Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_022749.1
Length=39758
Score E
Sequences producing significant alignments: (Bits) Value
seq398 197 4e-46
>seq398
Length=1122
Score = 197 bits (218), Expect = 4e-46
Identities = 310/442 (70%), Gaps = 4/442 (1%)
Strand=Plus/Plus
Query 18688 GATGTAATCAAAAATATCACCGCGAGCTTCTTCTCGCGTTCCGTAGATCTTTTTCTTTAT 18747
||||||||| |||||||||| || |||||||| || ||| |||||||||| ||
Sbjct 1 GATGTAATCGAAAATATCACTTCGGGCTTCTTCACGGGTTGTGTAGATCTTTCGTCGGAT 60
Query 18748 CCGTTCACGTTTCAGTAGCTGGAAAAAACTTTCTGCGACTGCGTTGTCATGACAGTTACC 18807
|| || || |||| ||||||||||| || || || || || ||||| || ||||| ||
Sbjct 61 TCGCTCTCGCTTCAAAAGCTGGAAAAAGCTCTCGGCTACGGCATTGTCGTGGCAGTTTCC 120
Query 18808 GCGACGGCTCATACTGCCCTCCAGCCCGTGTGATTTCAGGAACGACTGCCACTCATAGCT 18867
|| |||||||| |||| | || | |||| || | ||| || ||||
Sbjct 121 CCGCCGGCTCATGCTGCTGATTACATTGTTGGCCTTCAAAAAGCTTTTCCAATCCGAGCT 180
Query 18868 TGTGTACTGACTGCCTTGATCAGAATGAACCAGCACCTGCTTTTGAGGATTACGTCGCCA 18927
|| |||||||||||||||| || |||| || || |||| ||||| || ||||||||
Sbjct 181 ACTGAACTGACTGCCTTGATCTGAGTGAATCATAACTTGCTGCTGAGGCTTGCGTCGCCA 240
Query 18928 CACGGCCATCAGAAGTGCATTCAGGACAATATCCTTTGTCATCCGGGGCTGCATTGACCA 18987
|| ||||||| | || | | | | || | ||||| |||| |||||||||
Sbjct 241 AACAGCCATCAACATCGCGTCGATAGCCAGGTCGCTGCACATCCTTGGCTTCATTGACCA 300
Query 18988 GCCAATAACTTTGCGCGAGAACAGGTCAACAACCACAGCCAGATACAGCCAGCCTTCGTG 19047
||||| |||| ||| |||||||| || | || || || || || ||||| ||||| |
Sbjct 301 ACCAATTACTTGGCGTGAGAACAGATCCAGCACTACCGCGAGGTAGAGCCACCCTTCATA 360
Query 19048 AGTCCGGATGTAGGTGATGTCCGTTACCCAACGCTCATCCGG--TGCTTCCGAGTTGAAC 19105
|| |||||||| ||||| || || ||||| || | ||| ||| | ||||||
Sbjct 361 GGTGCGGATGTAAGTGATATCTGTCACCCAGACCTTGTTCGGCTCACTTAC--CTTGAAC 418
Query 19106 TGCCGCTGGAGCCTGTTGGGCG 19127
|||||| ||| ||||||||
Sbjct 419 TGCCGCGCGAGGTGGTTGGGCG 440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127092664706400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |