346 TGGATCTTGGCCTTGACGTTCTCGATCGTGTCGGAGGCTTCGACTTCGAGGGTGATCGTC 2405
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || ||||| ||||| |||||||| |||||
Sbjct 2406 TTGCCGGTGAGAGTCTTCACAAAGATTTGCAT 2437
Score = 98.7 bits (108), Expect = 6e-16
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | |||| ||||||||| ||||| |||||||| ||| | || | ||
Sbjct 3169 AGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGTCCGTCT 3228
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||||||||| ||||| || |||||||||||| | || | || ||||||||
Sbjct 3229 TCGAGCTGCTTTCCGGCAAAGATGAGGCGTTGCTGGTCTGGGGGGATTCCTTCCTTGTC 3287
Score = 95.1 bits (104), Expect = 8e-15
Identities = 132/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||||| ||| ||||||||| ||||| ||||| || || ||||| | ||
Sbjct 1683 AGAACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGCCCGTCT 1742
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || || |||||||| || ||||| || | || | |||||||||||
Sbjct 1743 TCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCGGGTGGGATTCCCTCCTTGTCC 1802
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || || | | || | || ||| ||||| |||| || ||||||
Sbjct 1803 TGAATCTTGGCCTTCACATTTTCAATGGTGTCCGAGGCTTCGACTTCAAGAGTGATGGTC 1862
Query 34946 TTTCC 34950
|||||
Sbjct 1863 TTTCC 1867
Score = 93.3 bits (102), Expect = 3e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| ||| ||||||||| || || |||||||| || ||||| | ||
Sbjct 1913 AGGACGAGGTGAAGAGTGGACTCCTTCTGGATATTGTAGTCCGAGAGAGTGCGCCCGTCT 1972
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||||||||| ||||| || || ||||| || | || | |||||||||||
Sbjct 1973 TCGAGCTGCTTTCCGGCAAAGATGAGGCGCTGCTGATCGGGTGGGATTCCCTCCTTGTC 2031
>seq4834
Length=88581
Score = 114 bits (126), Expect = 8e-21
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | ||| ||||||||| ||||| ||||| |||| |||| | ||
Sbjct 22333 AGAACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGATAACGTGCGGCCGTCC 22392
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||||||||||||||| || ||||||||||| | || | || ||||| ||
Sbjct 22393 TCGAGCTGCTTTCCGGCGAAGATGAGGCGTTGCTGGTCCGGAGGGATGCCTTCCTTATCT 22452
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | || ||| ||||| |||| ||| || |||
Sbjct 22453 TGAATCTTCGCCTTCACGTTCTCGATAGTATCCGAGGCTTCGACTTCAAGGGTGATTGTC 22512
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || || || ||||| || ||||||||||||
Sbjct 22513 TTCCCGGTAAGCGTCTTCACGAAGATCTGCATG 22545
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | || ||||||||||||||| ||||| || || | || | ||
Sbjct 21128 AGGACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCTGAAAGAGTACGGCCGTCC 21187
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || || |||||||| ||||| || || || ||||| | || | || ||||| ||
Sbjct 21188 TCAAGCTGTTTTCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGGGATGCCTTCCTTATCT 21247
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | || || ||||| || | ||| ||||||
Sbjct 21248 TGAATCTTCGCCTTCACGTTCTCGATTGTGTCCGAAGCTTCGACTTCGAGGGTGATGGTC 21307
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||| ||||| ||||| |||||||| ||||||
Sbjct 21308 TTTCCGGTGAGCGTCTTGACAAAGATTTGCATG 21340
Score = 89.7 bits (98), Expect = 3e-13
Identities = 108/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 34833 GCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTT 34892
|||| |||||||||||||| || |||||||| | || | || |||||||| | || |
Sbjct 22922 GCTTACCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGAATCT 22981
Query 34893 TTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCG 34952
| |||||| | | || | || ||||| || |||| ||| ||||||||||| |
Sbjct 22982 TAGCCTTGACGTTTTCGATGGTGTCGGACGCCTCAACCTCAAGGGTGATGGTCTTTCCGG 23041
Query 34953 TGAGGGTCTTTACAAAGATCTGCATGA 34979
| || || || || |||||||||||||
Sbjct 23042 TAAGAGTTTTGACGAAGATCTGCATGA 23068
Score = 87.8 bits (96), Expect = 1e-12
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||||| ||| ||||||||| ||||| ||||| |||| |||| | ||
Sbjct 22561 AGGACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGATAAAGTGCGACCGTCC 22620
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGG 34861
|| || ||||||||||||||||| || |||||||||
Sbjct 22621 TCGAGCTGCTTTCCGGCGAAGATGAGGCGTTGCTGG 22656
>seq7156
Length=22399
Score = 86.0 bits (94), Expect = 4e-12
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 34838 CCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGT 34897
|||||||||||||| || ||||||||| | || | |||||||| || | || || |
Sbjct 9866 CCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATTCCCTCCTTATCTTGGATCTTGGCT 9807
Query 34898 TTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGG 34957
||||| | | || | ||| ||||||||| || | || |||||||| || || | |
Sbjct 9806 TTGACATTTTCGATGGTGTCAGAGGCCTCGACCTCGAGAGTGATGGTCTTGCCAGTCAAG 9747
Query 34958 GTCTTTACAAAGATCTGCAT 34977
||||| || || ||||||||
Sbjct 9746 GTCTTGACGAAAATCTGCAT 9727
>seq6645
Length=21841
Score = 82.4 bits (90), Expect = 5e-11
Identities = 107/146 (73%), Gaps = 4/146 (3%)
Strand=Plus/Plus
Query 34834 CTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTT 34893
||| ||||||||||| || || ||||| || | || | ||||||||||| | || ||
Sbjct 8966 CTTACCGGCGAAGATAAGGCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCTTGGATCTT 9025
Query 34894 TTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951
|| || || || |||| ||| ||||||||| || | || |||||||| |||
Sbjct 9026 GGCCTTCAC--ATTCTCGATCGTGTCAGAGGCCTCGACCTCGAGCGTGATGGTCTTACCC 9083
Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||||| || || || ||||||||
Sbjct 9084 GTGAGGGTTTTGACGAAAATCTGCAT 9109
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325662989948690
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