Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq398 197 4e-46 >seq398 Length=1122 Score = 197 bits (218), Expect = 4e-46 Identities = 310/442 (70%), Gaps = 4/442 (1%) Strand=Plus/Plus Query 18688 GATGTAATCAAAAATATCACCGCGAGCTTCTTCTCGCGTTCCGTAGATCTTTTTCTTTAT 18747 ||||||||| |||||||||| || |||||||| || ||| |||||||||| || Sbjct 1 GATGTAATCGAAAATATCACTTCGGGCTTCTTCACGGGTTGTGTAGATCTTTCGTCGGAT 60 Query 18748 CCGTTCACGTTTCAGTAGCTGGAAAAAACTTTCTGCGACTGCGTTGTCATGACAGTTACC 18807 || || || |||| ||||||||||| || || || || || ||||| || ||||| || Sbjct 61 TCGCTCTCGCTTCAAAAGCTGGAAAAAGCTCTCGGCTACGGCATTGTCGTGGCAGTTTCC 120 Query 18808 GCGACGGCTCATACTGCCCTCCAGCCCGTGTGATTTCAGGAACGACTGCCACTCATAGCT 18867 || |||||||| |||| | || | |||| || | ||| || |||| Sbjct 121 CCGCCGGCTCATGCTGCTGATTACATTGTTGGCCTTCAAAAAGCTTTTCCAATCCGAGCT 180 Query 18868 TGTGTACTGACTGCCTTGATCAGAATGAACCAGCACCTGCTTTTGAGGATTACGTCGCCA 18927 || |||||||||||||||| || |||| || || |||| ||||| || |||||||| Sbjct 181 ACTGAACTGACTGCCTTGATCTGAGTGAATCATAACTTGCTGCTGAGGCTTGCGTCGCCA 240 Query 18928 CACGGCCATCAGAAGTGCATTCAGGACAATATCCTTTGTCATCCGGGGCTGCATTGACCA 18987 || ||||||| | || | | | | || | ||||| |||| ||||||||| Sbjct 241 AACAGCCATCAACATCGCGTCGATAGCCAGGTCGCTGCACATCCTTGGCTTCATTGACCA 300 Query 18988 GCCAATAACTTTGCGCGAGAACAGGTCAACAACCACAGCCAGATACAGCCAGCCTTCGTG 19047 ||||| |||| ||| |||||||| || | || || || || || ||||| ||||| | Sbjct 301 ACCAATTACTTGGCGTGAGAACAGATCCAGCACTACCGCGAGGTAGAGCCACCCTTCATA 360 Query 19048 AGTCCGGATGTAGGTGATGTCCGTTACCCAACGCTCATCCGG--TGCTTCCGAGTTGAAC 19105 || |||||||| ||||| || || ||||| || | ||| ||| | |||||| Sbjct 361 GGTGCGGATGTAAGTGATATCTGTCACCCAGACCTTGTTCGGCTCACTTAC--CTTGAAC 418 Query 19106 TGCCGCTGGAGCCTGTTGGGCG 19127 |||||| ||| |||||||| Sbjct 419 TGCCGCGCGAGGTGGTTGGGCG 440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127092664706400