Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_022772.1 Length=156338 Score E Sequences producing significant alignments: (Bits) Value seq2257 105 7e-18 >seq2257 Length=8409 Score = 105 bits (116), Expect = 7e-18 Identities = 281/424 (66%), Gaps = 8/424 (2%) Strand=Plus/Plus Query 104948 CCAACACCCATCATGTCCGGCGTTCGTACCCCAACCCGCCAATTCAGTTCTTGTGTTCTT 105007 || || ||||||||| | ||||| || || || || ||||| ||||| ||||| || || Sbjct 5485 CCCACGCCCATCATGGCTGGCGTGCGCACACCCACTCGCCAGTTCAGCTCTTGCGTGCTG 5544 Query 105008 ATCAAAACCGGTGACACTTTGGACTCAATCAATGCTACAGCCAAAAGTATTGTTGATTAT 105067 ||| || | |||| ||||| |||||||| || ||| |||||| ||| Sbjct 5545 ATCGAATGTGACGACAGCCTGGACAGCATCAATGCCACGACCAGCGCCATTGTTCGTTAC 5604 Query 105068 GTATCCAAACGCGCTGGGATCGGATTTGATGTCGGAGCAATTCGTGGCATCGGTAGCCCT 105127 || || | || || || ||||| | ||| || ||||| | | | || ||| Sbjct 5605 GTGTCACAGCGTGCCGGTATCGGTATCAATGGTGGCCGCATTCGCGCCGTAGGCAGCGAA 5664 Query 105128 ATCCGAAAAGGTGAAATGGTGCACACAGGTCTGGTTCCTTTCATAAA-ATAT--CTGACT 105184 || || |||||| ||||| ||| | || ||| | || || | | | || Sbjct 5665 ATTCGTGGTGGTGAAGCACAACACACGGGTTGCCTGCCGTTCTTCAAGATGTTCCAGGCT 5724 Query 105185 GGGGCATTAAAGTCTTGCTCTCAAGGCGGTATTCGTGGCGGATCAGCAAC-TTGCTATAT 105243 | || | ||||| ||||| |||||||| | ||||| || | ||||| ||| | || Sbjct 5725 GCGG---TGAAGTCCTGCTCGCAAGGCGGCGTGCGTGGTGGTGCGGCAACCTTGTTCTAC 5781 Query 105244 CCCTATCTGGCATTATCAATTTGATGATGTTGTGGTCCTGAAGAACAACCGTGGTCTTGA 105303 ||| || ||||| || | || | |||| |||||||||||||||||| | || Sbjct 5782 CCC-ATGTGGCACCTGGAAGTGGAAACACTGCTGGTTCTGAAGAACAACCGTGGTGTGGA 5840 Query 105304 AGAGAACCGTGAACGCCGTATCGACTATGGTATTCAGATCAACCGCGTCATGTTCGAACG 105363 ||| |||||| || | | ||||| ||| |||||||||||||| | ||| | | || Sbjct 5841 AGAAAACCGTATTCGTCACTTGGACTACGGTGTTCAGATCAACCGCTTGCTGTACCAGCG 5900 Query 105364 TCTG 105367 ||| Sbjct 5901 CCTG 5904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500106648080800